Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0416
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 106 1e-23
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 50 1e-06
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 50 1e-06
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 41 8e-04
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 40 0.002
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 40 0.002
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 37 0.017
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 36 0.040
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 35 0.069
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 34 0.091
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 33 0.28
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 33 0.28
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 31 1.1
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 31 1.1
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 106 bits (255), Expect = 1e-23
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +2
Query: 269 FKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQIAATLVKG 448
F E +P +PPFVRVV P I+ G+VL GGAICMELLTKQGWSSAY++E+ I+QIAATLVKG
Sbjct: 285 FNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSIESCILQIAATLVKG 344
Query: 449 KARIQFSA 472
+ARI F A
Sbjct: 345 RARISFDA 352
Score = 80.6 bits (190), Expect = 1e-15
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 21 RQDYLSGSVSGSLQATDRLMKELRDIYRSHSFKNNMYSIEL-VNDSLYEWNIRLRSVDPD 197
RQ +L G V GS+ ATDRLMKE+RDI+RS FKN +Y+ EL ++LY+W I+L VD D
Sbjct: 201 RQQHLDGKVQGSITATDRLMKEIRDIHRSEHFKNGIYTFELEKEENLYQWWIKLHKVDED 260
Query: 198 STLHNDXXXXXXXXGKDS-IFSTLYSRK 278
S L D +D +FS ++ K
Sbjct: 261 SPLFEDMKKLKKDHNQDHLLFSFTFNEK 288
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 487 TDSVQSGRAQQSFKCLVQIHEKNGWFTPPKEDG 585
T + RAQQSFK L QIH K+GW+TPPK +G
Sbjct: 355 TSTYSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 106 bits (255), Expect = 1e-23
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +2
Query: 269 FKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQIAATLVKG 448
F E +P +PPFVRVV P I+ G+VL GGAICMELLTKQGWSSAY++E+ I+QIAATLVKG
Sbjct: 285 FNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSIESCILQIAATLVKG 344
Query: 449 KARIQFSA 472
+ARI F A
Sbjct: 345 RARISFDA 352
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 21 RQDYLSGSVSGSLQATDRLMKELRDIYRSHSFKNNMYSIEL-VNDSLYEWNIRLRSVDPD 197
RQ +L G V GS+ A+DRLMKE+RDI+RS FKN +Y+ EL ++LY+W I+L VD D
Sbjct: 201 RQQHLDGKVQGSITASDRLMKEIRDIHRSEHFKNGIYTFELEKEENLYQWWIKLHKVDED 260
Query: 198 STLHNDXXXXXXXXGKDS-IFSTLYSRK 278
S L D +D +FS ++ K
Sbjct: 261 SPLFEDMKKLKKDHNQDHLLFSFTFNEK 288
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 487 TDSVQSGRAQQSFKCLVQIHEKNGWFTPPKEDG 585
T + RAQQSFK L QIH K+GW+TPPK +G
Sbjct: 355 TSTYSMARAQQSFKSLQQIHAKSGWYTPPKTEG 387
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +2
Query: 197 QYTTQRPPPAERKGGKRLYFLNIIFKETYPFEPPFV----RVVYPIISGGYVLVGGAICM 364
Q T PP + +GG ++FL I F YPF+PP V R+ +P I+ G+IC+
Sbjct: 34 QATIMGPPESPYQGG--VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-----NGSICL 86
Query: 365 ELLTKQGWSSAYTVEAVIMQIAATL 439
++L Q WS A T+ V++ I + L
Sbjct: 87 DILRSQ-WSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +2
Query: 197 QYTTQRPPPAERKGGKRLYFLNIIFKETYPFEPPFV----RVVYPIISGGYVLVGGAICM 364
Q T PP + +GG ++FL I F YPF+PP V R+ +P I+ G+IC+
Sbjct: 34 QATIMGPPESPYQGG--VFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-----NGSICL 86
Query: 365 ELLTKQGWSSAYTVEAVIMQIAATL 439
++L Q WS A T+ V++ I + L
Sbjct: 87 DILRSQ-WSPALTISKVLLSICSLL 110
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 215 PPPAERKGGKRLYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSS 394
PP GG ++ L+I + YPF PP V+ I G IC+++L K W++
Sbjct: 46 PPDTPYAGG--MFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL-KDQWAA 102
Query: 395 AYTVEAVIMQIAATL 439
+ T+ V++ I A +
Sbjct: 103 SLTLRTVLLSIQALM 117
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 257 LNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQIAAT 436
L++ F E YP +PP V+ + + V G+IC+++L + WS Y V A++ I +
Sbjct: 55 LSLEFTEEYPNKPPTVKFISKMFHPN-VYADGSICLDILQNR-WSPTYDVAAILTSIQSL 112
Query: 437 L 439
L
Sbjct: 113 L 113
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 257 LNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQIAAT 436
L++ F E YP +PP V+ + + V G+IC+++L + WS Y V A++ I +
Sbjct: 55 LSLEFTEEYPNKPPTVKFISKMFHPN-VYADGSICLDILQNR-WSPTYDVAAILTSIQSL 112
Query: 437 L 439
L
Sbjct: 113 L 113
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 RLYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAI-CMELLTKQGWSSAYTVEAVIM 421
R+Y L I YP EPP VR + G G I L T + WS++Y ++ V+
Sbjct: 56 RIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLE 115
Query: 422 QIAATLVKGKARIQ 463
I ++ K ++
Sbjct: 116 DIRKNMMMAKENLK 129
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 35.5 bits (78), Expect = 0.040
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 200 YTTQRPPPAERKGGKRLYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMEL--L 373
Y + P GG Y+ +IFKE +P+ PP + ++ P G +C+ +
Sbjct: 53 YCLRGSPDTPFYGG--YYWGKVIFKENFPWSPPAITMITP---NGRFQTNTRLCLSISDY 107
Query: 374 TKQGWSSAYTVEAVIMQIAATLVKGKARIQFSATKVVSQTQYSLAVHSRASNVLFRYMRK 553
+ W+ +TV A+++ + + + + A Q Y+ A S+ NV Y
Sbjct: 108 HPESWNPGWTVSAILIGLHSFMNENSPAAGSIAGTPQDQRMYAAA--SKEFNVKV-YNWN 164
Query: 554 MAGS 565
+AG+
Sbjct: 165 LAGN 168
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 34.7 bits (76), Expect = 0.069
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +2
Query: 248 LYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQI 427
++ L + YPF+PP+++ + + V +C +L ++ W T+E V++ +
Sbjct: 61 IFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNL 120
Query: 428 AATL 439
L
Sbjct: 121 IVLL 124
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 221 PAERKGGKRLYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAY 400
P + K + + I F YPF+PP V I V G C+ ++T + W A
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPN-VDEEGKFCLPIVTAENWKPAT 99
Query: 401 TVEAVIMQIAATL 439
E V+M + + +
Sbjct: 100 KTEQVMMALLSLI 112
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 LYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTK-QGWSSAYTVEAVIMQ 424
LY + ++FK+ +P PP + P+ V G +C+ LL + + W + +++ +++
Sbjct: 57 LYRIRMLFKDDFPSTPPKCKFEPPLFHPN-VYPSGTVCLSLLDENKDWKPSISIKQLLIG 115
Query: 425 I 427
I
Sbjct: 116 I 116
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 LYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTK-QGWSSAYTVEAVIMQ 424
LY + ++FK+ +P PP + P+ V G +C+ LL + + W + +++ +++
Sbjct: 57 LYRIRMLFKDDFPSTPPKCKFEPPLFHPN-VYPSGTVCLSLLDENKDWKPSISIKQLLIG 115
Query: 425 I 427
I
Sbjct: 116 I 116
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 248 LYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQI 427
++ L+I E+YPF+ P V+ + I G IC+ + W + T+ V++ I
Sbjct: 397 IFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMTIYKVLIVI 456
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 218 PPAERKGGKRLYFLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMEL--LTKQGWS 391
P +GG +Y ++F + +PF+PP + ++ P G +C+ + W+
Sbjct: 48 PKTPYEGG--IYMGKLLFPKDFPFKPPAILMLTP---NGRFQTNTRLCLSISDYHPDTWN 102
Query: 392 SAYTVEAVI 418
A+TV +I
Sbjct: 103 PAWTVSTII 111
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical
protein R06C7.8 protein.
Length = 987
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 229 KKRREKTLFSQHYIQGNLSIRAAFCACCLSYNLRRLCISR 348
KKRR F QH + N S +AAF +LR+ CI R
Sbjct: 175 KKRRSSVCFLQHNVPINNSGKAAF-GPKTKTDLRQACIDR 213
>AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical
protein C18G1.6 protein.
Length = 464
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 638 VVTLGVTNRYTALRSSNYPSSFGGVNQPFF 549
V L N Y A+ S Y + F GV++P F
Sbjct: 299 VGALSFGNNYVAMEPSIYDNGFSGVSEPVF 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,665,407
Number of Sequences: 27780
Number of extensions: 423158
Number of successful extensions: 1017
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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