Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0416
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   1.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -2

Query: 127 ILFLKECERYMSRSSFMSLSVAWRLPDTLPDR 32
           + F+   +  +    F  L +AW  P+T P +
Sbjct: 125 LAFVNSAQALVKNFGFDGLDLAWEFPETKPKK 156


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
 Frame = -1

Query: 464 TGSEPCPSPGWRLSA*SPL------PQCT 396
           TG  PC   G RL + +PL      PQCT
Sbjct: 53  TGEAPCDPVGRRLKSLAPLVLRGSCPQCT 81


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 30  YLSGSVSGSLQATDRLMKELRDIYRSHSFKNNM--YSIELVNDSL 158
           Y   S       T  ++ ELR+ Y     +NN+  YS++L++  +
Sbjct: 308 YACASTCEQANDTPSILHELRNNYFHMDLENNVQSYSLQLLHQKV 352


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -3

Query: 564  EPAIFLMYLNKTFEALLCTARLY*VCETTLVALNWIRA 451
            E  ++L  +  +F  ++C A ++ +C      +  +RA
Sbjct: 988  EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRA 1025


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 676 MLTRSQLSLILTW*LRWA*QIVT 608
           ++  +Q SL+LT+ +RW  Q  T
Sbjct: 277 VVKEAQKSLVLTYEMRWYCQTAT 299


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = -3

Query: 564 EPAIFLMYLNKTFEALLCTARLY*VCETTLVALNWIRA 451
           E  ++L  +  +F  ++C A ++ +C      +  +RA
Sbjct: 269 EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRA 306


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 337 CISRRCDMYGAIN 375
           C  + CDM GAIN
Sbjct: 238 CHDQLCDMCGAIN 250


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 337 CISRRCDMYGAINEARLVIRVHC 405
           C+S  C   G ++  +LV   HC
Sbjct: 302 CLSNPCSNAGTLDCVQLVNDYHC 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,860
Number of Sequences: 336
Number of extensions: 4546
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)