Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0420
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1369 + 29620958-29621030,29622421-29622452,29622538-296225...    28   5.3  
02_05_0735 + 31322033-31322201,31322702-31322795,31322902-313229...    27   9.3  

>06_03_1369 +
           29620958-29621030,29622421-29622452,29622538-29622598,
           29622695-29622711,29622916-29623250,29623329-29623686,
           29623784-29624371,29624664-29624939
          Length = 579

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 309 ISIKSVYFPSLLSPRQIILWSKRTDIKLENF 217
           +++       L S +Q++ WS + +IKL+NF
Sbjct: 20  VAVTGAQVDPLYSSKQVLDWSSQANIKLQNF 50


>02_05_0735 +
           31322033-31322201,31322702-31322795,31322902-31322954,
           31323560-31323915,31324183-31324394,31324761-31325043
          Length = 388

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 45  ILKINLPRSQRKEAVSPHYVGTCVSTKIKMEPELN 149
           I++  L R++ + A+S HY  TCVS ++     LN
Sbjct: 313 IVEYFLWRNKAEYAISVHYDRTCVSEEVLQNKRLN 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,262,852
Number of Sequences: 37544
Number of extensions: 322760
Number of successful extensions: 550
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)