Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0421
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 407 CHDCGSSIQQHLRFGYRLHRICS 475
           CH C S+IQ+  + G  +H+I +
Sbjct: 926 CHVCYSTIQEVSKSGELIHKIAT 948



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 407 CHDCGSSIQQHLRFGYRLHRICSGIQLQKHRQRQK-QIYSWKLSRTRGGLS 556
           CH C S+I +  + G  +H+    I+   H    K +++S ++   R G S
Sbjct: 650 CHVCCSTIHEVSKAGELIHK----IETNDHEIIDKIEMFSLQILNERAGFS 696


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
 Frame = +1

Query: 400  SSVPRLREFHSTASSFWLPTTQNMLWYTVA----ETSTAPETNLQLETQQNTRW 549
            SS   +    +T  S W  +T    W+T       T+T P T         T W
Sbjct: 1026 SSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNW 1079



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +1

Query: 355  QLRYRPQQYLLMEEESSVPRLREFHSTASSFWLPTTQNMLWYTVAETSTA 504
            QL+  P      ++    P   E H  ASS   P+T  M+      T+T+
Sbjct: 2261 QLQVCPNGLFWNKDHCDWPENTECHPDASSTMAPSTTPMVPDKPVTTTTS 2310


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 362 RSCELSFGPDNTLYD 318
           R CE S  P N +YD
Sbjct: 557 RDCEESLQPCNPIYD 571


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,802
Number of Sequences: 336
Number of extensions: 3190
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)