Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0421
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 43 0.001
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 43 0.001
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 43 0.001
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 43 0.001
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 43 0.001
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 43 0.001
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 43 0.001
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 32 1.3
Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finge... 31 3.1
BC117387-1|AAI17388.1| 935|Homo sapiens BRPF3 protein protein. 31 3.1
BC033652-1|AAH33652.2| 602|Homo sapiens BRPF3 protein protein. 31 3.1
AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein. 31 3.1
AF170025-1|AAF24219.1| 839|Homo sapiens zinc finger protein ZFP... 30 7.1
AC005020-3|AAS02018.1| 654|Homo sapiens unknown protein. 30 7.1
AB023232-1|BAA76859.2| 841|Homo sapiens KIAA1015 protein protein. 30 7.1
X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for ... 29 9.4
BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein... 29 9.4
AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein... 29 9.4
AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein... 29 9.4
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +3
Query: 243 QIPVNLQNGQCAATDYTVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAG 422
+IP +NG+C +Y++ V+ +R + I P N +
Sbjct: 51 KIPTTFENGRCIQANYSLMENGKIKVLNQELRADGT-VNQIEGEATPVNLTEPAKLEVKF 109
Query: 423 ---VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 110 SWFMPSAPYWILATDYENYALVYSC 134
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 32.3 bits (70), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 423 VPFNSIFVLATDYTEYALVYSC 488
+P ++LATDY YALVYSC
Sbjct: 22 MPSAPYWILATDYENYALVYSC 43
>Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finger
containing, 3 protein.
Length = 1205
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +2
Query: 452 YRLHRICSGIQLQKHRQRQKQIYS-WKLSR-TRGGL 553
YRL++ICSG+ Q+ Q +++++ W L R R G+
Sbjct: 482 YRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV 517
>BC117387-1|AAI17388.1| 935|Homo sapiens BRPF3 protein protein.
Length = 935
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +2
Query: 452 YRLHRICSGIQLQKHRQRQKQIYS-WKLSR-TRGGL 553
YRL++ICSG+ Q+ Q +++++ W L R R G+
Sbjct: 482 YRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV 517
>BC033652-1|AAH33652.2| 602|Homo sapiens BRPF3 protein protein.
Length = 602
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +2
Query: 452 YRLHRICSGIQLQKHRQRQKQIYS-WKLSR-TRGGL 553
YRL++ICSG+ Q+ Q +++++ W L R R G+
Sbjct: 458 YRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV 493
>AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.
Length = 1214
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +2
Query: 452 YRLHRICSGIQLQKHRQRQKQIYS-WKLSR-TRGGL 553
YRL++ICSG+ Q+ Q +++++ W L R R G+
Sbjct: 491 YRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV 526
>AF170025-1|AAF24219.1| 839|Homo sapiens zinc finger protein ZFP-95
protein.
Length = 839
Score = 29.9 bits (64), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 395 RSHQCHDCGS--SIQQHLRFGYRLH 463
+SHQCH+CG +++ HL R+H
Sbjct: 771 KSHQCHECGRGFTLKSHLNQHQRIH 795
>AC005020-3|AAS02018.1| 654|Homo sapiens unknown protein.
Length = 654
Score = 29.9 bits (64), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 395 RSHQCHDCGS--SIQQHLRFGYRLH 463
+SHQCH+CG +++ HL R+H
Sbjct: 586 KSHQCHECGRGFTLKSHLNQHQRIH 610
>AB023232-1|BAA76859.2| 841|Homo sapiens KIAA1015 protein protein.
Length = 841
Score = 29.9 bits (64), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 395 RSHQCHDCGS--SIQQHLRFGYRLH 463
+SHQCH+CG +++ HL R+H
Sbjct: 773 KSHQCHECGRGFTLKSHLNQHQRIH 797
>X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for
retinol binding protein (RBP). ).
Length = 199
Score = 29.5 bits (63), Expect = 9.4
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 QNGQCAATDY-TVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAGVPFNS 437
+ GQ +AT VR N++ V +V T FT + A GV S G +
Sbjct: 65 ETGQMSATAKGRVRLLNNWDVCADMVGT---FTDTEDPAKFKMKYWGVASFLQKGN--DD 119
Query: 438 IFVLATDYTEYALVYSCR--NID 500
+++ TDY YA+ YSCR N+D
Sbjct: 120 HWIVDTDYDTYAVQYSCRLLNLD 142
>BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 29.5 bits (63), Expect = 9.4
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 QNGQCAATDY-TVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAGVPFNS 437
+ GQ +AT VR N++ V +V T FT + A GV S G +
Sbjct: 67 ETGQMSATAKGRVRLLNNWDVCADMVGT---FTDTEDPAKFKMKYWGVASFLQKGN--DD 121
Query: 438 IFVLATDYTEYALVYSCR--NID 500
+++ TDY YA+ YSCR N+D
Sbjct: 122 HWIVDTDYDTYAVQYSCRLLNLD 144
>AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 199
Score = 29.5 bits (63), Expect = 9.4
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 QNGQCAATDY-TVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAGVPFNS 437
+ GQ +AT VR N++ V +V T FT + A GV S G +
Sbjct: 65 ETGQMSATAKGRVRLLNNWDVCADMVGT---FTDTEDPAKFKMKYWGVASFLQKGN--DD 119
Query: 438 IFVLATDYTEYALVYSCR--NID 500
+++ TDY YA+ YSCR N+D
Sbjct: 120 HWIVDTDYDTYAVQYSCRLLNLD 142
>AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 29.5 bits (63), Expect = 9.4
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +3
Query: 261 QNGQCAATDY-TVRSQNSFSVVQSIVRTERQFTTSIPSATVPANGRGVISATIAGVPFNS 437
+ GQ +AT VR N++ V +V T FT + A GV S G +
Sbjct: 67 ETGQMSATAKGRVRLLNNWDVCADMVGT---FTDTEDPAKFKMKYWGVASFLQKGN--DD 121
Query: 438 IFVLATDYTEYALVYSCR--NID 500
+++ TDY YA+ YSCR N+D
Sbjct: 122 HWIVDTDYDTYAVQYSCRLLNLD 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,851,931
Number of Sequences: 237096
Number of extensions: 1901248
Number of successful extensions: 6817
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6809
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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