Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0414
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 160 2e-38
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 155 8e-37
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 153 3e-36
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 145 9e-34
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 139 6e-32
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 132 7e-30
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 132 9e-30
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 131 1e-29
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 126 4e-28
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 118 1e-25
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 117 3e-25
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 114 1e-24
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 114 1e-24
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 111 1e-23
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 111 1e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 109 4e-23
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 109 5e-23
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 108 9e-23
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 105 9e-22
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 105 9e-22
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 104 2e-21
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 101 1e-20
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 101 1e-20
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 101 2e-20
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 100 2e-20
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 100 3e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 100 3e-20
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 100 3e-20
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 99 4e-20
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 100 6e-20
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 100 6e-20
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 100 6e-20
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 98 1e-19
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 98 1e-19
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 98 2e-19
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 98 2e-19
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 97 2e-19
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 97 3e-19
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 3e-19
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 95 9e-19
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 95 1e-18
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 94 2e-18
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 94 3e-18
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 93 4e-18
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 93 7e-18
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 93 7e-18
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 93 7e-18
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 93 7e-18
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 92 9e-18
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 92 1e-17
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 92 1e-17
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 91 2e-17
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 91 2e-17
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 90 4e-17
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 90 4e-17
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 90 5e-17
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 90 5e-17
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 89 6e-17
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 89 6e-17
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 89 8e-17
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 89 1e-16
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 88 1e-16
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 88 1e-16
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 88 1e-16
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 88 1e-16
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 88 1e-16
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 88 2e-16
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 88 2e-16
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 88 2e-16
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 88 2e-16
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 87 2e-16
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 87 2e-16
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 87 2e-16
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 87 3e-16
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 87 3e-16
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 87 3e-16
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 86 8e-16
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 85 1e-15
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 85 1e-15
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 85 1e-15
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 85 1e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 85 1e-15
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 85 1e-15
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 85 1e-15
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 85 2e-15
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 2e-15
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 85 2e-15
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 85 2e-15
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 84 2e-15
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 84 2e-15
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 84 2e-15
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 83 4e-15
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 83 4e-15
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 83 4e-15
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 83 4e-15
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 83 4e-15
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 83 5e-15
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 83 5e-15
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 83 5e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 83 5e-15
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 83 5e-15
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 83 7e-15
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 83 7e-15
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 83 7e-15
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 83 7e-15
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 82 9e-15
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 82 9e-15
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 9e-15
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 82 1e-14
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 82 1e-14
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 82 1e-14
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 81 2e-14
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 81 2e-14
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 81 2e-14
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 81 2e-14
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 81 2e-14
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 81 2e-14
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 81 2e-14
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 81 2e-14
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 81 3e-14
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 81 3e-14
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 81 3e-14
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 81 3e-14
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 81 3e-14
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 81 3e-14
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 80 5e-14
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 80 5e-14
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 80 5e-14
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 80 5e-14
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 5e-14
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 80 5e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 79 7e-14
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 79 7e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 79 7e-14
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 79 7e-14
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 79 9e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 79 9e-14
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 79 9e-14
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 9e-14
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 1e-13
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 78 2e-13
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 78 2e-13
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 78 2e-13
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 78 2e-13
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 77 3e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 77 3e-13
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 77 3e-13
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 77 3e-13
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 77 4e-13
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 77 5e-13
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 5e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 77 5e-13
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 77 5e-13
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 77 5e-13
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 77 5e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 77 5e-13
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 5e-13
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 77 5e-13
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 77 5e-13
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 76 6e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 76 6e-13
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 76 6e-13
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 76 6e-13
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 76 6e-13
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 76 6e-13
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 76 6e-13
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 76 6e-13
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 76 6e-13
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 76 8e-13
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 76 8e-13
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 76 8e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 76 8e-13
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 76 8e-13
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 76 8e-13
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 76 8e-13
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 76 8e-13
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 1e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 75 1e-12
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 75 1e-12
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 75 1e-12
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 75 1e-12
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 75 1e-12
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 75 1e-12
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 75 1e-12
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 75 1e-12
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 75 1e-12
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 75 1e-12
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 75 1e-12
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 75 2e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 2e-12
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 75 2e-12
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 75 2e-12
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 75 2e-12
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 74 2e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 74 2e-12
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 2e-12
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 74 2e-12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 74 3e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 74 3e-12
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 74 3e-12
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 74 3e-12
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 74 3e-12
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 74 3e-12
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 74 3e-12
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 73 4e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 73 4e-12
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 4e-12
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 73 4e-12
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 73 4e-12
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 73 4e-12
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 73 4e-12
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 6e-12
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 73 6e-12
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 73 6e-12
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 73 6e-12
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 73 6e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 73 6e-12
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 8e-12
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 73 8e-12
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 73 8e-12
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 73 8e-12
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 73 8e-12
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 73 8e-12
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 73 8e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 73 8e-12
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 72 1e-11
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 72 1e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 72 1e-11
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 72 1e-11
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 72 1e-11
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 72 1e-11
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 72 1e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 71 2e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 71 2e-11
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 71 2e-11
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 71 2e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 71 2e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 71 2e-11
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 71 2e-11
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 71 2e-11
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 71 2e-11
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 71 2e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 71 2e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 71 2e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 2e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 71 3e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 71 3e-11
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 71 3e-11
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 71 3e-11
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 70 4e-11
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 70 4e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 70 4e-11
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 70 4e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 70 5e-11
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 70 5e-11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 70 5e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 70 5e-11
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 5e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 70 5e-11
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 70 5e-11
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 70 5e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 70 5e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 69 7e-11
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 69 7e-11
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 7e-11
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 7e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 69 7e-11
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 69 7e-11
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 69 7e-11
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 7e-11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 69 9e-11
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 69 9e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 69 9e-11
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 69 9e-11
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 69 9e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 1e-10
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 69 1e-10
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 1e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 69 1e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 69 1e-10
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 68 2e-10
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 68 2e-10
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 2e-10
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 68 2e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 68 2e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 68 2e-10
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 68 2e-10
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 68 2e-10
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 68 2e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 2e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 3e-10
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 67 3e-10
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 67 3e-10
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 67 3e-10
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 67 3e-10
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 67 3e-10
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 67 4e-10
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 67 4e-10
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 4e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 67 4e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 67 4e-10
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 67 4e-10
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 67 4e-10
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 67 4e-10
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 66 5e-10
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 66 5e-10
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 66 5e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 66 5e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 66 5e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 66 7e-10
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 66 7e-10
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 66 7e-10
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 66 7e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 66 7e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 66 9e-10
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 66 9e-10
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 66 9e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 9e-10
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 66 9e-10
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 65 1e-09
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 65 1e-09
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 65 1e-09
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 65 1e-09
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 65 1e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 65 1e-09
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 65 1e-09
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 65 2e-09
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 65 2e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 65 2e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 65 2e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 65 2e-09
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 65 2e-09
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 65 2e-09
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 65 2e-09
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 2e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 64 2e-09
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 64 2e-09
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 64 2e-09
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 64 2e-09
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 64 2e-09
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 64 2e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 2e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 64 2e-09
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 64 3e-09
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 64 3e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 64 3e-09
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 64 3e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 64 3e-09
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 64 3e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 64 3e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 3e-09
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 64 3e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 64 3e-09
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 64 3e-09
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 64 3e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 64 3e-09
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 63 5e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 63 5e-09
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 63 5e-09
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 63 5e-09
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 63 6e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 63 6e-09
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 63 6e-09
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 63 6e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 63 6e-09
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 63 6e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 63 6e-09
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 62 8e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 62 8e-09
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 8e-09
UniRef50_A5AUZ1 Cluster: Putative uncharacterized protein; n=1; ... 62 8e-09
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 62 8e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 62 8e-09
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 62 8e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 62 1e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 62 1e-08
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 62 1e-08
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 62 1e-08
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 62 1e-08
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 62 1e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 62 1e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 61 2e-08
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 61 2e-08
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 61 2e-08
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 61 2e-08
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 2e-08
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 61 2e-08
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 61 2e-08
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 61 2e-08
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 60 3e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 60 3e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 60 3e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 60 3e-08
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 3e-08
UniRef50_Q4SYP5 Cluster: Chromosome undetermined SCAF11993, whol... 60 4e-08
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 60 4e-08
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 60 4e-08
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 60 4e-08
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 60 4e-08
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 60 6e-08
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 60 6e-08
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 60 6e-08
UniRef50_A0CA40 Cluster: Chromosome undetermined scaffold_160, w... 60 6e-08
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 60 6e-08
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 60 6e-08
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 60 6e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 59 8e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 59 8e-08
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 59 8e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 59 8e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 59 8e-08
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 59 8e-08
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 59 8e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 59 8e-08
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 59 1e-07
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 59 1e-07
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 59 1e-07
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 59 1e-07
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 59 1e-07
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 59 1e-07
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 59 1e-07
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 58 1e-07
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 58 1e-07
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 58 1e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 58 2e-07
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 2e-07
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 58 2e-07
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 160 bits (389), Expect = 2e-38
Identities = 77/110 (70%), Positives = 90/110 (81%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQQVA +FG ++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLIDFLE+GTT+L
Sbjct: 243 AQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSL 302
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
+RCTYLVLDEADRMLDMGFEPQIRK + + ++ PK+ R L
Sbjct: 303 KRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQL 352
Score = 124 bits (299), Expect = 2e-27
Identities = 59/94 (62%), Positives = 77/94 (81%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI++QIRPDRQ LMWSATWPKEV++LAE++L +YIQ+NIGSL LSANHNILQIVD+C E
Sbjct: 326 RKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDE 385
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
+EK KL LL +I S E KTII ++ ++++
Sbjct: 386 NEKLMKLIKLLTDI--SAENETKTIIFVETKKRV 417
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
FVETK++ + I+RNI R GW A +HGDK+QQERD VL S
Sbjct: 410 FVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSS 449
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 155 bits (376), Expect = 8e-37
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQQVA +FG +SYVRNTCVFGGAPK Q RDL+RG EIVIATPGRLIDFL G+TNL
Sbjct: 367 AQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNL 426
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+RCTYLVLDEADRMLDMGFEPQIRK +S+
Sbjct: 427 KRCTYLVLDEADRMLDMGFEPQIRKIVSQ 455
Score = 134 bits (324), Expect = 2e-30
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ QIRPDRQTLMWSATWPKEVK+LAED+LG+YIQINIGSL+LSANHNI Q+VD+C E
Sbjct: 450 RKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDE 509
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
KE KL LL +I + E K II ++ + ++
Sbjct: 510 FSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRV 543
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR+ +N+ R IR +G +HGDK+Q ERD VL
Sbjct: 536 FVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVL 573
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 153 bits (372), Expect = 3e-36
Identities = 76/110 (69%), Positives = 83/110 (75%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQQVA DFG NTCVFGGAPK Q RDLERG EIVIATPGRLIDFLE+G TNL
Sbjct: 208 AQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNL 267
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
+RCTYLVLDEADRMLDMGFEPQIRK + + ++ PK+ RNL
Sbjct: 268 RRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Score = 128 bits (310), Expect = 8e-29
Identities = 61/94 (64%), Positives = 76/94 (80%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ QIRPDRQ LMWSATWPKEV+ LAE++L DYIQINIGSL LSANHNILQIVD+C++
Sbjct: 291 RKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCED 350
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
+EK+ KL LL EI S E KTII ++ + ++
Sbjct: 351 YEKDQKLMKLLTEI--SAENETKTIIFVETKRRV 382
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR+ ++I+RNI R GW AV +HGDK+QQERD VL
Sbjct: 375 FVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVL 412
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 145 bits (351), Expect = 9e-34
Identities = 73/110 (66%), Positives = 81/110 (73%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQQV DFG + NTC+FGGA K QA DL RGVEIVIATPGRLIDFLE GTTNL
Sbjct: 187 AQQIQQVCNDFGRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNL 246
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
+R TYLVLDEADRMLDMGFEPQIRK +S+ ++ PK+ R L
Sbjct: 247 RRTTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKL 296
Score = 122 bits (295), Expect = 5e-27
Identities = 56/94 (59%), Positives = 77/94 (81%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KII QIRPDRQ LMWSATWPKE++KLAE++L +YIQINIGSL L+AN NI+QI++ C+E
Sbjct: 270 RKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQIIECCEE 329
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
+EKE +L LL E+ SQ+ +K+II ++ + K+
Sbjct: 330 YEKETRLFKLLTEL--SQQGDSKSIIFVETKRKV 361
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKRK + I+ I+R GW +HGDKTQ++RD VL
Sbjct: 354 FVETKRKVDQITNVIKRNGWRCDGIHGDKTQKDRDYVL 391
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 139 bits (336), Expect = 6e-32
Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 175
AQQIQ V DFG S +R TC+FGGA K Q RDLERGVE+VIATPGRLIDFLE+G T
Sbjct: 315 AQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGIT 374
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
NL+RCTYLVLDEADRMLDMGFEPQIRK + +
Sbjct: 375 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ 405
Score = 130 bits (315), Expect = 2e-29
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KIIEQIRPDRQ LMWSATWPKEV+ LAED+L DYIQINIGSL LSANHNI QIVD+C+E
Sbjct: 400 RKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEE 459
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
EKE KL LL+EI S + +K II ++ ++K+
Sbjct: 460 GEKEGKLLSLLKEI--SSDVNSKIIIFVETKKKV 491
Score = 49.2 bits (112), Expect = 8e-05
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+K E++ +NI R G+ A +HGDK+Q ERD VL
Sbjct: 484 FVETKKKVEDLLKNIVRDGYGATSIHGDKSQSERDYVL 521
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 132 bits (319), Expect = 7e-30
Identities = 60/92 (65%), Positives = 77/92 (83%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
IIEQIRPD QTLMWSATWP V +L +DYL DYIQIN+GSL+L+ANHNILQI+D+CQEHE
Sbjct: 258 IIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHE 317
Query: 436 KENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
KE KL++LL+EI +E KTII ++ ++++
Sbjct: 318 KEAKLSILLREIMAEKE--CKTIIFIETKKRV 347
Score = 131 bits (316), Expect = 2e-29
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI+QV DFG ++NTC+FGG KR+Q DL+ GVEIVIATPGRLIDFL TNL
Sbjct: 173 AQQIKQVTDDFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNL 232
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
+RC+YLVLDEADRMLDMGFEPQIR
Sbjct: 233 RRCSYLVLDEADRMLDMGFEPQIR 256
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +3
Query: 492 CENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
C+ F+ETK++ ++I+R + R GWPA+C+HGDK+Q+ER+ L S
Sbjct: 335 CKTIIFIETKKRVDDITRKVLRDGWPAMCIHGDKSQREREYTLNS 379
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 132 bits (318), Expect = 9e-30
Identities = 64/89 (71%), Positives = 72/89 (80%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQQ + FG S R+TC++GGAPK Q RDL RGVEIVIATPGRLID LE G TNL
Sbjct: 337 AVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNL 396
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+R TYLVLDEADRMLDMGFEPQIRK +++
Sbjct: 397 RRVTYLVLDEADRMLDMGFEPQIRKIVAQ 425
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ QIRPDRQTL WSATWP+EV+ LA +L + ++ IGS L ANH+I QI+++ E
Sbjct: 420 RKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISE 479
Query: 430 HEKENKLNVLLQEI 471
HEK +L+ LL ++
Sbjct: 480 HEKYPRLSKLLSDL 493
Score = 49.2 bits (112), Expect = 8e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TK+ + ++R +R GWPA+ +HGDK Q ERD VL
Sbjct: 502 FFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVL 539
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 131 bits (317), Expect = 1e-29
Identities = 62/89 (69%), Positives = 70/89 (78%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ FG +S +RNTCV+GG PK Q RDL RGVE+ IATPGRLID LE G TNL
Sbjct: 220 AVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNL 279
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+R TYLVLDEADRMLDMGFEPQIRK + +
Sbjct: 280 RRVTYLVLDEADRMLDMGFEPQIRKIIGQ 308
Score = 104 bits (250), Expect = 2e-21
Identities = 45/79 (56%), Positives = 65/79 (82%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KII QIRPDRQTLMWSATWPKEV+ LA D+L D+IQ+NIGS++L+ANH I QIV++ E
Sbjct: 303 RKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTE 362
Query: 430 HEKENKLNVLLQEIGQSQE 486
EK +++ ++++ +++E
Sbjct: 363 MEKRDRMIKHMEKVMENKE 381
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV TKR A+ I+R +R+ GWPA+ +HGDK Q ERD VL
Sbjct: 387 FVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVL 424
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 126 bits (304), Expect = 4e-28
Identities = 61/88 (69%), Positives = 71/88 (80%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQQ A FG +S ++NTC++GG PK Q RDL++GVEIVIATPGRLID LE TNL
Sbjct: 182 AVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNL 241
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+R T +VLDEADRMLDMGFEPQIRK +S
Sbjct: 242 RRVT-IVLDEADRMLDMGFEPQIRKCIS 268
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 516 TKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
T + + ++R +R GWPA+ +HGDK+Q ERD VL
Sbjct: 323 TLKGCDQVTRQLRMDGWPALSIHGDKSQAERDWVL 357
Score = 37.5 bits (83), Expect = 0.26
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1
Query: 274 PDRQTLMWSATWPKEVKKLA 333
PDRQTL WSATWPK V ++
Sbjct: 271 PDRQTLYWSATWPKNVNHVS 290
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 118 bits (284), Expect = 1e-25
Identities = 60/111 (54%), Positives = 73/111 (65%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
+QI++ A FG +RNT ++GG PKR Q + GVEI IA PGRLID LE+G TNL
Sbjct: 75 EQIREQANQFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLS 134
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
R TYLVLDEADRMLDMGFEPQIRK +S+ + PK+ + L R
Sbjct: 135 RVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLAR 185
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQ-LSANHNILQIVDIC 423
+K++ QIRPDRQTL+WSATWPKEV+KLA D + I IN+GS+ L A+HNI Q V++
Sbjct: 157 RKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVV 216
Query: 424 QEHEKENKLNVLLQEIGQSQEP 489
+E EK+ +L + L ++ P
Sbjct: 217 EESEKKARLKMFLGQVMVESAP 238
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F ETKR A+ +++ +R GWPA+C+HGDK Q+ER VL
Sbjct: 243 FCETKRGADILTKELRLDGWPALCIHGDKKQEERTWVL 280
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 117 bits (281), Expect = 3e-25
Identities = 56/85 (65%), Positives = 66/85 (77%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+QI++ A FG +S ++ + +GG PKR Q L RGVEI+IA PGRLIDFLE TNL
Sbjct: 296 AEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNL 355
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+R TYLVLDEADRMLDMGFEPQIRK
Sbjct: 356 RRVTYLVLDEADRMLDMGFEPQIRK 380
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQ 426
+KI+ QIRPDRQTLM+SATWPKEV L+ L + + +NIGSL L+ HNI Q V I +
Sbjct: 379 RKIVGQIRPDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIEQNVFILE 438
Query: 427 EHEKENKLNVLLQEI 471
E EK KL LL+++
Sbjct: 439 EREKRVKLKELLKKL 453
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F ETK+ A+ ++R +R GWPA+C+HGDK Q+ER VL
Sbjct: 462 FSETKKGADTLTRELRLDGWPALCIHGDKKQEERTWVL 499
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 114 bits (275), Expect = 1e-24
Identities = 57/95 (60%), Positives = 68/95 (71%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ A FG +S + + C++GGAPK Q RDLERG +IV+ATPGRL D LE +L
Sbjct: 316 ATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSL 375
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
+ +YLVLDEADRMLDMGFEPQIRK + K Q R
Sbjct: 376 HQVSYLVLDEADRMLDMGFEPQIRK-IVKQVQPKR 409
Score = 88.2 bits (209), Expect = 1e-16
Identities = 44/87 (50%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQ 426
+KI++Q++P RQTLM++ATWPKEV+K+A D L + +Q+NIG+ QL AN +I Q VD+
Sbjct: 399 RKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVIT 458
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTII 507
EK +L+ +L +SQEPG+K II
Sbjct: 459 PPEKSRRLDQIL----RSQEPGSKIII 481
Score = 39.9 bits (89), Expect = 0.049
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +3
Query: 507 FVETKRKAENISRNI-RRYGWPAVCMHGDKTQQERDEVL 620
F TKR + ++RN+ R+YG A+ HGDK+Q ERD VL
Sbjct: 482 FCSTKRMCDQLARNLARQYGASAI--HGDKSQAERDSVL 518
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 114 bits (275), Expect = 1e-24
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A FG +S + +TC++GGAPK Q RDL+RGV++V+ATPGRL D LE +L
Sbjct: 235 ATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISL 294
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
++ +YLVLDEADRMLDMGFEPQIRK
Sbjct: 295 KQVSYLVLDEADRMLDMGFEPQIRK 319
Score = 73.3 bits (172), Expect = 4e-12
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQ 426
+KI+++I P RQTLM++ATWPKEV+++AED L +Q+ IGS+ +L AN I Q V++
Sbjct: 318 RKIVKEIPPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELIT 377
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTII 507
EK + L++I +SQ+ G+K +I
Sbjct: 378 PSEKLRR----LEQILRSQDSGSKVLI 400
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR + ++R + R + A +HGDK+Q ER++VL
Sbjct: 401 FCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVL 437
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 111 bits (268), Expect = 1e-23
Identities = 53/85 (62%), Positives = 62/85 (72%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ FG + + CV+GGAPK Q ++L G +IVIATPGRLIDFLE +L
Sbjct: 299 ANQIQEQCFKFGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDL 358
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+R TYLVLDEADRMLDMGFEP IRK
Sbjct: 359 KRVTYLVLDEADRMLDMGFEPSIRK 383
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/93 (41%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQ 426
+KI+ QIRPDRQTLM+SATWP+ V++LA D+ GD I I IG ++ + N++I Q V+I
Sbjct: 382 RKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIID 441
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTIILLKPRE 525
+ +K +++ +L + +S KTII + ++
Sbjct: 442 KSQKYDRVKEILSTMTRSD----KTIIFTQTKK 470
Score = 38.3 bits (85), Expect = 0.15
Identities = 13/38 (34%), Positives = 28/38 (73%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TK+ +++S+ ++ +C+HGDK+Q++RD+V+
Sbjct: 465 FTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDKVM 502
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 111 bits (268), Expect = 1e-23
Identities = 58/110 (52%), Positives = 74/110 (67%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI++ + FG +S ++ C++GGA K Q L++GV++VIATPGRLIDFLE TT L
Sbjct: 187 AMQIERESERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTL 246
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
+R TYLVLDEADRMLDMGFE QIRK L + + PK +NL
Sbjct: 247 RRVTYLVLDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNL 296
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQ 426
+KI+ QIRPDRQTLM+SATWPK V+ LA+DY + + + IG +L+ N I QIV +
Sbjct: 270 RKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTD 329
Query: 427 EHEKENKL 450
+ +K N+L
Sbjct: 330 QSKKINQL 337
Score = 39.9 bits (89), Expect = 0.049
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TK+ E++SR + + G+ + +HGDK Q++RD V+
Sbjct: 353 FAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVM 390
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 109 bits (263), Expect = 4e-23
Identities = 53/85 (62%), Positives = 62/85 (72%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+QI+Q F S +RNTC +GG PK Q L++GV I+IA PGRLID LE+ TNL
Sbjct: 199 AEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNL 258
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
R TYLVLDEAD+MLDMGFE QIRK
Sbjct: 259 MRVTYLVLDEADKMLDMGFELQIRK 283
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/61 (55%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQ 426
+KI++QIRPDRQTLMWSATWPKEV+ LA+D + IQ+N+GSL L+A +I Q + + +
Sbjct: 282 RKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLE 341
Query: 427 E 429
+
Sbjct: 342 D 342
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 109 bits (262), Expect = 5e-23
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ A FG +S + C++GGAPK Q +++ERGV+IV+ATPGRL D LE +L
Sbjct: 246 ATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISL 305
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ +YLVLDEADRMLDMGFEPQIRK +++
Sbjct: 306 HQVSYLVLDEADRMLDMGFEPQIRKIVNE 334
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/87 (44%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQ 426
+KI+ ++ RQTLM++ATWPKEV+K+A D L + Q+NIG++ +L AN +I Q +++
Sbjct: 329 RKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLA 388
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTII 507
EK ++ L++I +SQEPG+K II
Sbjct: 389 PMEKHSR----LEQILRSQEPGSKIII 411
Score = 39.5 bits (88), Expect = 0.065
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR + ++RN+ R + A +HGDK+Q ERD+VL
Sbjct: 412 FCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVL 448
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 108 bits (260), Expect = 9e-23
Identities = 52/89 (58%), Positives = 66/89 (74%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ A FG +S + TC++GGAPK Q ++LERG +IV+ATPGRL D LE +
Sbjct: 520 ATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDF 579
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
Q+ + LVLDEADRMLDMGFEPQIRK +++
Sbjct: 580 QQVSLLVLDEADRMLDMGFEPQIRKIVNE 608
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQ 426
+KI+ +I P RQTLM++ATWPKEV+K+A D L + +Q+NIG + +L+AN I Q V++
Sbjct: 603 RKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVP 662
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTII 507
+ EKE + L++I +SQE G+K II
Sbjct: 663 QMEKERR----LEQILRSQERGSKVII 685
Score = 39.5 bits (88), Expect = 0.065
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR ++++R++ R+ + AV +HGDKTQ ERD VL
Sbjct: 686 FCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVL 722
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 105 bits (252), Expect = 9e-22
Identities = 52/95 (54%), Positives = 64/95 (67%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ + F + + C++GGA KR Q L R +IV+ATPGRLIDFL+ TNL
Sbjct: 154 AMQIQEHISYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNL 213
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
TYLVLDEADRMLDMGFE Q+RK + Y + DR
Sbjct: 214 HNVTYLVLDEADRMLDMGFEQQVRK-IDSYIREDR 247
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQ 426
+KI IR DRQT+ +SATWPK V+ LA D + I + IGS +++ N NI Q
Sbjct: 237 RKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTINKNITQETICLY 296
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTIILLKPR---EKLRTYQGT*GDMAGQLFACMAIKL 597
++EK+ +L +L+E+ K +I ++ + E L +Y G F CM++
Sbjct: 297 QNEKQEELLYILEELSNKD----KVLIFVETKKDCEDLASYLSEHG------FFCMSLHG 346
Query: 598 NKKEMKFSY 624
+K + + Y
Sbjct: 347 DKTQQQRDY 355
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ E+++ + +G+ + +HGDKTQQ+RD V+
Sbjct: 320 FVETKKDCEDLASYLSEHGFFCMSLHGDKTQQQRDYVM 357
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 105 bits (252), Expect = 9e-22
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F + S VR V+GGA +Q RDLERG +++ATPGRL+D +E+G L
Sbjct: 279 AVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGL 338
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
C YLVLDEADRMLDMGFEPQIR+
Sbjct: 339 DFCKYLVLDEADRMLDMGFEPQIRR 363
Score = 49.6 bits (113), Expect = 6e-05
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
R T+M+SAT+PKE++ LA D+L +YI + +G + S + NI Q V +E +K + L L
Sbjct: 376 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSFLLDL 434
Query: 460 LQEIGQ 477
L G+
Sbjct: 435 LNATGK 440
Score = 36.7 bits (81), Expect = 0.46
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A+++ + G+ +HGD++Q++R+E L
Sbjct: 447 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEAL 484
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 104 bits (249), Expect = 2e-21
Identities = 54/96 (56%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI +VA F +R TC+FGGA + QA DL +V+ATPGRLIDF+E G +
Sbjct: 211 AQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPM 270
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK---SLSKYAQT 280
R +LVLDEAD+MLDMGFEPQIRK +SK QT
Sbjct: 271 NRVNFLVLDEADQMLDMGFEPQIRKIIGHISKDRQT 306
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/73 (47%), Positives = 51/73 (69%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KII I DRQT+M+SATWPKE+++LA D+L D + + IG+ L+ N NI Q++ C+E
Sbjct: 294 RKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEE 353
Query: 430 HEKENKLNVLLQE 468
EK +K +L E
Sbjct: 354 FEKLSKCLEVLNE 366
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TKR +++ N+ G+ A +HGDK Q +RD VL
Sbjct: 375 FTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVL 412
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 101 bits (243), Expect = 1e-20
Identities = 51/79 (64%), Positives = 56/79 (70%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+ TCV+GG PK Q R L GV + IATPGRLID LE TNL R TYL LDEADRMLD
Sbjct: 248 IMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLD 307
Query: 230 MGFEPQIRKSLSKYAQTDR 286
MGFE QIRK S+ +TDR
Sbjct: 308 MGFEDQIRKICSQ-IRTDR 325
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/75 (44%), Positives = 55/75 (73%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI QIR DRQTLM+SATWP+E++ LA + D+++++IGS +L AN ++ Q V + +
Sbjct: 315 RKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEG 374
Query: 430 HEKENKLNVLLQEIG 474
+ KE K+ +L+++G
Sbjct: 375 YHKEEKMEEILRQVG 389
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 101 bits (242), Expect = 1e-20
Identities = 51/94 (54%), Positives = 62/94 (65%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQI A FG + VFGG K EQ++ L+ G EIV+ATPGRLID ++ TNL
Sbjct: 193 QQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLH 252
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
R TYLV DEADRM DMGFEPQ+R S++ + DR
Sbjct: 253 RVTYLVFDEADRMFDMGFEPQVR-SIANNVRPDR 285
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I +RPDRQTL++SAT+ K+V+ L D L D +++ IG L AN ++ QIV I
Sbjct: 275 RSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EANEDVTQIVHIF-- 331
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLK 516
+ +K L Q + G+ I + K
Sbjct: 332 NSMPSKWEWLTQNLVSFASAGSVLIFVTK 360
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV K +E ++ N+R+ + +HGD Q ER +VL
Sbjct: 357 FVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVL 394
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 101 bits (241), Expect = 2e-20
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F + + V+ +GG P +Q R+LERGV+I++ATPGRL D LE+G +L
Sbjct: 237 ACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSL 296
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
Q +L LDEADRMLDMGFEPQIRK
Sbjct: 297 QMVRFLALDEADRMLDMGFEPQIRK 321
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/78 (32%), Positives = 49/78 (62%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+++SAT+P+E+++LA D+L +YI + +G + S+ I+Q V+ + +K + L L
Sbjct: 334 RQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMDL 392
Query: 460 LQEIGQSQEPGAKTIILL 513
L ++ G + + L+
Sbjct: 393 LHAQRENGNQGKQALTLV 410
Score = 40.3 bits (90), Expect = 0.037
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
FVETK+ A+++ + G+PA +HGD++QQER+ L S
Sbjct: 411 FVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRS 450
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 100 bits (240), Expect = 2e-20
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI++V +F +R+T V+GGA + Q R L G E+VIATPGRLID ++G L R
Sbjct: 175 QIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSR 234
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLSK 268
T+LVLDEADRMLDMGFEPQ+RK + K
Sbjct: 235 VTFLVLDEADRMLDMGFEPQLRKIIPK 261
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KII + +RQTLMWSATWP+EV+ LAE Y+ +YIQ+ +G+ +L N I QIV++C
Sbjct: 256 RKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSG 315
Query: 430 HEKENKL 450
EKE+KL
Sbjct: 316 REKEDKL 322
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F KR +++ + R G+ A +HGDK+Q RD+VL
Sbjct: 337 FCNMKRTCDDLEYVLNRSGYGAAALHGDKSQNIRDKVL 374
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 100 bits (239), Expect = 3e-20
Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTT 175
AQQ +V D G S VR CV+GGAPK EQ ++ G +++ATPGRL DF+E+G
Sbjct: 112 AQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVI 171
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
L R T LVLDEADRMLD+GFEP+IR +++ + DR
Sbjct: 172 KLDRVTMLVLDEADRMLDLGFEPEIR-AIAGATRADR 207
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
R DRQT+M+SATWP+ V+ LA +++ + I++ IG+ L A+ +I QIV++ + +K+ L
Sbjct: 204 RADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQIVEVVEPQDKDRHL 263
Query: 451 -NVLLQEIGQSQEPGAKTIILLKPREKLRTYQ 543
V+ Q +G+ +E I L +E +Q
Sbjct: 264 ARVMKQYLGKGKEVPRTLIFGLYKKECANLHQ 295
Score = 35.9 bits (79), Expect = 0.80
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 519 KRKAENISRNIRRYGWPAVCMHGDKTQQERDE 614
K++ N+ + + R WPAVC+HGD +Q +R++
Sbjct: 287 KKECANLHQRLSRE-WPAVCIHGDMSQHDREK 317
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 100 bits (239), Expect = 3e-20
Identities = 46/93 (49%), Positives = 63/93 (67%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F ++ VR V+GG QAR+LE+G +V+ TPGRL+DF+ KG NL +
Sbjct: 364 QIYLEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSK 423
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
YL+LDEADRMLDMGFEP+IRK ++ + ++
Sbjct: 424 VKYLILDEADRMLDMGFEPEIRKLVTTFDMPEK 456
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQTLM+SAT+ E+++LA+++L +Y+ + +G + AN +I Q V ++EK KL +
Sbjct: 459 RQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVG-GANSDITQEVHQVTKYEKREKLVEI 517
Query: 460 LQEIG 474
L + G
Sbjct: 518 LNQAG 522
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLV 623
F+ETKR A+ ++ + + +PA +HGD+ Q+ER+E L+
Sbjct: 529 FLETKRSADFLAAYLSQEQYPATSIHGDRLQREREEALL 567
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 100 bits (239), Expect = 3e-20
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F + S+VR V+GGAP Q R+++RG ++++ATPGRL D LE+G +L
Sbjct: 250 ATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSL 309
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
YLVLDEADRMLDMGFEPQIR
Sbjct: 310 ANIKYLVLDEADRMLDMGFEPQIR 333
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 456
+RQTLM+SAT+P +++ LA D+L +YI +++G + S + NI Q + + +K++ L
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG-STSENITQRILYVDDMDKKSALLD 404
Query: 457 LL 462
LL
Sbjct: 405 LL 406
Score = 37.1 bits (82), Expect = 0.35
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR A+ ++ + + A +HGD+TQ ER+ L
Sbjct: 417 FVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERAL 454
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 99 bits (238), Expect = 4e-20
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +2
Query: 62 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 241
CV+GGAPK Q L RGV I++ATPGRLIDFL+ NL R TYLVLDEADRMLDMGFE
Sbjct: 207 CVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
Query: 242 PQIRK 256
PQ+RK
Sbjct: 267 PQVRK 271
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/73 (46%), Positives = 55/73 (75%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI QIRPDRQT+M+SATWP+E+++LA ++ +I+I++GS +L AN ++ Q + QE
Sbjct: 270 RKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQE 329
Query: 430 HEKENKLNVLLQE 468
K+++L L+QE
Sbjct: 330 FAKQDELRKLMQE 342
Score = 43.2 bits (97), Expect = 0.005
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F + KR A+ + R +RR+G+ A+ +HGDK Q++R+ +L
Sbjct: 351 FCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFIL 388
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 99.5 bits (237), Expect = 6e-20
Identities = 45/83 (54%), Positives = 61/83 (73%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI + A F + + ++ +GGAP +Q R+LERGV+I++ATPGRL+D +E+ +L+
Sbjct: 211 QIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRM 270
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
YL LDEADRMLDMGFEPQIRK
Sbjct: 271 IKYLALDEADRMLDMGFEPQIRK 293
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
FVETKR + + + + G A +HGDK Q ER+ + S
Sbjct: 538 FVETKRGVDALEQWLCMNGLAATAIHGDKVQMERERAMKS 577
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 99.5 bits (237), Expect = 6e-20
Identities = 47/94 (50%), Positives = 61/94 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI++ FG ++ V GGA + +Q L GVE+VIATPGRL+D LE L
Sbjct: 391 AQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLL 450
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTD 283
+CTY++LDEADRMLDMGFEP ++K L T+
Sbjct: 451 NQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTN 484
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M++AT +++LA YL ++IGS + Q+V + E K KL +
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEV 567
Query: 460 LQEIGQSQEP 489
L+ Q Q P
Sbjct: 568 LE--SQFQPP 575
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 99.5 bits (237), Expect = 6e-20
Identities = 49/94 (52%), Positives = 63/94 (67%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQI FG +R+ V+GG EQA+ L+ G EIV+ TPGRLID ++K TNLQ
Sbjct: 340 QQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQ 399
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
R +YLV DEADRM DMGFE Q+R S++ + + DR
Sbjct: 400 RVSYLVFDEADRMFDMGFEYQVR-SIASHVRPDR 432
Score = 56.0 bits (129), Expect = 7e-07
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I +RPDRQTL++SAT+ K+++KLA D L D I++ G + AN ++ QIV+I
Sbjct: 422 RSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEIL-- 478
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLK 516
H +K N L + + + G+ + + K
Sbjct: 479 HSGPSKWNWLTRRLVEFTSSGSVLLFVTK 507
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 98.3 bits (234), Expect = 1e-19
Identities = 40/80 (50%), Positives = 61/80 (76%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+++ V+GG PK Q +L++G +I++ATPGRL+DFLE G NL +C Y+V+DEADR+LD
Sbjct: 230 IKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLD 289
Query: 230 MGFEPQIRKSLSKYAQTDRL 289
MGFE Q+RK +++ + +L
Sbjct: 290 MGFEKQLRKIMTQVNKNKQL 309
Score = 55.6 bits (128), Expect = 9e-07
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQ 426
+KI+ Q+ ++Q L +ATWP++V+KLA D+ D ++I IG +L+AN NI Q V I
Sbjct: 297 RKIMTQVNKNKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISS 356
Query: 427 EHEKENKLNVLLQE 468
+ + KL L+E
Sbjct: 357 SIDMKKKLLDWLKE 370
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 468 NWTKSRTWCENNN---FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
+W K ENN F +TKR +N+ + +R + + A+ +HGDK Q+ERD +L
Sbjct: 366 DWLKENY--ENNKILIFCDTKRNCDNLGKELRYHQYNALSIHGDKQQRERDRIL 417
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/88 (53%), Positives = 63/88 (71%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + F + ++ TCVFGGAP EQ R+L RG++IVIATPGRLID L++ L
Sbjct: 204 AIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITL 263
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+L+LDEADRMLDMGFEPQ+++ ++
Sbjct: 264 SEVRFLILDEADRMLDMGFEPQMQEVIN 291
Score = 40.3 bits (90), Expect = 0.037
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKLN 453
DRQT+++SAT+P V+ LA D++ Y +I++G A +I Q C E +K ++L
Sbjct: 300 DRQTMLFSATFPDAVRNLARDFMRPKYCRISVG--MQDAPKSIEQRFIYCSEMDKFSELL 357
Query: 454 VLLQEI 471
+++E+
Sbjct: 358 GVIKEV 363
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI + A + +R ++GGA K Q R+L+ G EI++ATPGRL++FL GT L R
Sbjct: 406 QIAEEARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNR 465
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
+Y V+DEADRMLDMGFEPQIRK
Sbjct: 466 VSYFVMDEADRMLDMGFEPQIRK 488
Score = 74.1 bits (174), Expect = 2e-12
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 154 FLGKGHNQLTAVHIFSS**G*SYVGYGI*TTNQKIIEQIRPDRQTLMWSATWPKEVKKLA 333
FL G +L V F + G +KI+ QIRPDRQTLM+SATWP E+K+LA
Sbjct: 455 FLSNGTIKLNRVSYFVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLA 514
Query: 334 EDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
++ + I I +G L+L+AN NI Q V+ +E +KL
Sbjct: 515 SEFCKANSIYIQVGDLELTANPNIRQNVEFPNSYEVRDKL 554
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 97.9 bits (233), Expect = 2e-19
Identities = 48/87 (55%), Positives = 57/87 (65%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI++ FG +R V GG + +Q L G EIVIATPGRLID LE L
Sbjct: 481 AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL 540
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
RCTY+VLDEADRM+DMGFEP ++K L
Sbjct: 541 SRCTYVVLDEADRMIDMGFEPDVQKIL 567
Score = 39.1 bits (87), Expect = 0.086
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M++AT P V++LA YL + IGS + + Q V + E EK KL +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAI 658
Query: 460 LQE 468
L++
Sbjct: 659 LEQ 661
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 97.5 bits (232), Expect = 2e-19
Identities = 43/95 (45%), Positives = 67/95 (70%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
Q + ++ A F ++R+ V+GG PK Q +L++G +IV+ATPGRL+D LE G +L
Sbjct: 416 QVVDEIKA-FEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLL 474
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
RC Y+V+DEADR+LDMGFE Q++K +++ + +L
Sbjct: 475 RCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQL 509
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQ 426
+KI+ Q+ ++Q L ++ATWP++V+KLA + D ++I IG +L+AN NI Q V I
Sbjct: 497 KKIMTQVNRNKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGKSELTANKNIQQSVVISS 556
Query: 427 EHEKENKL 450
+ + KL
Sbjct: 557 SIDLKKKL 564
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TKR +++ + +R + + A+ +HGDK Q+ERD +L
Sbjct: 580 FCDTKRNCDSLCKELRYHQYNALAIHGDKEQRERDRIL 617
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 97.1 bits (231), Expect = 3e-19
Identities = 44/89 (49%), Positives = 62/89 (69%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + F + +R+ V+GGA Q R+++ G +++ATPGRL+DF+EK +L
Sbjct: 274 AIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISL 333
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ C Y+VLDEADRMLDMGFEPQIRK + +
Sbjct: 334 EFCKYIVLDEADRMLDMGFEPQIRKIIEE 362
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
+RQTLM+SAT+PKE++KLA D+L +YI + +G + S + +I Q + + EK N L
Sbjct: 370 NRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVG-STSDSIKQEIIYMTDVEKLNYL 426
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A++++R + G+P +HGD++Q ER+ L
Sbjct: 442 FVETKKGADSLARFLLSKGYPVSSIHGDRSQVEREAAL 479
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F +R C +GGAP ++Q DL+RG EIV+ TPGR+ID L
Sbjct: 504 AVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRV 563
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
TNL RCTYLVLDEADRM D+GFEPQ+ + ++
Sbjct: 564 TNLHRCTYLVLDEADRMFDLGFEPQVMRIIN 594
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/91 (34%), Positives = 56/91 (61%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+II IRPDRQT+++SAT+P+ ++ LA L ++I +G + A+ + QIV++ E
Sbjct: 591 RIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVAS-EVEQIVEVRPEE 649
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPRE 525
K ++L LL E+ +Q +T++ + +E
Sbjct: 650 SKFSRLLELLGELYNNQ-LDVRTLVFVDRQE 679
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 95.5 bits (227), Expect = 9e-19
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F + ++ FGG P+ Q +D + G +I +ATPGRLIDF+++G T+L R
Sbjct: 241 QIADEAIKFTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSR 300
Query: 188 CTYLVLDEADRMLDMGFEPQIR 253
CT+L+LDEADRML+MGFE Q++
Sbjct: 301 CTFLILDEADRMLEMGFEVQVQ 322
Score = 88.6 bits (210), Expect = 1e-16
Identities = 35/79 (44%), Positives = 60/79 (75%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q II QIRPDRQT+MW+ATWP+ +++ A ++ +QINIG+ L AN ++ QI+++CQE
Sbjct: 322 QDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQIIEVCQE 381
Query: 430 HEKENKLNVLLQEIGQSQE 486
++++K+N +++ IG ++
Sbjct: 382 RDRDSKMNEIVKRIGSEKK 400
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+TKR A+N+ +R + CMHGDK Q ERD L
Sbjct: 404 FVKTKRSADNLCYKLRDQRYRVACMHGDKVQAERDRAL 441
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGT 172
A QI + F +R C +GGAP REQ +L+RG EI++ TPGR+ID L +
Sbjct: 683 AVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRV 742
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
TNL+R TY+VLDEADRM DMGFEPQ+ K
Sbjct: 743 TNLKRVTYVVLDEADRMFDMGFEPQVMK 770
Score = 55.6 bits (128), Expect = 9e-07
Identities = 31/92 (33%), Positives = 56/92 (60%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KI +RPDRQT+++SAT P+ + L + L + I++ +G + A I QIV++ E
Sbjct: 770 KIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAK-EIEQIVEVRDEP 828
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREK 528
K +++ LL E+ ++ A+T+I ++ +EK
Sbjct: 829 SKFHRVLELLGEL-YDRDEDARTLIFVERQEK 859
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE + KA+++ + + G+P + +HG K Q +RD +
Sbjct: 853 FVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTI 890
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A QI + A F + S ++ ++GG R+Q L G I+IATPGRLID +E+G
Sbjct: 235 AIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIG 294
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRK 256
L C YLVLDEADRMLDMGFEPQIRK
Sbjct: 295 LAGCRYLVLDEADRMLDMGFEPQIRK 320
Score = 43.2 bits (97), Expect = 0.005
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 250 QKIIEQIRPD---RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQIVD 417
+KI+ Q P R T M+SAT+PKE++ LA+D+L D YI + +G + S + NI Q +
Sbjct: 319 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLL 377
Query: 418 ICQEHEK-ENKLNVLLQE 468
E EK N + +L+ E
Sbjct: 378 WVNEMEKRSNLMEILMNE 395
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
AQQI++ F + ++N V GG +Q +L GVEI +ATPGR ID L++G T+
Sbjct: 204 AQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTS 263
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRK 256
L R +Y+VLDEADRMLDMGFEPQIR+
Sbjct: 264 LSRISYVVLDEADRMLDMGFEPQIRE 289
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/82 (29%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQ 426
++I+ + QTL++SAT P E++ LA++YL + +Q+ +G + S N+ Q +V +
Sbjct: 288 REIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVS-SPTTNVSQTLVKVSG 346
Query: 427 EHEKENKLNVLLQEIGQSQEPG 492
+ + L++L++E Q+++ G
Sbjct: 347 SEKIDRLLDLLVEEASQAEKCG 368
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 93.5 bits (222), Expect = 4e-18
Identities = 50/110 (45%), Positives = 62/110 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q +VAA F ++ C++GG + Q L EIV ATPGRLIDFL+ G N
Sbjct: 171 ALQTDEVAAQFCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNP 230
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
R +LVLDEADRMLDMGFEPQIR ++ + PK+ R L
Sbjct: 231 NRANFLVLDEADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQL 280
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/120 (36%), Positives = 69/120 (57%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
II + DR+T M+SATWPKE+++LA D+L + I +++G +L+ N I Q V + QEHE
Sbjct: 256 IIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHE 315
Query: 436 KENKLNVLLQEIGQSQEPGAKTIILLKPREKLRTYQGT*GDMAGQLFACMAIKLNKKEMK 615
K K +L+E QS+ K II K + RT Q + + C++I +K + +
Sbjct: 316 KGEKCVEILKE-NQSK----KIIIFAKTK---RTVQQLSDFLKSKSIRCLSIHGDKTQQE 367
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 608
F +TKR + +S ++ + +HGDKTQQER
Sbjct: 335 FAKTKRTVQQLSDFLKSKSIRCLSIHGDKTQQER 368
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 92.7 bits (220), Expect = 7e-18
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI++ A + ++ C++GG +R Q + GVEI+IATPGRL D +++G ++
Sbjct: 193 ALQIEKEVAKYQFRG-IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDV 251
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
TYL+LDEADRMLDMGFEPQIRK L
Sbjct: 252 STITYLILDEADRMLDMGFEPQIRKVL 278
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/86 (40%), Positives = 57/86 (66%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+K++ +RPDRQT+M SATWP V++LA+ Y+ D IQ+ IG+L L+A H + Q++++ E
Sbjct: 275 RKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDE 334
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTII 507
+K ++N E + +P K II
Sbjct: 335 EDKFQRIN----EFVRDMQPTDKVII 356
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 92.7 bits (220), Expect = 7e-18
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F + S +R ++GG EQ R+L+RG +++ATPGRL D + +G L
Sbjct: 363 ATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGL 422
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
+ +LVLDEADRMLDMGFEPQIR
Sbjct: 423 ENLRFLVLDEADRMLDMGFEPQIR 446
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQTLM+SAT+PK +++LA D+L +YI + +G + S + NI Q + E+EK + L L
Sbjct: 460 RQTLMFSATFPKNIQELASDFLSNYIFLAVGRVG-STSENITQTILWVNENEKRSYLLDL 518
Query: 460 LQEIGQSQ---EPGAKTIILLKPRE 525
L + + P + T+I ++ ++
Sbjct: 519 LSRLREGSPDYSPDSLTLIFVETKK 543
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A+ + + + P +HGD++Q+ER++ L
Sbjct: 538 FVETKKGADALEEFLYQNKHPVTSIHGDRSQREREDAL 575
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 92.7 bits (220), Expect = 7e-18
Identities = 45/83 (54%), Positives = 55/83 (66%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI++ F H R T + GG EQ + +G EIVIATPGRLID LE+ L
Sbjct: 402 AQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVL 461
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+C Y+VLDEADRM+DMGFEPQ+
Sbjct: 462 NQCNYVVLDEADRMIDMGFEPQV 484
Score = 36.3 bits (80), Expect = 0.61
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 611
FV TK+ ++I++N+ + G+ +HG K+Q++R+
Sbjct: 582 FVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQRE 616
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 92.7 bits (220), Expect = 7e-18
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F + S +R ++GG EQ R+L+RG +++ATPGRL D + +G L
Sbjct: 391 ATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGL 450
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ +LVLDEADRMLDMGFEPQIR+
Sbjct: 451 ENIRFLVLDEADRMLDMGFEPQIRR 475
Score = 52.8 bits (121), Expect = 7e-06
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +1
Query: 250 QKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD 417
++I+EQ+ RQTLM+SAT+PK++++LA D+L +YI + +G + S + NI Q +
Sbjct: 474 RRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSENITQTIL 532
Query: 418 ICQEHEKENKLNVLLQEIGQSQEPGAKTIILL 513
E +K + L LL I E ++ L+
Sbjct: 533 WVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLI 564
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A+++ + + P +HGD+TQ+ER+E L
Sbjct: 565 FVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEAL 602
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 92.3 bits (219), Expect = 9e-18
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F +R CV+GGAP EQ ++++ +IV+ATPGRLID L +
Sbjct: 562 AVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRV 621
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
TNL R TYLVLDEADRM DMGFEPQ+ K L+
Sbjct: 622 TNLYRVTYLVLDEADRMFDMGFEPQVMKILN 652
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/92 (36%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQE 429
KI+ IRPDRQT+++SAT+PK+++ LA L + ++I +G + A I QIV++ E
Sbjct: 649 KILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVA-AEIEQIVEVRSE 707
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPRE 525
K ++L +L E+ ++E A+T+I + +E
Sbjct: 708 DTKFHRLLEILGEL-YNREKDARTLIFVDRQE 738
Score = 32.7 bits (71), Expect = 7.5
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+ + A+++ +++ R G+ + +HG K Q +RDE +
Sbjct: 733 FVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETI 770
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 91.9 bits (218), Expect = 1e-17
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F +R C +GGA ++Q DL+RG EI++ TPGR+I+ L +
Sbjct: 640 ATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRV 699
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
TNLQR TY+VLDEADRM DMGFEPQ+ K
Sbjct: 700 TNLQRVTYVVLDEADRMFDMGFEPQVMK 727
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/120 (32%), Positives = 68/120 (56%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
K+ IRP+RQT+++SAT P+ + LA+ L ++I +G + A I QIV++ +E
Sbjct: 727 KVFNNIRPNRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVA-PEITQIVEVREEK 785
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREKLRTYQGT*GDMAGQLFACMAIKLNKKEM 612
EK ++L LL E+ + E A+T+I + +EK D+ + + CM+I K ++
Sbjct: 786 EKFHRLLELLGELYNTDE-DARTLIFVDRQEKA---DDLLKDLMRKGYPCMSIHGGKDQV 841
Score = 37.1 bits (82), Expect = 0.35
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+ + KA+++ +++ R G+P + +HG K Q +RD +
Sbjct: 810 FVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTI 847
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+R+ CV+GG + EQ +L++GV+I+IATPGRL D NL+ TYLVLDEAD+MLD
Sbjct: 344 LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD 403
Query: 230 MGFEPQIRKSL 262
MGFEPQI K L
Sbjct: 404 MGFEPQIMKIL 414
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KI+ +RPDRQT+M SATWP V +LA+ YL + + + +G+L L A ++ Q + + E
Sbjct: 412 KILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEE 471
Query: 433 EKENKLNVLLQEIGQSQE 486
EK + + LQ + + +
Sbjct: 472 EKWSHMQTFLQSMSSTDK 489
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQI + A F + +R+ CV+GG+ Q +++ +G +I++ATPGRL+ F EK +L
Sbjct: 226 QQIYEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLS 285
Query: 185 RCTYLVLDEADRMLDMGFEPQIRK 256
YL+ DEADRMLDMGFEPQIR+
Sbjct: 286 SVRYLIFDEADRMLDMGFEPQIRE 309
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQTLM+SAT+PK++++LA D+L DY+ I +G A + I I E+E K +
Sbjct: 322 RQTLMFSATFPKQIQRLAADFLDDYVFITVG----RAGSTVESIQQIILWVEEEIKQEAI 377
Query: 460 LQEIGQSQEPGAKTIILLKPR 522
L +G+ G KT+I ++ +
Sbjct: 378 LDVLGEFAGKGQKTVIFVETK 398
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERD 611
FVETKR A+ + + +G+ +HGD++Q +RD
Sbjct: 394 FVETKRGADILENYLYDHGYKVDSIHGDRSQADRD 428
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F +R + V+GG K EQ ++L+ G EIV+ATPGRLID L+ +
Sbjct: 314 AHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTM 373
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
R +YLVLDEADRM D+GFEPQ+R
Sbjct: 374 MRASYLVLDEADRMFDLGFEPQVR 397
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I+ QIRPDRQTL++SAT P +V+KLA + L D I++ +G + + AN +I Q+V++
Sbjct: 397 RSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQVVNVIPS 455
Query: 430 HEKENKLNVLLQEI 471
+ KL LL+++
Sbjct: 456 DAE--KLPWLLEKL 467
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTN 178
A Q+ Q A F + C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN
Sbjct: 351 AIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATN 410
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
R T+LV DEADRM DMGFE Q+ KS+S + + DR
Sbjct: 411 FLRTTFLVFDEADRMFDMGFEAQV-KSISDHVRPDR 445
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/89 (34%), Positives = 53/89 (59%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I + +RPDRQ LM+SAT+ ++V++LA D L D ++I G + AN +I Q V + Q
Sbjct: 435 KSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQKVFVMQ- 492
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLK 516
++ KL+ L++ + + G I + K
Sbjct: 493 -NQDVKLHWLIRNLVEFASLGKVLIFVTK 520
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 90.2 bits (214), Expect = 4e-17
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F + S VR V+GG R Q +D+ +G +++ATPGRL D LE+ L
Sbjct: 304 AVQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGL 363
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
YLVLDEADRMLDMGFEPQIRK
Sbjct: 364 DCIRYLVLDEADRMLDMGFEPQIRK 388
Score = 55.6 bits (128), Expect = 9e-07
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +1
Query: 250 QKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD 417
+KI+EQ RQTLM+SAT+P+E++ LA D+L DY+ + +G + S + NI Q +
Sbjct: 387 RKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVG-STSQNITQRIV 445
Query: 418 ICQEHEKENKLNVLLQEI 471
E+EK + L +L +I
Sbjct: 446 YVDENEKRDHLLDILTDI 463
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 89.8 bits (213), Expect = 5e-17
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
++ CV+GG + Q DLERG EI+I TPGRL D + ++ TYLVLDEADRMLD
Sbjct: 385 MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLD 444
Query: 230 MGFEPQIRK 256
MGFEPQIRK
Sbjct: 445 MGFEPQIRK 453
Score = 69.7 bits (163), Expect = 5e-11
Identities = 30/80 (37%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+K++ IRPDRQT+M SATWP V++LA+ Y+ + IQ+ +GSL L+A H++ QI+ + ++
Sbjct: 452 RKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMED 511
Query: 430 H-EKENKLNVLLQEIGQSQE 486
+K N + ++ + + +
Sbjct: 512 DMDKFNTITSFVKNMSSTDK 531
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 89.8 bits (213), Expect = 5e-17
Identities = 36/69 (52%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 62 CVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 238
C++GG P K++Q +++G+ +++ATPGRLI+ +++G NL + T L+LDEADRMLDMGF
Sbjct: 181 CIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGF 240
Query: 239 EPQIRKSLS 265
EPQ+R +S
Sbjct: 241 EPQVRDIVS 249
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 372
I+ IR DRQT++ SATWP EV++L++++ D I + IG
Sbjct: 247 IVSTIREDRQTILLSATWPNEVQQLSKEFCYDPILVKIG 285
Score = 43.2 bits (97), Expect = 0.005
Identities = 14/38 (36%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F ETK++ E++S+++ + G+ + +HGDK+Q +RD ++
Sbjct: 322 FAETKKRCEDLSQSLTKQGYFCISLHGDKSQDQRDAIM 359
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 89.4 bits (212), Expect = 6e-17
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ QIRPDRQTL WSATWPKEV++LA ++L D ++ IGS +L ANH I Q V+I E
Sbjct: 236 KKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSE 295
Query: 430 HEKENKLNVLLQEI 471
+K NKL LL++I
Sbjct: 296 SQKYNKLVNLLEDI 309
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
Frame = +2
Query: 77 APKREQARDLER-----GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 241
AP RE A +++ GVEIVIATPGRLID +E TNL+R TYLVLDEADRMLDMGFE
Sbjct: 173 APTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFE 232
Query: 242 PQIRKSLSK 268
PQI+K +S+
Sbjct: 233 PQIKKIVSQ 241
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F++TK+ + I+R +R GWPA+ +HGDK+Q ERD VL
Sbjct: 318 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 355
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 89.4 bits (212), Expect = 6e-17
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F + VR +GG Q RDL+RG I+IATPGRL+DF+ +G L
Sbjct: 405 QIFLEARKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDH 464
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLS 265
+++LDEADRMLDMGFE +IRK S
Sbjct: 465 VEFVILDEADRMLDMGFETEIRKLAS 490
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/85 (27%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+ DR TLM+SAT+P E+++LA D+L D++ + +G + + I+ + Q+ +K K
Sbjct: 497 KSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQD-DKRAK 555
Query: 448 LNVLLQEIGQSQEPGAKTIILLKPR 522
L L+ ++ +++ ++T++ ++ +
Sbjct: 556 LLELISDVAETR---SRTLVFVETK 577
Score = 40.3 bits (90), Expect = 0.037
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 474 TKSRTWCENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
T+SRT FVETKR A+ ++ + + G P +HGD+ QQER++ L
Sbjct: 566 TRSRTLV----FVETKRGADFLACMLSQEGCPTTSIHGDRLQQEREQAL 610
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 89.0 bits (211), Expect = 8e-17
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +2
Query: 32 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLD 208
FG S R +FGG KR+Q + L G EIV+ATPGRL+D L K +TNL+R TYL LD
Sbjct: 154 FG-VSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLALD 212
Query: 209 EADRMLDMGFEPQIRKSLSKYAQTDR 286
EADRMLDMGFE +I +S+ + + DR
Sbjct: 213 EADRMLDMGFE-KIVRSICQAVRPDR 237
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/88 (28%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQ 426
+ I + +RPDRQ +M+SAT P +++LA D L D + ++IG++ AN ++ Q+V + +
Sbjct: 227 RSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVG-GANEDVRQVVYVFE 285
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTIIL 510
+ + + L + +G + + G + +
Sbjct: 286 DDAR--RAAWLFENLGDAVDEGQAIVFV 311
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 88.6 bits (210), Expect = 1e-16
Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Frame = +2
Query: 17 QVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
QV A+ SY +++ C++GG + Q +DL +G +I+IATPGRL D L+
Sbjct: 330 QVDAECSEYSYRGLKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSI 389
Query: 191 TYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLRITWE-TTFRSI 367
TYLVLDEAD+MLDMGFEPQI K L + DR L K + + +++ FRS+
Sbjct: 390 TYLVLDEADKMLDMGFEPQIMKILLD-VRPDRQTVMTSLPVCKVEPVEQNSFDFRAFRSV 448
Query: 368 *DHY 379
DHY
Sbjct: 449 ADHY 452
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 88.6 bits (210), Expect = 1e-16
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI+ + + Y ++ C++GG + EQ GVEIVIATPGRL D G +L
Sbjct: 176 AQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISL 234
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
TY+VLDEADRMLDMGFE IR+ L + + DRL
Sbjct: 235 ASVTYVVLDEADRMLDMGFEVAIRRILFE-IRPDRL 269
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/91 (26%), Positives = 48/91 (52%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++I+ +IRPDR + SATWP+ V+KL + Y + + GSL L++ ++ Q +
Sbjct: 258 RRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPH 317
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPR 522
+ ++ ++ + + K II +K +
Sbjct: 318 DSRFLRVCEIVNFLTAAHGQNYKMIIFVKSK 348
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TN 178
QI + F + +R CV+GG EQ +L+RG EI++ TPGR+ID L + TN
Sbjct: 598 QIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTN 657
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRK 256
L+R TY+VLDEADRM DMGFEPQ+ +
Sbjct: 658 LRRVTYVVLDEADRMFDMGFEPQVMR 683
Score = 47.2 bits (107), Expect = 3e-04
Identities = 30/88 (34%), Positives = 51/88 (57%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+II+ +RPDRQT+M+SAT+P++++ LA L I++ +G + + Q V I +
Sbjct: 683 RIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCK-EVEQHVVILNDD 741
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLK 516
K K LL+ +G QE G+ + + K
Sbjct: 742 AKFFK---LLELLGIYQEAGSIIVFVDK 766
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A Q + A F ++ C +GG EQ DL+RG EIV+ TPGR+ID L +
Sbjct: 390 AMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKV 449
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
TNL+R TYLVLDEADRM D GFEPQI K
Sbjct: 450 TNLRRVTYLVLDEADRMFDKGFEPQIMK 477
Score = 56.0 bits (129), Expect = 7e-07
Identities = 32/92 (34%), Positives = 56/92 (60%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
K++ IRPD+QT+++SAT+P+ ++ LA L ++I +G + + +I Q IC EH
Sbjct: 477 KVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEH 535
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREK 528
+K K LL+ +G E G+ +I+ + +EK
Sbjct: 536 QKFLK---LLELLGMYYEEGS-SIVFVDKQEK 563
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = +2
Query: 32 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 211
F + S +R ++GG ++Q RDLERG +++ATPGRL D + +G L +LVLDE
Sbjct: 406 FCYRSRMRPAVLYGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDE 465
Query: 212 ADRMLDMGFEPQIRK 256
ADRMLDMGFEPQIR+
Sbjct: 466 ADRMLDMGFEPQIRR 480
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +1
Query: 250 QKIIEQIRP----DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD 417
++I+E+ R +RQTLM+SAT+PK +++LA D+L YI + +G + S + NI Q +
Sbjct: 479 RRIVEESRMPVTGERQTLMFSATFPKAIQELASDFLYRYIFLAVGRVG-STSVNITQTIF 537
Query: 418 ICQEHEKENKLNVLLQEIGQSQE 486
+E+ K + L LL I + +
Sbjct: 538 WVEENIKRSHLLDLLSNITKQND 560
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A+++ + + +P +HGD+TQ ER+E L
Sbjct: 571 FVETKKAADSLEEFLYNHNFPVTSIHGDRTQAEREEAL 608
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI F S + C++GG + Q L +G +I+IA PGRLID L++G T L++
Sbjct: 219 QIYDQFQKFSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQ 278
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
++LVLDEADRMLDMGFEPQIRK
Sbjct: 279 VSFLVLDEADRMLDMGFEPQIRK 301
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/69 (46%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQ 426
+KI++QIRP RQT+++SATWPKEV+KLA D+ + + I IG+++L++N I QIV + +
Sbjct: 300 RKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIKQIVYVMK 359
Query: 427 EHEKENKLN 453
+K + N
Sbjct: 360 AIDKNQRYN 368
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TK+ + + + + R G + +HGDK Q ERD V+
Sbjct: 400 FCSTKKGCDQLQKTLDREGIRCLALHGDKKQTERDYVM 437
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F + + C FGG+ Q +L++G +I++ TPGR+ID L +
Sbjct: 403 ALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRV 462
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
TNLQR TYLVLDEADRM DMGFEPQ+ K ++
Sbjct: 463 TNLQRVTYLVLDEADRMFDMGFEPQVTKVFTR 494
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/91 (29%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
K+ ++RPDRQT+++SAT+P++++ LA+ L + ++I +G + + A+ I Q V++ +
Sbjct: 490 KVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISVVAS-EITQKVELFENE 548
Query: 433 E----KENKLNVLLQEIGQSQEPGAKTIILL 513
+ +E K + LL + + A+ IL+
Sbjct: 549 DDKSLEEAKFSKLLSTLNDYGDKDAECKILI 579
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/89 (50%), Positives = 55/89 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + FGH VR + GG +QA L + EIVIATPGRL+D LE+G L
Sbjct: 84 ALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
LVLDEADRMLDMGF+PQ+ + L +
Sbjct: 144 DGIEALVLDEADRMLDMGFKPQLDRILRR 172
Score = 37.9 bits (84), Expect = 0.20
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I+ ++ RQTL++SAT EV A +L D +++ + +A Q+ + +H
Sbjct: 168 RILRRLPKQRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQVF-LADQH 226
Query: 433 EKENKLNVLLQEIGQS 480
EK L LL+ G S
Sbjct: 227 EKLPLLLTLLERDGDS 242
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGT 172
A QI F +R CV+GGA EQ +L+RG +IV+ TPGR+ID L +
Sbjct: 595 ALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRI 654
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQI 250
TNL+R T+LVLDEADRM DMGF PQI
Sbjct: 655 TNLRRVTFLVLDEADRMFDMGFGPQI 680
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I++ IRPDRQT+M+SAT+P +V+ +A+ L ++I G + + +I Q V++
Sbjct: 683 IVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSI-VSSDIEQFVEVRPTET 741
Query: 436 KENKLNVLL 462
+ +L LL
Sbjct: 742 RFRRLIELL 750
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q + + F + +R ++GG+ R Q DL+RG +I++ATPGRL D +++G NL
Sbjct: 297 AIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNL 356
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ +L+LDEADRMLDMGF PQIR+
Sbjct: 357 KLIKFLILDEADRMLDMGFAPQIRE 381
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M+SAT+P+E+++LA+D+L +YI + +G + ++ +I+Q V +E K L L
Sbjct: 395 RQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHKPRLLVKL 453
Query: 460 LQEIGQ 477
L E G+
Sbjct: 454 LLEQGE 459
Score = 41.1 bits (92), Expect = 0.021
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE KR+A+ I + +PAV +HGD++QQER+ L
Sbjct: 465 FVEMKRRADQIEDFLIDQNFPAVSIHGDRSQQEREHAL 502
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
++ C++GG +R Q ++ GVEI+IATPGRL D + ++ TYLVLDEADRMLD
Sbjct: 426 IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLD 485
Query: 230 MGFEPQIRKSL 262
MGFEPQIRK L
Sbjct: 486 MGFEPQIRKLL 496
Score = 72.5 bits (170), Expect = 8e-12
Identities = 29/79 (36%), Positives = 53/79 (67%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+K++ IRPDRQT+M SATWP V++LA+ Y+ + +Q+ +G+L L+A H + Q +++ E
Sbjct: 493 RKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQQIEVIDE 552
Query: 430 HEKENKLNVLLQEIGQSQE 486
+K ++ + +G S +
Sbjct: 553 EDKYMRVMNFVTNMGPSDK 571
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQ+ + + + + GG K Q ++L GV+I+IATPGRLI+ ++K TNLQ
Sbjct: 275 QQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQ 334
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSK 268
RCTY+VLDEAD+M +GFE QIR + +
Sbjct: 335 RCTYIVLDEADQMFSLGFEYQIRSIIGQ 362
Score = 50.0 bits (114), Expect = 5e-05
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ II QIRPD+Q L+++AT K++++L D L D I I IG + N +I Q+ I
Sbjct: 357 RSIIGQIRPDKQILLFTATMKKKIRQLCVDMLIDPIVITIGENENQVNEDIKQLPVIVD- 415
Query: 430 HEKENKLNVLLQEI 471
+ E +L LLQ +
Sbjct: 416 -DDEGRLRWLLQNL 428
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 87.4 bits (207), Expect = 2e-16
Identities = 43/94 (45%), Positives = 62/94 (65%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQ+ + + + + GG K EQ + L+ GVEI+IATPGRL++ ++K TNL+
Sbjct: 149 QQVYTESKRYAKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLR 208
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
RCTY+V+DEAD+M MGFE QIR S+ + + DR
Sbjct: 209 RCTYVVIDEADKMFSMGFEKQIR-SIMQQIRPDR 241
Score = 46.0 bits (104), Expect = 7e-04
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I++QIRPDRQTL+++AT K+++ L D L + + I IG + AN +I Q I ++
Sbjct: 231 RSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGG-ENQANEDIRQEPIIFKD 289
Query: 430 HEKE-----NKLNVLLQE 468
+ N LN+ LQ+
Sbjct: 290 SNFKDQWILNNLNLCLQK 307
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/82 (50%), Positives = 53/82 (64%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F + + VR V+GGA R Q +L RG ++++ATPGRL+D +G
Sbjct: 251 QIYGEARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSE 310
Query: 188 CTYLVLDEADRMLDMGFEPQIR 253
+L+LDEADRMLDMGFEPQIR
Sbjct: 311 IRFLILDEADRMLDMGFEPQIR 332
Score = 41.9 bits (94), Expect = 0.012
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQTL++SAT+P E+++LA +++ + + +G + S NI Q V ++ +K L L
Sbjct: 348 RQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVG-STTENITQDVRWIEDPDKRQALLTL 406
Query: 460 LQE 468
L+E
Sbjct: 407 LRE 409
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE KR A+ + R +R V +HGD+ Q+ER+E L
Sbjct: 418 FVEKKRDADYLERFLRNSELACVSIHGDRVQREREEAL 455
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +2
Query: 11 IQQVAADFGHTSY---VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
+QQ+ +F Y R V+GG + Q +L +G +IATPGRLIDFL++G +
Sbjct: 203 VQQILLEFNKMLYRCFPRAVGVYGGQNRSRQIHELSKGCHFMIATPGRLIDFLDEGMLRM 262
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
C +VLDEADRMLDMGFE QIRK LS
Sbjct: 263 DHCHSVVLDEADRMLDMGFEHQIRKILS 290
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 17 QVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
QV A+ SY +++ CV+GG ++EQ + + +GV+I+IATPGRL D NL+
Sbjct: 394 QVEAECSKYSYKGLKSVCVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSI 453
Query: 191 TYLVLDEADRMLDMGFEPQIRKSL 262
TYLVLDEAD+MLD+GFE QI K L
Sbjct: 454 TYLVLDEADKMLDLGFEGQITKIL 477
Score = 65.7 bits (153), Expect = 9e-10
Identities = 34/87 (39%), Positives = 52/87 (59%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KI+ +RPDRQT+M SATWP +++LA YL + + + +G+L L A H + Q + + E
Sbjct: 475 KILLDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEE 534
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILL 513
EK L+QE ++ P K II +
Sbjct: 535 EK----RTLIQEFLRNLAPEDKAIIFV 557
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI VA +++R+ V GG R Q D RG +IATPGRL D ++G +L+
Sbjct: 192 QITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKY 251
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLS 265
C LV+DEADRMLDMGFEPQIR+ ++
Sbjct: 252 CNKLVIDEADRMLDMGFEPQIREIIN 277
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---T 172
A QI++ F T ++ C +GG+ Q +L+RGV +++ATPGRLID L
Sbjct: 474 ALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRI 533
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
T L+R T++VLDEADRM DMGFEPQI+K
Sbjct: 534 TTLRRTTFVVLDEADRMFDMGFEPQIQK 561
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/55 (40%), Positives = 41/55 (74%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 414
QKI QIRPD+QT+++SAT+P+++++LA+ L + I+I +G + + A+ +I+
Sbjct: 560 QKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQEII 614
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +2
Query: 11 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
I V + G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L
Sbjct: 246 IADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDV 305
Query: 191 TYLVLDEADRMLDMGFEPQIRKSLSKYA 274
+++VLDEADRMLDMGFEP++R LS+ A
Sbjct: 306 SFVVLDEADRMLDMGFEPEVRAILSQTA 333
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/77 (37%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEH 432
I+ Q RQT+M+SATWP V +LA++++ + I++ IGS L+ANH+++QIV++ +
Sbjct: 328 ILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDR 387
Query: 433 EKENKLNVLLQEIGQSQ 483
++++L LL + ++Q
Sbjct: 388 SRDSRLVALLDKYHKAQ 404
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI V + G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L
Sbjct: 180 AQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRL 239
Query: 182 QRCTYLVLD 208
++++ D
Sbjct: 240 NDVSFVIAD 248
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + FG + T GGAP R+Q RDL +GV+I++ATPGRL D +++ L
Sbjct: 189 ALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRL 248
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+LVLDEAD+MLD+GF P +++ +SK
Sbjct: 249 DETKFLVLDEADQMLDIGFLPAVKRIISK 277
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++II ++ DRQTL++SAT KE+KKL E YL D +Q+++ N + +I
Sbjct: 272 KRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV----TPENSTVDKIEQSLMH 327
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPR---EKLRTYQGT 549
K+NK + LQ I S P + I+ + + +KL + GT
Sbjct: 328 LSKQNK-GLALQRI-ISANPKKRVIVFSRTKHGSDKLVKWLGT 368
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/89 (47%), Positives = 56/89 (62%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI Q +G R T +FGG + Q R L+RGV + IATPGRL+D +++G +L
Sbjct: 82 AVQIAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDL 141
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ VLDEADRMLDMGF P ++ +SK
Sbjct: 142 SQAKTFVLDEADRMLDMGFMPALKTIVSK 170
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = +2
Query: 62 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 241
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 242 PQIRKSLSKYAQTDR 286
+I KS+ + + R
Sbjct: 365 DEI-KSIFYFFKAQR 378
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/65 (33%), Positives = 40/65 (61%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
+ RQTL++SAT P++++ A+ L I +N+G +A+ N+LQ ++ + ENKL
Sbjct: 375 KAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVR---SENKL 430
Query: 451 NVLLQ 465
+L+
Sbjct: 431 VRVLE 435
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/89 (50%), Positives = 52/89 (58%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + F R V GG QA +L RGVEIVI TPGRL D LEK T L
Sbjct: 787 AIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVL 846
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+C Y++LDEADRM+DMGFE + L K
Sbjct: 847 NQCNYVILDEADRMMDMGFEDTVHYILDK 875
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/84 (54%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTN 178
QI ++ F ++ ++GGA EQ L+RG EIVI TPGRLID L KG TN
Sbjct: 456 QISNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTN 515
Query: 179 LQRCTYLVLDEADRMLDMGFEPQI 250
L+R T+LVLDEADRM DMGF PQI
Sbjct: 516 LRRVTFLVLDEADRMFDMGFAPQI 539
Score = 46.0 bits (104), Expect = 7e-04
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I+ IRPDRQT ++SAT+P ++ LA+ L +QI +G SA+ + Q V + E
Sbjct: 542 IVGNIRPDRQTALFSATFPIMIENLAKKILAKPLQIVVGQRGKSAS-QVDQHVLVLNE-- 598
Query: 436 KENKLNVLLQEIGQSQEPG 492
E KL LL+ +G+ E G
Sbjct: 599 -EKKLLKLLKLLGEWHEHG 616
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/90 (47%), Positives = 58/90 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F + ++ ++GG + Q +L++G +I++ATPGRL D LEKG L
Sbjct: 464 AVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKL 523
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKY 271
T+LVLDEADRMLDMGF PQIR ++ Y
Sbjct: 524 FLTTFLVLDEADRMLDMGFSPQIRSIVNDY 553
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Frame = +3
Query: 495 ENNN-----FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
ENNN FVETKRKA+ I R + AVC+HGDK+Q ER+ L
Sbjct: 642 ENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERAL 688
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M+SAT+ KE++ LA++YL Y + +G + S N I Q + +E ENK N L
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFVEE---ENKCNYL 636
Query: 460 LQEIGQSQEPGAKTIILLKPREK 528
L + ++ TI+ ++ + K
Sbjct: 637 LNLLAENN--NGLTILFVETKRK 657
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/88 (50%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQ F R V GG EQ+ + +G IV+ATPGRL+D LE+ L
Sbjct: 338 AQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVL 397
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+CTY+V+DEADRMLDMGFE + K LS
Sbjct: 398 SQCTYVVMDEADRMLDMGFEDDVNKILS 425
Score = 40.3 bits (90), Expect = 0.037
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV KR E I++ + GW AV +HG K+Q++R+ +
Sbjct: 522 FVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAI 559
Score = 36.7 bits (81), Expect = 0.46
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M+SAT P V LA+ YL + + + IG++ + + ++ I + +K ++ +
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEI 509
Query: 460 LQ 465
L+
Sbjct: 510 LE 511
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 85.0 bits (201), Expect = 1e-15
Identities = 45/89 (50%), Positives = 56/89 (62%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI++V + +R C +GG K +Q+R L GV+IVI TPGRL D L K +L
Sbjct: 197 AQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRK--HHL 254
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
YLVLDEADRMLDMGF PQI + +
Sbjct: 255 SSVQYLVLDEADRMLDMGFMPQIESLIDQ 283
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/101 (36%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQ 426
+ +I+QI +RQTLM+SATWPKEVK LA +L D I+I +GS +L+ + N+ Q IV+I
Sbjct: 278 ESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDD 337
Query: 427 EHEKENKLNVLLQEIGQ--SQEPGAKTIILLKPREKLRTYQ 543
+ ++ +++ EI + + +P I+ + K +Q
Sbjct: 338 LSDLQSD-DLIYDEINKILTADPTNTVIVFCNEKYKCDDFQ 377
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A+QI FG +R+ VFGG Q L+RG EIV+ TPGR+ID L
Sbjct: 226 AEQINTEINKFGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRI 285
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
TNL+R T++VLDEADRM DMGF PQI++
Sbjct: 286 TNLRRVTFVVLDEADRMFDMGFGPQIKR 313
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/74 (35%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++IIE IRPD+Q +M+SAT+P V++ A ++L I+I G + ++ I QIV++ +
Sbjct: 312 KRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEIICGG-RSQVSNTIEQIVEVIET 370
Query: 430 HEK-ENKLNVLLQE 468
+K E ++++L++
Sbjct: 371 KKKIERLISIVLEQ 384
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 84.6 bits (200), Expect = 2e-15
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ ++G +R V+GG P Q + L+RG +I++ATPGRL+D L + +L
Sbjct: 89 AIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISL 148
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
++ YLVLDEADRMLD+GF I+K + YA DR
Sbjct: 149 EKLEYLVLDEADRMLDLGFIDPIQK-IMDYAADDR 182
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
QKI++ DRQTL+++AT + V+ LAE YL + +I + +A I Q
Sbjct: 172 QKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAK-QIRQFAYQVDY 230
Query: 430 HEKENKLNVLLQE 468
+K + L+ L+ E
Sbjct: 231 GQKADILSYLITE 243
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 489 WCENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
W + FV TK++ + +++ + + G A +HG+K+Q+ER +L
Sbjct: 246 WGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRML 289
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TN 178
QI + +G V+GG+ Q DL+RG EIV TPGR+ID L G+ TN
Sbjct: 205 QIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITN 264
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L+R TY+VLDEADRM DMGFEPQI + L+
Sbjct: 265 LRRVTYMVLDEADRMFDMGFEPQITRILA 293
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I+ +RPDRQT+M+SAT+P ++ LA L + I+I IG + N +I Q+V++ E
Sbjct: 290 RILANLRPDRQTVMFSATFPHTMEALARAALDNPIEIQIGGKSV-VNSDIEQLVELRPE- 347
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREK 528
E++ +L+ +G+ E G K II + ++K
Sbjct: 348 --EDRFLRVLELLGEWYERG-KIIIFVASQDK 376
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F + + ++ V+GG R Q+ ++ G I++ TPGRLIDF+ +G N
Sbjct: 394 AIQIFKEAVKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNF 453
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
C +LVLDEADRMLDMGF +++K
Sbjct: 454 SACKFLVLDEADRMLDMGFMGEVKK 478
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/69 (28%), Positives = 45/69 (65%)
Frame = +1
Query: 268 IRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
++ +R TLM+SAT+P EV++LA ++L +YI + +G++ + + ++++I + +
Sbjct: 487 VKVERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGACMDVLQEVIEIDAKSRIDRL 546
Query: 448 LNVLLQEIG 474
L +L ++ G
Sbjct: 547 LEILTEKEG 555
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/101 (43%), Positives = 60/101 (59%)
Frame = +2
Query: 35 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 214
G S N C+ GG+ +EQ+ ++RGV +V+ATPGRL+D L+K L C YLVLDEA
Sbjct: 154 GFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEA 212
Query: 215 DRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
DRM+DMGFE +R S + + PKK +N +
Sbjct: 213 DRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 253
Score = 37.5 bits (83), Expect = 0.26
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I + RQTL++SAT PK+++ A+ L + +N+G +A+ +++Q V+ ++
Sbjct: 227 IFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDVIQEVEYVKQEA 285
Query: 436 KENKLNVLLQE 468
K L LQ+
Sbjct: 286 KVVYLLECLQK 296
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/93 (44%), Positives = 56/93 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQ+ + + S V + V+GG EQ R L G I++ATPGRL+D L K +L
Sbjct: 96 AQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSL 155
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQT 280
+ T+LV DEADRMLDMGF+ +I + L + T
Sbjct: 156 SQLTHLVFDEADRMLDMGFKDEIVEVLKRLPST 188
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+QIQ V G + +R+ ++GG + Q + L RGVEI + PGRL+D LE+GT L
Sbjct: 83 AEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTL 142
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+ L+LDEAD+M DMGF P +R+ L
Sbjct: 143 EHLDMLILDEADQMFDMGFLPDVRRIL 169
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTN 178
QI + A +G V+GG+ Q +L+RG EIV TPGR+ID L G TN
Sbjct: 418 QIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITN 477
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L+R TY+VLDEADRM DMGFEPQI + L+
Sbjct: 478 LRRVTYIVLDEADRMFDMGFEPQITRILA 506
Score = 51.2 bits (117), Expect = 2e-05
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I+ +RPDRQT+M+SAT+P ++ LA L + ++I IG + N +I Q+V+I E
Sbjct: 503 RILANLRPDRQTVMFSATFPHTMEALARAALENPVEIQIGGKSV-VNSDIDQVVEIRPE- 560
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREK 528
E++ +L+ +G+ E G K II + ++K
Sbjct: 561 --EDRFLRVLELLGEWCERG-KIIIFVASQDK 589
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 489 WCENNN---FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
WCE FV ++ KA++ + + + G+P + +HG K Q +R +
Sbjct: 574 WCERGKIIIFVASQDKADSTFKELLKSGYPCLSLHGSKEQSDRHSTI 620
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +2
Query: 32 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 208
F + + + + ++GG ++Q L G I+IATPGRL+D +E+G L+ C YLVLD
Sbjct: 266 FAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYLVLD 325
Query: 209 EADRMLDMGFEPQIRK 256
EADRMLDMGFEPQIR+
Sbjct: 326 EADRMLDMGFEPQIRQ 341
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+ +R T M+SAT+PKE++ LA+D+L +Y+ + +G + S + NI+Q + +E EK +
Sbjct: 351 KEERVTAMFSATFPKEIQLLAQDFLKQNYVFLAVGRVG-STSENIMQKIVWVEEDEKRSY 409
Query: 448 LNVLLQEIGQS 480
L LL G S
Sbjct: 410 LMDLLDATGDS 420
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR A +++ + R + V +HGD Q ER++ L
Sbjct: 426 FVETKRGASDLAYYLNRQNYQVVTIHGDLKQFEREKHL 463
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI Q A + + ++GGAP+R Q L R +IV+ TPGR+IDF+E G +L
Sbjct: 225 ANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSL 284
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+ ++LV+DEADR+++MGFE QI
Sbjct: 285 KNISFLVVDEADRLMEMGFEQQI 307
Score = 68.1 bits (159), Expect = 2e-10
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I IRPDRQ L WSATWPK+V AE ++ I++ IGS QL+AN NI Q I
Sbjct: 310 IFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVP--T 367
Query: 436 KENKLNVLLQEIGQ--SQEPGAKTIILL---KPREKLRTYQGT*GD 558
+K++ L+ +G+ S + A+T+I K + L+ Y + GD
Sbjct: 368 DADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGD 413
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 217
HT +R+ VFGG Q +L RGVEI+IATPGRL+D +++ T NL + LVLDEAD
Sbjct: 113 HTP-LRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEAD 171
Query: 218 RMLDMGFEPQIRKSLS 265
RMLDMGF P +++ L+
Sbjct: 172 RMLDMGFLPDLQRILN 187
Score = 41.5 bits (93), Expect = 0.016
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q+I+ + +RQTL++SAT+ E+KKLA YL + I + +A+ + QIV E
Sbjct: 183 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAAS-TVTQIVYDVAE 241
Query: 430 HEKENKLNVLLQE 468
+K+ + L+++
Sbjct: 242 GDKQAAVVKLIRD 254
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/95 (43%), Positives = 58/95 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + T V+ T ++GG +Q +DLE+GV+IV+ TPGR+ID L + T +L
Sbjct: 101 ALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDL 160
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
YLVLDEADRMLDMGF + + + + + R
Sbjct: 161 SHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKR 195
Score = 33.5 bits (73), Expect = 4.3
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQIN 366
+II++ +++T ++SAT PKE+ +A ++ +YI ++
Sbjct: 185 EIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVS 222
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TK + + IS+ + G+ A +HGD +Q +R+ VL
Sbjct: 264 FCQTKLEVDEISKKLLDLGYNADGLHGDYSQYQRERVL 301
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 83.4 bits (197), Expect = 4e-15
Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTT 175
A QI A F + R+ ++GGA K +Q R L G ++V+ATPGRL DFLE G T
Sbjct: 185 AIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFT 244
Query: 176 ---NLQRCTYLVLDEADRMLDMGFEPQIRK 256
+ + Y+VLDEADRMLDMGFEPQI+K
Sbjct: 245 APVSAVKAAYVVLDEADRMLDMGFEPQIKK 274
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/81 (37%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQIVDIC 423
+KI + RQT+M++ATWPK V+K+A+ + +IQI G +L+AN +I Q V++
Sbjct: 273 KKIFKLCPSARQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSITQTVEVV 332
Query: 424 QEHEKENK-LNVLLQEIGQSQ 483
+E EK ++ + +L +E+G+++
Sbjct: 333 EEEEKFDRCVAILKKELGKNE 353
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAV-CMHGDKTQQERDEVL 620
F TKR+ + + R +++ G+ + +HGDK Q ER+ VL
Sbjct: 358 FAGTKRRCDFLDRRLKQVGFSSAGSIHGDKDQYEREMVL 396
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI+ F +R + GG +QA L G EIVIATPGRL D +E+ L
Sbjct: 356 AQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVL 415
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+CTY+V+DEAD+M+DMGFEPQ+
Sbjct: 416 SQCTYVVMDEADKMVDMGFEPQV 438
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 83.4 bits (197), Expect = 4e-15
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---T 175
QQI F +R V+GG+ +Q +L+RG EIV+ TPGR+ID L + T
Sbjct: 616 QQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKIT 675
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRK 256
NL+R T+LV+DEADRM DMGFEPQI +
Sbjct: 676 NLRRVTFLVMDEADRMFDMGFEPQITR 702
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/119 (29%), Positives = 69/119 (57%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+II+ IRP+RQT+++SAT+P++V+ LA L ++I +G + N +I Q+V++ E
Sbjct: 702 RIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPES 760
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREKLRTYQGT*GDMAGQLFACMAIKLNKKE 609
++ + LL+ +G+ E G K ++ ++ +EK DM + C+++ K +
Sbjct: 761 DRFLR---LLELLGEWSEKG-KILVFVQSQEKCDALY---RDMIKSSYPCLSLHGGKDQ 812
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 83.0 bits (196), Expect = 5e-15
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G + + + GG P EQ LE+GV+++IATPGRL+D E+G L
Sbjct: 85 AAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
C LV+DEADRMLDMGF P I +K
Sbjct: 145 SSCEMLVIDEADRMLDMGFIPDIETICTK 173
Score = 38.7 bits (86), Expect = 0.11
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ-IVDICQ 426
+ I ++ RQTL++SAT P +KKLA+ +L + QI I S +AN I Q ++++
Sbjct: 168 ETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQIEI-SRPATANTLIDQRLIEVSP 226
Query: 427 EHEKENKLNVLLQE 468
+K+ ++L E
Sbjct: 227 RSKKKKLCDMLRAE 240
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 83.0 bits (196), Expect = 5e-15
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + AD + + + VFGG R Q + L RGV+I++ATPGRL+D +E+ +L
Sbjct: 90 AVQIAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDL 149
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ +L+LDEADRMLDMGF + K + K
Sbjct: 150 RETRHLILDEADRMLDMGFVRDVMKIVGK 178
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 83.0 bits (196), Expect = 5e-15
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+++ + + + T V+GG +Q DL+RGV++V ATPGRL+D +E+GT L
Sbjct: 214 ALQVEEAFQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTL 273
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
LVLDE DRMLDMGF P +++ + + Q
Sbjct: 274 ADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQ 305
Score = 36.3 bits (80), Expect = 0.61
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 372
++I++Q RQTL +SAT P E+ +LA L D ++I IG
Sbjct: 297 KRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIG 337
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 83.0 bits (196), Expect = 5e-15
Identities = 42/93 (45%), Positives = 54/93 (58%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F H+S + +GGA Q + + G I++ATPGRL+DFLEKG
Sbjct: 351 AIQIMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVF 410
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQT 280
YLVLDEADRMLDMGF I+ ++ T
Sbjct: 411 SSLKYLVLDEADRMLDMGFLSSIKTVINHKTMT 443
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/91 (30%), Positives = 57/91 (62%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 456
+R TLM+SAT+P E+++LA +L +Y+ + +G++ +AN ++ Q V + EK+ KL
Sbjct: 447 ERITLMFSATFPHEIQELASAFLNNYLFVVVGTVG-AANTDVKQEVLCVPKFEKKAKLVE 505
Query: 457 LLQEIGQSQEPGAKTIILLKPREKLRTYQGT 549
+ +EI S + + I++ ++++ + GT
Sbjct: 506 MCEEILISADD--EKILVFVEQKRVADFVGT 534
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 83.0 bits (196), Expect = 5e-15
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F + + VR V+GG Q R++ +G IV TPGRL+D +++G L +
Sbjct: 370 QIFLEARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTK 429
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
YLVLDEADRMLDMGFEP +R+
Sbjct: 430 LRYLVLDEADRMLDMGFEPDMRR 452
Score = 40.3 bits (90), Expect = 0.037
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+ +RQTL++SAT+P++++KLA D+L DY+ + +G + A ++ Q ++ K +
Sbjct: 462 KENRQTLLFSATYPQDIQKLAADFLKTDYLFLAVGIVG-GACSDVEQTFVQVTKYSKREQ 520
Query: 448 LNVLLQEIGQSQ 483
L L+ IG +
Sbjct: 521 LLDFLKTIGNER 532
Score = 36.7 bits (81), Expect = 0.46
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR+A+ I+ + + P +HGD+ Q+ER++ L
Sbjct: 536 FVETKRQADFIATFLCQEELPTTSIHGDREQREREQAL 573
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 83.0 bits (196), Expect = 5e-15
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 220
+R C GG+ ++Q DL+RGVEIV+ATPGRLID L + L +R T++V+DEADR
Sbjct: 381 IRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADR 440
Query: 221 MLDMGFEPQIRKSLSKYAQTDR 286
+ DMGFEPQI + + K + D+
Sbjct: 441 LFDMGFEPQITQ-IMKTVRPDK 461
Score = 41.9 bits (94), Expect = 0.012
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDI-CQE 429
+I++ +RPD+Q +++SAT+P +++ A L D + + I S L N N+ Q I E
Sbjct: 452 QIMKTVRPDKQCVLFSATFPNKLRSFAARILTDPLTVTINSNNL-VNENVNQSFYIEDNE 510
Query: 430 HEKENKL-NVL 459
++K N+L N+L
Sbjct: 511 NDKFNRLVNIL 521
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + +G + + +T +FGG + Q L++G++I+IATPGRL+D + +G +L
Sbjct: 168 AIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHL 227
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ + VLDEADRMLDMGF IRK L++
Sbjct: 228 RNIEFFVLDEADRMLDMGFIHDIRKILAE 256
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 82.6 bits (195), Expect = 7e-15
Identities = 43/94 (45%), Positives = 53/94 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI F R V GG QA +L +GVEI+I TPGR+ D LEK T L
Sbjct: 670 AIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVL 729
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTD 283
+C Y++LDEADRM+DMGFE + L K T+
Sbjct: 730 NQCNYVILDEADRMMDMGFEDSVHFILDKIPTTN 763
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 82.6 bits (195), Expect = 7e-15
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI V + G +++ CV+GG+ K Q + GV+IVI TPGRL D +E L
Sbjct: 204 AVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRL 263
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+++VLDEADRMLDMGFE +R LS
Sbjct: 264 SDVSFVVLDEADRMLDMGFEEPVRFILS 291
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/88 (35%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEH 432
I+ RQ +M+SATWP +V KLA++++ + I++ IGS+ L+ANH+++QI+++ E
Sbjct: 289 ILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDER 348
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLK 516
++ +L LL++ +SQ+ L K
Sbjct: 349 ARDQRLIALLEKYHKSQKNRVLVFALYK 376
Score = 35.9 bits (79), Expect = 0.80
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F K +AE + R +++ GW AV +HG+K Q ER L
Sbjct: 372 FALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSL 409
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTTN 178
AQQ + + FG +++ C+FGG K QAR+L ++ +V+ TPGR +D + G +
Sbjct: 267 AQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELD 326
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L +YLVLDEADRMLD GFE IR+ ++
Sbjct: 327 LSSVSYLVLDEADRMLDAGFENDIRRIIA 355
Score = 55.6 bits (128), Expect = 9e-07
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDI 420
RQT+M+SATWP+ V++LA +L + ++I +GS +LSAN I QIV++
Sbjct: 364 RQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQIVEV 410
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F K++A+ + IRR G+ +HGD TQ+ R + L
Sbjct: 445 FALYKKEAQRLEYTIRRAGYAVGALHGDMTQEARFKAL 482
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 82.2 bits (194), Expect = 9e-15
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQ+ + + +R CV+GG Q LE G +I+IATPGRL+D L G N+
Sbjct: 90 AQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNI 149
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ LVLDEADRMLDMGF P +++ L +
Sbjct: 150 SKTGVLVLDEADRMLDMGFWPDLQRILRR 178
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 480 SRTWCENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
SR W + F +TK+ ++ +++ ++ G AV ++GDK+Q R L
Sbjct: 244 SRNWQQVLVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRAL 290
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q+I+ ++ D+Q +++SAT+ K +K +A + +++ + +A + Q+V +
Sbjct: 173 QRILRRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTA-ETVKQMVYPVDK 231
Query: 430 HEKENKLNVLL 462
K L L+
Sbjct: 232 KRKRELLAYLI 242
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 82.2 bits (194), Expect = 9e-15
Identities = 40/88 (45%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + +G +R VFGG Q L+ GVEI++ATPGRL+D +E+ N
Sbjct: 94 AMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNF 153
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ LVLDEADRMLDMGF P I++ ++
Sbjct: 154 SKTEILVLDEADRMLDMGFLPDIKRVMA 181
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 414
++++ + P RQ+LM+SAT+ E++KLA+ L ++I ++Q + N +I ++
Sbjct: 177 KRVMALLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-AAVQNTVNESISHVI 230
Score = 36.7 bits (81), Expect = 0.46
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+TK A ++++ + R+ AV +HGD+ QQ+R + L
Sbjct: 257 FVKTKHGASHLAQMLSRHEISAVAIHGDRNQQQRTQAL 294
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 82.2 bits (194), Expect = 9e-15
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F +R +C GG+ E +++G E+VI TPGR+ID L
Sbjct: 489 ASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRV 548
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
TN++R TY+V+DEADRM DMGFEPQ+ K ++
Sbjct: 549 TNVRRTTYIVMDEADRMFDMGFEPQVMKIIN 579
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KII +RP Q +++SAT+PK ++ LA L ++I +G + A I Q V++
Sbjct: 576 KIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVA-PEIDQRVEVRDGD 634
Query: 433 EKENKLNVLLQEIGQ--SQEPGAKTIILLKPRE 525
K +L +L E+G+ E +T+I + +E
Sbjct: 635 TKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQE 667
Score = 32.3 bits (70), Expect = 9.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+ + A+++ R + + G+ +HG K Q +RDE +
Sbjct: 662 FVDRQESADDLFRELLQRGYVCASLHGGKEQVDRDEAI 699
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/93 (43%), Positives = 60/93 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + + +R+T V+GG Q + L RGVE+VIATPGRL+D +++ + NL
Sbjct: 109 ADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINL 168
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQT 280
+ LVLDEADRMLDMGF P +++ ++ +T
Sbjct: 169 GQVQVLVLDEADRMLDMGFLPDLQRIINLLPKT 201
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV-DICQ 426
Q+II + RQ L++SAT+ E++KLA+ ++ I + + + + + NI Q++ +
Sbjct: 192 QRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV-ARRNATSENIKQVIFALDS 250
Query: 427 EHEKENKLNVLLQEIGQSQ 483
E +K + L+Q SQ
Sbjct: 251 EEDKRMAVCHLIQSKALSQ 269
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q + F + +R ++GG+ R Q +LERG +I +ATPGRL D +E+
Sbjct: 342 AVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGRLTDLVERRKIVF 401
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
YLVLDEADRMLDMGF PQI+ LS T +
Sbjct: 402 SCIKYLVLDEADRMLDMGFSPQIKSILSHPTMTSNV 437
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/89 (29%), Positives = 53/89 (59%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M+SAT+PKE+++LA ++L DYI + +G + S N I Q + +++ K+ L
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAVGRVG-STNEFIKQRLLYA---DQDQKIKYL 561
Query: 460 LQEIGQSQEPGAKTIILLKPREKLRTYQG 546
++ + + G +I ++ +++ +G
Sbjct: 562 IKLLKDNTNLGGLVLIFVETKKRADLIEG 590
Score = 35.9 bits (79), Expect = 0.80
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK++A+ I + + AV +HGD++Q++R++ L
Sbjct: 578 FVETKKRADLIEGYLLSENFKAVNIHGDRSQEDREKAL 615
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---T 175
QQI F + V+GG+ +Q +L+RG EIV+ TPGR+ID L + T
Sbjct: 483 QQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKIT 542
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRK 256
NL+R TYLV+DEADRM DMGFEPQI +
Sbjct: 543 NLRRVTYLVMDEADRMFDMGFEPQITR 569
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/92 (35%), Positives = 61/92 (66%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I++ IRPDRQT+++SAT+P++V+ LA L ++I +G + N +I Q+V+I E
Sbjct: 569 RIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQLVEIRPES 627
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREK 528
E+ ++ LL+ +G+ E G K ++ ++ +EK
Sbjct: 628 ERFSR---LLELLGEWYEKG-KVLVFVRSQEK 655
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI A F VFGG + Q +L+RG EIV+ATPGRLID L
Sbjct: 793 ATQIYLEAKPFLKAYKYEIVAVFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKI 852
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
TNL+R T +V+DEADRM D+GFEPQI K L+
Sbjct: 853 TNLKRITMVVIDEADRMFDLGFEPQIAKILA 883
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQIVDICQE 429
KI+ RPD+QT+++SAT+PK V+ LA+ + +++ +G+ + A NI Q+++I
Sbjct: 880 KILATTRPDKQTVLFSATFPKNVENLAKKLMRHKPVEVVVGA-RGQACTNITQLIEI--- 935
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIILLKPREKLRTYQ 543
++ +L LL+ +G E G I + K E YQ
Sbjct: 936 RDESTRLFRLLELLGIYTEQGQVIIFVDKQIEVDFLYQ 973
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQ 184
QI + A G + V V+GGA +Q L+RG +IV+ATPGRLIDF K N
Sbjct: 183 QIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFD 242
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLS 265
C LV+DEADRMLDMGF P +R+ +S
Sbjct: 243 NCQTLVIDEADRMLDMGFIPDVRRIVS 269
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 AQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A Q+++ A +G R C+ GGAP Q + L + V++V+ATPGRLID LE+G +
Sbjct: 86 ALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKID 145
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIR 253
R LVLDEADRMLDMGF I+
Sbjct: 146 FSRLEVLVLDEADRMLDMGFVDDIK 170
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GG REQ L++G +IVIATPGRL DFLE+ +L+ +VLDEAD+MLDMGFEP
Sbjct: 81 VYGGEGAREQRGLLKKGCDIVIATPGRLKDFLERRCLSLKYVRVMVLDEADKMLDMGFEP 140
Query: 245 QIRKSLSKY 271
QIR + K+
Sbjct: 141 QIRDLVYKF 149
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + + +R GG +R Q RD+ G IV+ATPGRL DF+ +G NL
Sbjct: 85 ALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L+LDE+DRMLDMGF P I++ ++
Sbjct: 145 TTVRMLILDESDRMLDMGFLPTIKRIIA 172
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +1
Query: 154 FLGKGHNQLTAVHIFSS**G*SYVGYGI*TTNQKIIEQIRPDRQTLMWSATWPKEVKKLA 333
F+ +G LT V + + G T ++II + +RQTL++SAT VK+L
Sbjct: 136 FMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Query: 334 EDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQE 468
E ++ + ++I +GS+ + L + ++ Q+ K L ++L+E
Sbjct: 196 ETHVRNAVRIELGSISKPSEQVDLHLYEVDQD-RKFGLLEMMLRE 239
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/80 (55%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLE-KGTT 175
A QI A F C +FGGA K EQ + L G EIV+ATPGRLID L K +
Sbjct: 189 ATQIANEANAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVKNSI 248
Query: 176 NLQRCTYLVLDEADRMLDMG 235
+L+R TYL LDEADRMLDMG
Sbjct: 249 DLRRVTYLALDEADRMLDMG 268
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQI++ +F R + GG +QA + +G EI+IATPGRL D LEK L
Sbjct: 503 QQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLN 562
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSL 262
+C Y+VLDEAD M+D+GFEPQ+ L
Sbjct: 563 QCNYIVLDEADMMIDLGFEPQVTSVL 588
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI+ A F + V GG +EQA ++ G E+++ATPGRL+D +++ L
Sbjct: 252 AMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVL 311
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+C Y+V+DEADRM+DMGFE Q++K L+
Sbjct: 312 NQCCYVVMDEADRMVDMGFEEQVQKVLA 339
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
RQT+M++AT P ++KLA+ YL + IGS A + Q+V+ EK +
Sbjct: 365 RQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAG-QAGSTVTQLVEFLNTDEKRKR 419
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTT 175
A Q ++ A G + + C++GG K+EQ R L + V IV+ TPGR++D G+
Sbjct: 252 AIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSL 311
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIR 253
+L TYLVLDEADRMLD GFEP IR
Sbjct: 312 DLSGVTYLVLDEADRMLDKGFEPDIR 337
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKENKLNV 456
R T M+SATWP V+ LAE ++ +++ +GS +LSAN + Q V++ + + KE +LN
Sbjct: 350 RHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLND 409
Query: 457 LLQEIGQSQEPGAKTIILLKPREKLRTYQ 543
L+ + + I L +E R Q
Sbjct: 410 FLRSVNAQRSKDKILIFALYKKEAQRIEQ 438
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = +2
Query: 62 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 232
C GGA Q DL+RG EIV+ TPGR+ID L TNL+R TY+V+DEADRM D+
Sbjct: 610 CCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVTYVVIDEADRMFDL 669
Query: 233 GFEPQIRK 256
GFEPQI K
Sbjct: 670 GFEPQICK 677
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KII+ IRPDRQ +M+SAT+PK V++LA+ L I+ +G + A NI QI++ E
Sbjct: 677 KIIQNIRPDRQLVMFSATFPKNVEQLAKRVLRKPIECIVGG-RGQAGGNIEQIIEFMDES 735
Query: 433 EKENKLNVLLQE 468
+K KL +L QE
Sbjct: 736 DKLYKLLLLFQE 747
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/108 (38%), Positives = 64/108 (59%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI Q + F + + +GG + +QA+ ++R +I++A PGRL DFL++G +L +
Sbjct: 192 QIAQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSK 251
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
TYLV+DEADR+LDMGFE +R + + Q + PK RNL
Sbjct: 252 VTYLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNL 299
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQIVDICQEH 432
I+++ R DRQT+ +SATWPK V+ L+ D+ D I + +G L+ N NI Q + IC +
Sbjct: 275 IVQRTRQDRQTVFFSATWPKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNIDQEI-ICLYN 333
Query: 433 EKENKLNVLLQEIGQ 477
+ KL LL + Q
Sbjct: 334 NQ--KLQTLLDILDQ 346
Score = 37.9 bits (84), Expect = 0.20
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F ET+ E +S ++ + G+ AV +HG+KTQ +RD ++
Sbjct: 356 FAETRISCEQLSVDMTQEGYYAVALHGNKTQGQRDSIM 393
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTT 175
AQQI++ G VR+TC+ GG +QARDL R I+IATPGRL+D LE KG
Sbjct: 162 AQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKG-F 220
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSL 262
+L++ +LV+DEADR+LDM F P + + L
Sbjct: 221 SLRKLKFLVMDEADRLLDMEFGPVLDRIL 249
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/87 (47%), Positives = 53/87 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI++ F + + G +QA L +G EIVIATPGRL+D LE+ L
Sbjct: 299 AHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVL 358
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+C YLVLDEADRM+DM FEPQ+ + L
Sbjct: 359 NQCNYLVLDEADRMIDMDFEPQVSEVL 385
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/96 (40%), Positives = 55/96 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A FG + + GG E + GV IV+ATPGRLID LE+G NL
Sbjct: 250 ALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINL 309
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
C + +DEAD+M+DMGFE ++ L+ +++L
Sbjct: 310 SNCYFFTMDEADKMIDMGFEKSLQSILNYLPASEKL 345
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/96 (42%), Positives = 53/96 (55%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+R+ GG P E + RGV IV+ATPGRL+D L+K L C YL +DEADRM+D
Sbjct: 288 IRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMID 347
Query: 230 MGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
MGFE +R S + + PKK +N R
Sbjct: 348 MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFAR 383
Score = 37.1 bits (82), Expect = 0.35
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I + RQTL++SAT PK+++ A L + IN+G +A+ N+ Q V+ ++
Sbjct: 357 IFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQVEYVKQEA 415
Query: 436 K 438
K
Sbjct: 416 K 416
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/88 (42%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+D +++
Sbjct: 86 AAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKF 145
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ LVLDEADRMLDMGF I+K L+
Sbjct: 146 NQLEILVLDEADRMLDMGFIRDIKKILA 173
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 79.8 bits (188), Expect = 5e-14
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
Q+ A F + S ++ ++GG QA L G +++ATPGRL DF+++G N Q
Sbjct: 544 QLFTEARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQN 603
Query: 188 CTYLVLDEADRMLDMGFEPQI 250
YL+LDEAD+M+DMGF PQI
Sbjct: 604 LKYLILDEADKMIDMGFGPQI 624
Score = 41.1 bits (92), Expect = 0.021
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
R TLM+SAT+P +++ LA +L DY+ + +G + + ++ + ++E L L
Sbjct: 639 RNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCTDVTQSVIQVSGTKKRET-LENL 697
Query: 460 LQEIGQSQ 483
LQ G Q
Sbjct: 698 LQTSGTDQ 705
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 79.8 bits (188), Expect = 5e-14
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI Q F S ++ +GG Q L G I++ATPGRL+DF+EKG
Sbjct: 288 QIWQQIVKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSS 347
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
+LVLDEADRMLDMGF P I K
Sbjct: 348 VQFLVLDEADRMLDMGFLPSIEK 370
Score = 40.3 bits (90), Expect = 0.037
Identities = 25/84 (29%), Positives = 49/84 (58%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 456
+RQTLM+SAT+P EV+ LA +L +Y+ + +G + A ++ Q ++K++ L
Sbjct: 382 ERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVG-GACSDVEQNFYEVARNKKKDLLKE 440
Query: 457 LLQEIGQSQEPGAKTIILLKPREK 528
+L+ S G T++ ++ ++K
Sbjct: 441 ILERENDSGTLGG-TLVFVEMKKK 463
Score = 36.7 bits (81), Expect = 0.46
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE K+KA+ I+ + +P +HGD+ Q++R+E L
Sbjct: 457 FVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEAL 494
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADR 220
+R V+GG+P EQ L+RGVEIV TPGRLI+ L G TNL+R T++V+DEADR
Sbjct: 490 IRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADR 549
Query: 221 MLDMGFEPQI 250
M D+GF PQI
Sbjct: 550 MFDLGFSPQI 559
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I++ IRPDRQT ++SAT+P ++ LA+ L +QI +G SA+ + Q V + E +
Sbjct: 562 IVDNIRPDRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKSAS-QVDQHVMVLPERQ 620
Query: 436 KENKLNVLLQEIGQSQEPGA 495
K+ LL+ +G+ E G+
Sbjct: 621 ---KMYALLKLLGEWHEHGS 637
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 79.8 bits (188), Expect = 5e-14
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 220
+R+ C GG+ + Q D++RGVEIVIATPGR ID L + NL +R ++V+DEADR
Sbjct: 341 IRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKRIVFVVMDEADR 400
Query: 221 MLDMGFEPQIRK 256
+ D+GFEPQ+ +
Sbjct: 401 LFDLGFEPQVNQ 412
Score = 49.2 bits (112), Expect = 8e-05
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I++ IRPD+Q +++SAT+P ++K A L D + I + S L N NI Q V+I
Sbjct: 412 QIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYITVNSKSL-INENIEQKVEIFSNE 470
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPRE 525
E + K + + Q KTI+ + ++
Sbjct: 471 EDKFKSLIHWLALTQQNLNDEKTIVFVSSQQ 501
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI+ A F + + GG EQ+ L G EI+IATPGRL+D +E+ L
Sbjct: 468 AQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVL 527
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+C Y+++DEADRM+D+GFE + K L
Sbjct: 528 SQCCYVIMDEADRMIDLGFEEPVNKIL 554
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVSV 629
FV KR + ++R+I++ G+ +V +HG KTQ++R+ L SV
Sbjct: 658 FVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 698
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ +G +R+ +FGG ++ Q L++GV+I++ATPGRL+D +G +L
Sbjct: 85 ALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
R VLDEADRMLDMGF +R+ L
Sbjct: 145 SRLEIFVLDEADRMLDMGFLHDVRRVL 171
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 79.4 bits (187), Expect = 7e-14
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
AQQI +VA T +V T V GG + Q L+ G +I++ATPGRL+D +E+G +
Sbjct: 151 AQQIDEVAGKIADVTGHVAVTVV-GGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACH 209
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRK 256
L LVLDEADRMLDMGF P +R+
Sbjct: 210 LDEVKVLVLDEADRMLDMGFLPAVRR 235
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + F + VR ++GG Q L+RG EI++ATPGRLID +++G+ ++
Sbjct: 82 AVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISI 141
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
R T+LVLDEAD MLDMGF I+
Sbjct: 142 DRVTHLVLDEADTMLDMGFIDDIQ 165
Score = 33.5 bits (73), Expect = 4.3
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 KIIEQIRPDRQTL-MWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+ I + PD + + ++SAT P E+ +L+E+YL + Q + + LS I Q + ++
Sbjct: 165 QFILDLTPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDADDLS-GEGIDQSYLVIRD 223
Query: 430 HEKENKLNVLLQEIGQSQ 483
EK + L ++E G+ Q
Sbjct: 224 REKMDYLVDFIKENGKGQ 241
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +2
Query: 62 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 241
CV+GG PK EQ L++ ++V+ATPGRL+D L++G+ +L + YLVLDEADRML+ GFE
Sbjct: 215 CVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFE 273
Query: 242 PQIR 253
I+
Sbjct: 274 EDIK 277
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQIVDICQEHEKENKLNV 456
RQTLM++ATWPKEV++LA ++ + I+++IG+ QL+AN I QIV++ KE KL
Sbjct: 288 RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLE 347
Query: 457 LLQEIGQSQEPGAKTII 507
LL++ + K +I
Sbjct: 348 LLKKYHSGPKKNEKVLI 364
Score = 33.9 bits (74), Expect = 3.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F K++A + RN++ G+ +HGD +QQ+R + L
Sbjct: 365 FALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQAL 402
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/100 (41%), Positives = 53/100 (53%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 217
H +R GG P E + RGV I++ATPGRL+D L+K L C YL +DEAD
Sbjct: 286 HCPEIRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEAD 345
Query: 218 RMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
RM+DMGFE +R S + + PKK +N R
Sbjct: 346 RMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFAR 385
Score = 37.9 bits (84), Expect = 0.20
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEK 438
RQTL++SAT PK+++ A L + IN+G +A+ N++Q V+ ++ K
Sbjct: 367 RQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVIQEVEYVKQEAK 418
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 79.0 bits (186), Expect = 9e-14
Identities = 40/92 (43%), Positives = 52/92 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ A F S +R ++GG Q L+RGV IV+ TPGR+ID LE+G L
Sbjct: 84 AIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
+ + VLDEAD ML MGF + K LS+ Q
Sbjct: 144 DQVKWFVLDEADEMLSMGFIDDVEKILSQAPQ 175
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ Q DRQT ++SAT P ++ L +L + + + + + N I Q+ +
Sbjct: 167 EKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKATPN-KINQVAYLIPR 225
Query: 430 HEKENKLNVLLQEIGQSQEPGAKTIIL 510
H + + LQ I + ++P I +
Sbjct: 226 HWTKAR---ALQPILEMEDPETALIFV 249
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 79.0 bits (186), Expect = 9e-14
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ A + + + VFGG +Q R LE+ V++VI TPGR+ID+ G+ L
Sbjct: 212 AMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKL 271
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ LV+DEADRMLDMGF P +++ +S+
Sbjct: 272 SKVEVLVIDEADRMLDMGFIPDVKRIVSQ 300
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/95 (43%), Positives = 56/95 (58%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + F + ++GGAP +Q R L++GV++V+ATPGR I F+E G L
Sbjct: 84 AIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLEL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
YLVLDEAD ML+MGF + K L K + DR
Sbjct: 144 DSLEYLVLDEADEMLNMGFVEDVEKVL-KASPDDR 177
Score = 37.1 bits (82), Expect = 0.35
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+K+++ DR LM+SAT P +KK+AE Y+ + I I S + I Q+V E
Sbjct: 167 EKVLKASPDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKS-ETMTMETIDQVV---YE 222
Query: 430 HEKENKLNVL 459
ENK L
Sbjct: 223 AYPENKFAAL 232
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 79.0 bits (186), Expect = 9e-14
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +2
Query: 2 AQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A QI + F + +R+ C GG+ ++Q DL+RG EIV+ATPGR ID L
Sbjct: 343 ALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGK 402
Query: 179 L---QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
L +R T++V+DEADR+ D+GFEPQI + + K + D+
Sbjct: 403 LLSTKRITFVVMDEADRLFDLGFEPQITQ-IMKTVRPDK 440
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I++ +RPD+Q +++SAT+P +++ A L I I I S + N N+ Q IC H
Sbjct: 431 QIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGM-VNENVKQKFRIC--H 487
Query: 433 EKENKLNVLLQEIGQSQE 486
++ K + L+Q I + E
Sbjct: 488 SEDEKFDNLVQLIHERSE 505
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Frame = +2
Query: 62 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDM 232
C +GG+P ++Q L++G I++ TPGR+ID L +L R T+LV+DEADRM DM
Sbjct: 492 CAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDM 551
Query: 233 GFEPQIRKSLSKYAQTDR 286
GFEPQ+ K L++ + DR
Sbjct: 552 GFEPQVLK-LTQSIRPDR 568
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLA--------EDYLGDYIQINIGSLQLSANHNILQ 408
K+ + IRPDRQT+++SAT+PK++++LA D LG I+I +G+ + A+ I Q
Sbjct: 559 KLTQSIRPDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGP-IEIIVGARSVVAS-EITQ 616
Query: 409 IVDICQEHEKENKLNVLLQEIGQ 477
V++ Q +++K LL+ +G+
Sbjct: 617 FVEVFQ--NEKSKFPRLLEVLGK 637
Score = 34.7 bits (76), Expect = 1.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE + A+++ + + + G+P + +HG K Q +RD+ +
Sbjct: 670 FVERQESADSLLKELIQSGYPCLSIHGGKEQADRDQAI 707
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/95 (40%), Positives = 62/95 (65%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+++ + G ++ T VFG + +Q +L++ IV+ TPGR++D +EKGT L
Sbjct: 83 AVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPL 142
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
R +YLV+DEAD ML+MGF Q+ +++ K+ T+R
Sbjct: 143 DRLSYLVIDEADEMLNMGFIEQV-EAIIKHLPTER 176
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 32 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 211
+G + +T GG P Q R L +GVE+++ATPGRL+D ++ L +LVLDE
Sbjct: 112 YGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDE 171
Query: 212 ADRMLDMGFEPQIRKSLSK 268
ADRMLDMGF IRK ++K
Sbjct: 172 ADRMLDMGFINDIRKIVAK 190
Score = 37.9 bits (84), Expect = 0.20
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA---NHNILQI 411
+KI+ ++ RQTL +SAT PK++ +LA+ L D ++ + + +A N ILQ+
Sbjct: 185 RKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQV 241
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI F VR T +FGG + Q + LE GV+I++A PGRL+D +E+G +L +
Sbjct: 95 QIADGFESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQ 154
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
LVLDEAD+MLDMGF I +
Sbjct: 155 LETLVLDEADQMLDMGFAKPIER 177
Score = 32.3 bits (70), Expect = 9.9
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++I+ + DR T+++SAT PK + L E L + ++ I S I Q V
Sbjct: 176 ERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAP-PSSTVDRIAQSVMFLNA 234
Query: 430 HEKENKLNVLLQEIGQSQ 483
+K+ L L+ G Q
Sbjct: 235 SDKKAALLAQLRTPGIGQ 252
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/89 (41%), Positives = 53/89 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + + ++ ++GG Q R L R EI++ TPGRL+D + +GT +L
Sbjct: 84 AVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
Y+VLDEAD MLDMGF P I+K LS+
Sbjct: 144 SPLKYVVLDEADEMLDMGFLPDIQKILSQ 172
Score = 38.7 bits (86), Expect = 0.11
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR A+ ++R + G+ A +HGD +Q+ERD V+
Sbjct: 247 FCRTKRNADELARVLTSRGYNADALHGDMSQRERDHVM 284
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 345
QKI+ Q +RQT ++SAT P EV++L ++
Sbjct: 167 QKILSQCPRERQTFLFSATLPDEVRELGTKFM 198
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ +V+ G S +R V+GG +Q + RG I++ TPGR +D +++G N
Sbjct: 82 AVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNF 141
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ +Y VLDEAD MLDMGF I+K ++
Sbjct: 142 DKVSYFVLDEADEMLDMGFIEDIKKIIN 169
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/89 (42%), Positives = 55/89 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+Q+Q +F +R ++GG Q R LER ++V+ATPGRL+D +E+GT +L
Sbjct: 82 AEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDL 140
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
LVLDEADRMLDMGF + + + +
Sbjct: 141 GDVEILVLDEADRMLDMGFIDDVEEIIDE 169
Score = 33.1 bits (72), Expect = 5.7
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD 351
++II++ DRQT+M+SAT K+++ L+ Y+ +
Sbjct: 164 EEIIDECPSDRQTMMFSATVSKDIQYLSSKYMNN 197
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI+Q + ++++ V GG K Q + + G++++IATPGRL D + G +L
Sbjct: 173 AVQIEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDL 232
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
+ +LVLDEADRMLDMGF + K ++K +R
Sbjct: 233 SQTRWLVLDEADRMLDMGFINDV-KRIAKATHAER 266
Score = 42.3 bits (95), Expect = 0.009
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++I + +RQT ++SAT PKE+ LAE L D +++ + +A+ I Q+V
Sbjct: 256 KRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGATAS-EITQVVHPVPT 314
Query: 430 HEKENKLNVLLQE 468
EK L+ +L +
Sbjct: 315 KEKRRLLSAMLTD 327
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A +G + V GGA QAR +E GV++++ATPGRL+D + G L
Sbjct: 143 ATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRL 202
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+VLDEAD+MLD+GF P IR+ ++K
Sbjct: 203 DAVETVVLDEADQMLDLGFIPAIRQIMAK 231
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/88 (42%), Positives = 53/88 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G +R+ VFGG P Q + L GV++++ATPGRL+D ++
Sbjct: 86 AAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKF 145
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ LVLDEADRMLDMGF I+K L+
Sbjct: 146 NQLEVLVLDEADRMLDMGFIRDIKKILA 173
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI F R+ V GG QA +L +G EI+I TPGR+ D L++ T L
Sbjct: 428 ALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVL 487
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTD 283
+C Y++LDEADRM+DMGFE ++ L T+
Sbjct: 488 SQCNYVILDEADRMIDMGFEDVLKYILDCIPSTN 521
Score = 38.3 bits (85), Expect = 0.15
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV K+ + I+++I + G+ AV +HG KTQ+ R++ L
Sbjct: 614 FVNLKKNTDVITKHITKIGYRAVSLHGGKTQESREDAL 651
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTN 178
A QI+ F ++ C++GG R+ Q +L R I++ATPGRL+DFL +G T
Sbjct: 185 AMQIESEIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATT 244
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRK 256
L +YLV+DEADR+L++GFE IR+
Sbjct: 245 LANVSYLVIDEADRLLELGFEDTIRE 270
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 GI*TTNQKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQ 408
G T ++I++QIR DRQT+ +SATWPK VK LA D+ I + IG L+ N NI Q
Sbjct: 263 GFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIGKSNLTINKNIDQ 322
Query: 409 -IVDICQEHEKENKLNVL 459
I+ + Q+ + + L++L
Sbjct: 323 EIICLFQKDKLQKLLDIL 340
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F E K++ E +S N+ G+ + +HGDKTQ +RDE++
Sbjct: 352 FSEQKQRCEQLSINMADKGYYTIALHGDKTQPQRDEIM 389
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F SY++ V+GG R Q + RG +VIATPGRL+DF+++
Sbjct: 331 AIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITF 390
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ ++VLDEADRMLDMGF +R+ ++
Sbjct: 391 EDTRFVVLDEADRMLDMGFSEDMRRIMT 418
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/67 (34%), Positives = 45/67 (67%)
Frame = +1
Query: 268 IRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+RP+ QTLM+SAT+P+E++++A ++L +Y+ + IG + A ++ Q + ++ K +K
Sbjct: 422 MRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKYAKRSK 480
Query: 448 LNVLLQE 468
L +L E
Sbjct: 481 LIEILSE 487
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR A+ ++ + +P +HGD+ Q +R++ L
Sbjct: 495 FVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQAL 532
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +2
Query: 32 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 211
+G +R+ ++GG + Q + L+RG I++ATPGRL+D + +G L + VLDE
Sbjct: 98 YGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDE 157
Query: 212 ADRMLDMGFEPQIRKSLSKY-AQTDRL*CGQLLGPK 316
ADRMLDMGF P +++ +++ Q L L PK
Sbjct: 158 ADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPK 193
Score = 35.9 bits (79), Expect = 0.80
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TKR A +S+ + R G+ A +HG+K+Q R + L
Sbjct: 251 FTKTKRTANTLSQRLVRSGFKATAIHGNKSQGARQQAL 288
Score = 32.3 bits (70), Expect = 9.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 157 LGKGHNQLTAVHIFSS**G*SYVGYGI*TTNQKIIEQIRPDRQTLMWSATWPKEVKKLAE 336
+ +GH +L + +F + G ++II Q+ RQ+L +SAT ++ +LA
Sbjct: 140 MNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAH 199
Query: 337 DYLGDYIQINI 369
L + +N+
Sbjct: 200 SLLSKPVTVNV 210
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+QI + G ++ TC++GG Q + RG+++V+ TPGR++D++ K T +L
Sbjct: 187 AKQISEYFEAIG--PHLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDL 244
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTD 283
+ ++VLDE DRMLDMGF + + L +T+
Sbjct: 245 SKLKHVVLDEVDRMLDMGFAESVEEILGAAYKTE 278
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+++ + G ++ ++G +P Q +L++ IV+ TPGR++D +EKGT +L
Sbjct: 85 AVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+R YLV+DEAD ML+MGF Q+
Sbjct: 145 ERLKYLVIDEADEMLNMGFIDQV 167
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/87 (44%), Positives = 55/87 (63%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
Q++Q++ G + V VFGGA Q RD+ RG +I++ATPGRL+D +++ L
Sbjct: 101 QMEQMSKHLGKLNVVP---VFGGANIMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDA 157
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLSK 268
Y+VLDEAD ML+MGF+ I LSK
Sbjct: 158 LKYMVLDEADEMLNMGFKEDIDFILSK 184
Score = 33.9 bits (74), Expect = 3.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR +N++ + G+ +HGD +Q +RD +
Sbjct: 259 FCRTKRDTQNVADQLNNNGYATEALHGDMSQAQRDAAM 296
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/89 (41%), Positives = 50/89 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q++ A H + V+GG P R Q L+R IV+ TPGR+ID + + L
Sbjct: 87 AVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQL 146
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ +VLDEADRMLD+GF P I K L +
Sbjct: 147 EMLRTVVLDEADRMLDIGFRPDIEKILRR 175
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA 390
+KI+ + +RQTL+ SAT P ++KLA+ Y+ + +++ +SA
Sbjct: 170 EKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISA 216
>UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 370
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/73 (46%), Positives = 48/73 (65%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KII + +R TLMWSATWP+EV+ LA +Y+ DYIQ+ IG L N I Q V++ +
Sbjct: 9 KIIPKTHKNRHTLMWSATWPREVRSLANNYMKDYIQVTIGDDSLKGNIKIKQTVEVVNDR 68
Query: 433 EKENKLNVLLQEI 471
EK +KL +L+ +
Sbjct: 69 EKNDKLLSVLKSV 81
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 53 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 232
++ C+ GG Q R ++ G ++IATPGR ID L N+++ +YLV+DEADRM D+
Sbjct: 203 KSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDL 262
Query: 233 GFEPQI 250
GFEPQ+
Sbjct: 263 GFEPQV 268
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I E++R DRQTLM+SAT+P V+++A L + I+I +G L+ NI Q + + E
Sbjct: 270 RIAERMRKDRQTLMFSATFPHTVERIARKLLQNSIEIVVG-LRNVVTPNINQSILVTNE- 327
Query: 433 EKENKLNVLLQEIGQSQEPG 492
+NK N LL+ +G G
Sbjct: 328 --DNKFNSLLKILGDYTTQG 345
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + D+ +R+ VFGG Q L GV++++ATPGRL+D + L
Sbjct: 88 AAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKL 147
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ LVLDEADRMLDMGF IR+ L+K
Sbjct: 148 DQVEILVLDEADRMLDMGFIHDIRRVLTK 176
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/71 (23%), Positives = 41/71 (57%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++++ ++ RQ L++SAT+ ++K LAE L + ++I + + + +A+ + Q V +
Sbjct: 171 RRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-ARRNTASDQVTQHVHFVDK 229
Query: 430 HEKENKLNVLL 462
K L+ ++
Sbjct: 230 KRKRELLSHMI 240
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE-----RGVEIVIATPGRLIDFLEK 166
A QI Q A FG + GG +E ++ RGV IV+ TPGRL+D +E+
Sbjct: 276 ALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVVGTPGRLLDSVER 335
Query: 167 GTTNLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
N +C YLV+DEADRM+DMGFE + K ++ + ++L
Sbjct: 336 KILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLPKNEKL 376
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/86 (44%), Positives = 52/86 (60%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F + VR ++GG R + +G I+ ATPGRL+D + K L++
Sbjct: 380 QIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQ 439
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLS 265
YLVLDEADRMLDMGF P+++K +S
Sbjct: 440 IKYLVLDEADRMLDMGFGPEMKKLIS 465
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+ RQTLM+SAT+P+E+++LA ++L +Y+ + +G + A ++ Q V + K K
Sbjct: 472 KEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQVGQFSKREK 530
Query: 448 LNVLLQEIGQSQ 483
L +L+ IG +
Sbjct: 531 LVEILRNIGDER 542
Score = 33.5 bits (73), Expect = 4.3
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+KA+ I+ + + +HGD+ Q+ER++ L
Sbjct: 546 FVETKKKADFIATFLCQEKISTTSIHGDREQREREQAL 583
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GGAPK EQAR + ++I TPGRL+D + G+ + + YLVLDEADRMLD GFE
Sbjct: 270 VYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQ 328
Query: 245 QIRKSLS 265
IR +S
Sbjct: 329 DIRNIIS 335
Score = 62.5 bits (145), Expect = 8e-09
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE-HEKENKLNV 456
RQT+ +SATWP+ V+ LA +L D ++I IGS +L+A+ NI QIV+I + KE L+
Sbjct: 346 RQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDN 405
Query: 457 LLQEIGQSQEPGAKTIILLKPREKLRTYQGT 549
LL++ S K +I + +++ +GT
Sbjct: 406 LLRKHLSSGGKDDKILIFVLYKKEAARVEGT 436
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QI A F S ++ ++GG Q + + +GV+I++ATPGRL+D + KG
Sbjct: 396 QIFDEARKFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDA 455
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSL 262
++VLDEADRMLDMGF P + K L
Sbjct: 456 IEFVVLDEADRMLDMGFLPDVEKVL 480
Score = 46.8 bits (106), Expect = 4e-04
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 456
+RQTLM+SAT+P+E+++LA +L +Y+ + +G + SA +I Q ++ +K KL
Sbjct: 490 ERQTLMFSATFPQEIQQLAAKFLNNYVFVTVGIVG-SACTDIEQSFFEVKKSDKRTKLKE 548
Query: 457 LLQE 468
LL E
Sbjct: 549 LLNE 552
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV K+ A+ I+ + +P +HGD+ Q+ER+E L
Sbjct: 565 FVSEKKTADFIAALLSEDNFPTTSIHGDRLQREREEAL 602
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQ+ + + + V+GG R Q L +GV+I+IATPGRL+D L T+L
Sbjct: 90 AQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSL 149
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ LVLDEADRMLDMGF P I++ + +
Sbjct: 150 NQLQMLVLDEADRMLDMGFLPDIQRIMKR 178
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/71 (26%), Positives = 41/71 (57%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q+I++++ +RQTL++SAT+ VK LA + + +++ + + +A+ + Q+V +
Sbjct: 173 QRIMKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTAD-TVKQMVYPVDK 231
Query: 430 HEKENKLNVLL 462
K L L+
Sbjct: 232 KRKSELLAYLI 242
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI Q D+ ++ V+GG ++ Q +E G++I++ATPGRL+D +E G N
Sbjct: 88 ASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINF 147
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ VLDEAD MLDMGF ++ +SK
Sbjct: 148 KALEVFVLDEADTMLDMGFFKDVQSIISK 176
Score = 38.3 bits (85), Expect = 0.15
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q II ++ RQTL++SAT P E++ LAE L D +I Q++A + +V+
Sbjct: 171 QSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKI-----QITAETVTIDLVNQSVY 225
Query: 430 H-EKENKLNVL 459
H +K NK+ +L
Sbjct: 226 HLDKSNKVPLL 236
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 76.2 bits (179), Expect = 6e-13
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGG---APKREQARDLERGVEIVIATPGRLIDFLEKGT 172
A QI Q F + V + V+GG A +Q + L G IVIATPGRL+ L+ GT
Sbjct: 83 AIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATPGRLLAQLQSGT 142
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
NL++ +LVLDEADRMLDMGF I + +S Y T+R
Sbjct: 143 ANLKQIKHLVLDEADRMLDMGFYDDIVRVIS-YLPTER 179
Score = 37.5 bits (83), Expect = 0.26
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
++I + +RQT+M+SAT P +++ LA + D QINI + + ILQ + E
Sbjct: 170 RVISYLPTERQTIMFSATMPTKMRALANKLMKDPQQINIAISKPA--EGILQQAYLVYE- 226
Query: 433 EKENKL 450
E++NKL
Sbjct: 227 EQKNKL 232
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+++ +G + + GG Q R LERG +++IATPGRL+D E+GT L
Sbjct: 90 AAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLL 149
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
LV+DEADRMLDMGF P I +
Sbjct: 150 MGVEILVIDEADRMLDMGFIPDIER 174
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 76.2 bits (179), Expect = 6e-13
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ A F + ++ ++GG R +++ +++ TPGRL DFL K +L
Sbjct: 444 AVQIQKEARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISL 503
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKY 271
YL+LDEADRMLDMGF P+I+ ++ +
Sbjct: 504 ANLKYLILDEADRMLDMGFLPEIKAIINDF 533
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
+ DR TLM+SAT+P E++ LA ++L +Y+ + IG + + +I Q + +E K +KL
Sbjct: 538 KEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVG-GTHSDITQCIMEVEESAKRDKL 596
Query: 451 NVLLQEIGQSQ 483
+L G ++
Sbjct: 597 IEILDTEGTNR 607
Score = 36.3 bits (80), Expect = 0.61
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV+TKR A+ ++ + + G+ +HGD+ QQ+R+E L
Sbjct: 611 FVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEAL 648
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A F H S +++ V+GG Q L G I++ TPGRL DF++KG +
Sbjct: 499 AIQIHREARKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDF 558
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+ +LDEADRMLDMGF I
Sbjct: 559 SNVQFFILDEADRMLDMGFGSDI 581
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
R TLM+SAT+P +V+K+A YL DY+ + G++ N ++ Q Q +K NKL +
Sbjct: 596 RVTLMFSATFPDDVQKIAGKYLHDYVFVTTGNIG-GMNPDVCQEFHEVQRQDKRNKLVEI 654
Query: 460 LQEIGQSQ 483
L+++G S+
Sbjct: 655 LRDLGNSR 662
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 76.2 bits (179), Expect = 6e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+R + GG +QA L +GVEI+IATPGR+ D LEK T L +C+Y++LDEADRM+D
Sbjct: 251 IRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMID 310
Query: 230 MGFEPQI 250
+GF+ +
Sbjct: 311 LGFQDSL 317
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 76.2 bits (179), Expect = 6e-13
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+R GG R Q +++GV IV+ATPGRL D L K NL C YL LDEADR++D
Sbjct: 293 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352
Query: 230 MGFEPQIRKSLSKY-AQTDRL*CGQLLGPKK*RNLLR 337
+GFE IR+ + AQ L + PKK +N +
Sbjct: 353 LGFEDDIREVFDHFKAQRQTLLFSATM-PKKIQNFAK 388
Score = 39.9 bits (89), Expect = 0.049
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+++ + + RQTL++SAT PK+++ A+ L + +N+G +AN +++Q V E
Sbjct: 360 REVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG-AANLDVIQEV----E 414
Query: 430 HEKENKLNVLLQEIGQSQEP 489
+ KE+ + L E Q P
Sbjct: 415 YVKEDARIIYLLECLQKTPP 434
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 75.8 bits (178), Expect = 8e-13
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 56 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 235
+ C+FGG Q + + +GV++++A PGRL+D +G+ +L R LVLDEADRMLDMG
Sbjct: 110 SACIFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMG 169
Query: 236 FEPQIRKSLSK 268
F ++K L++
Sbjct: 170 FIHDVKKVLAR 180
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/87 (39%), Positives = 55/87 (63%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q++ +D G VR + +FG ++Q +L++ V IV+ATPGR++D + +G+ L
Sbjct: 84 ALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+ YLV+DEAD+M + GF Q+ K L
Sbjct: 144 ENVKYLVIDEADKMFNKGFVEQMEKIL 170
Score = 41.5 bits (93), Expect = 0.016
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD-ICQ 426
+KI+ + ++ ++SAT +E+K + E Y+ DY INI + N QI D I +
Sbjct: 167 EKILLNLPKEKIVSLFSATIDEEIKYICEKYMLDYSVINIEENESDTNQKTRQIDDKIIK 226
Query: 427 EHEKENKLNVLLQEIGQSQEPGAKTIILLKPREKL 531
+ +E +LL+E+ S+ P II +EK+
Sbjct: 227 ANGREK--YILLKELIYSENP-KSVIIFCNTKEKV 258
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
VR+ C++GGAP +Q L++ +IV+ATPGRL+D +++ T L + +VLDEADRMLD
Sbjct: 110 VRSVCLYGGAPIEKQITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLD 169
Query: 230 MGFEPQIRKSLSK 268
MGF + + L +
Sbjct: 170 MGFIHDVTRILDQ 182
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 75.8 bits (178), Expect = 8e-13
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI G + +R ++GG +Q R L GV++V+A PGRL+D + +GT ++
Sbjct: 83 ACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDV 142
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
L++DEADRM DMGF+P I+ L Q
Sbjct: 143 CGVETLIIDEADRMFDMGFQPDIQSILKCLVQ 174
Score = 32.3 bits (70), Expect = 9.9
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG--SLQLSANHNILQIVDIC 423
Q I++ + QTL++SAT P EV+KL + + + + +G S S +H++ +
Sbjct: 166 QSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSSVSHSVYPV---- 221
Query: 424 QEHEKENKLNVLLQEI 471
+ H+K L +L+ +
Sbjct: 222 KSHQKTPLLLEILKTV 237
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 75.8 bits (178), Expect = 8e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +2
Query: 14 QQVAADF---GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
+QV ADF G++ ++ CV+GG P REQ L G ++VI TPGR+ D LE+ T +
Sbjct: 176 KQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMD 235
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGP 313
+ + VLDEAD ML+MGF + L L L P
Sbjct: 236 KLKFRVLDEADEMLNMGFVDDVELILKSSGDVQTLLFSATLPP 278
Score = 32.3 bits (70), Expect = 9.9
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYL-GDYIQIN-IGSLQLSANHNILQIVDICQEHEKENKL 450
D QTL++SAT P VK +A+ +L DY ++ +G + A+ + ++ CQ ++ +
Sbjct: 266 DVQTLLFSATLPPWVKDIAKRFLKPDYATVDLVGDQKQKASGAVQHMLLPCQWSDRVD-- 323
Query: 451 NVLLQEIGQSQEPGAKTIIL 510
L+ ++ +S+ PG +I+
Sbjct: 324 --LVCDVIRSKAPGGGRVIV 341
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI F H + ++ +GG + Q + + G +++ATPGRL+DF+++G
Sbjct: 262 AIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTF 321
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ ++VLDEADRMLDMGF P I K
Sbjct: 322 ENVNFVVLDEADRMLDMGFLPSIEK 346
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/64 (34%), Positives = 41/64 (64%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
+ RQTLM+SAT+P E+++LA +L +YI + +G + A ++ Q + + ++ +K KL
Sbjct: 356 KQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL 414
Query: 451 NVLL 462
+L
Sbjct: 415 EEIL 418
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETKR A+ ++ + +P +HGD+ Q+ER+ L
Sbjct: 429 FVETKRNADYLASLMSETQFPTTSIHGDRLQREREMAL 466
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 75.8 bits (178), Expect = 8e-13
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +2
Query: 11 IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
+QQ A F S VR +GGAP+ QAR L G ++++A PGRL DFL+ G
Sbjct: 200 VQQTAKVFHQLSSGKVRVCEAYGGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFD 259
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSKYA 274
++LV DEADR+LDMGF+ Q+ L ++
Sbjct: 260 EVSFLVFDEADRLLDMGFKVQLDDILGYFS 289
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 283 QTLMWSATWPKEVKKLAEDYLGD---YIQINIGSLQLSANHNILQIVDICQEHEKENKLN 453
QT+MWSATWP V++LA++YL I+ L N NI Q + E+ K
Sbjct: 295 QTMMWSATWPPVVEQLAQEYLSQNRYVIRSGTAGTGLQVNENIKQHIFFADAPEERVKTL 354
Query: 454 VLLQEIGQSQEPGAKTIILLK 516
V L + G+ E AK +I ++
Sbjct: 355 VSLIKEGKIDENTAKMMIFVE 375
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 75.8 bits (178), Expect = 8e-13
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V GG P Q L G ++V+ATPGRL+D ++G L + TYLV+DEADRML MG E
Sbjct: 147 VCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEE 206
Query: 245 QIRKSLSKYAQTDR 286
Q+RK + T R
Sbjct: 207 QLRKIVGLATGTSR 220
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
RQTL+WSAT P+ +++LA + + I I +G L A ++ Q V ++K KL
Sbjct: 222 RQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIA-PSVQQNVVFLYHYQKPQKL 277
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 75.8 bits (178), Expect = 8e-13
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 11 IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
++Q A Y +R+ GG R Q ++RGV IV+ATPGRL D L K +L
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301
Query: 185 RCTYLVLDEADRMLDMGFEPQIRK 256
C YL LDEADR++D+GFE IR+
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIRE 325
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/80 (26%), Positives = 46/80 (57%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+++ + + RQTL++SAT P +++ A L + +N+G +AN +++Q V+ ++
Sbjct: 324 REVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG-AANLDVIQEVEYVKQ 382
Query: 430 HEKENKLNVLLQEIGQSQEP 489
E K+ LL+ + ++ P
Sbjct: 383 ---EAKIVYLLECLQKTSPP 399
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPK---REQARDLERGVEIVIATPGRLIDFLEKGT 172
AQQI Q F + V ++GG +Q R + G +IVIATPGRLI L G+
Sbjct: 85 AQQIDQQVEGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPGRLISHLNLGS 144
Query: 173 TNLQRCTYLVLDEADRMLDMGFEP---QIRKSLSKYAQT 280
+L +Y VLDEADRMLDMGF QI K L QT
Sbjct: 145 ADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQT 183
Score = 41.9 bits (94), Expect = 0.012
Identities = 31/99 (31%), Positives = 49/99 (49%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
+I +Q+ QT+M+SAT P +++KLA L D I++ I + +I+Q IC E
Sbjct: 172 QIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIEVEIAISR--PPESIMQSAYICHEA 229
Query: 433 EKENKLNVLLQEIGQSQEPGAKTIILLKPREKLRTYQGT 549
+K L L + Q +TII + K+R T
Sbjct: 230 QKLPILRKLFE-----QSAPKRTIIFASAKLKVRELTST 263
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/88 (44%), Positives = 51/88 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + G VR ++GGA R Q ++RG IV+ATPGRL+DFLE+ L
Sbjct: 126 ALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKL 185
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
Q +VLDEAD ML MGF+ + LS
Sbjct: 186 QSVKTVVLDEADEMLSMGFKEALETILS 213
Score = 36.7 bits (81), Expect = 0.46
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F +TK + ++ + + G+PA +HGDK+QQER+ L
Sbjct: 297 FCQTKMEVAELADVLTQRGFPADSLHGDKSQQEREATL 334
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
Q++ DFG + VR+T + GG +Q DL G +IVIAT GRL+DF+++ L
Sbjct: 85 QVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDS 144
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
L+LDE DRMLDMGF +++
Sbjct: 145 VEVLILDEVDRMLDMGFINDVKR 167
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 AQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A Q Q DF T+ + V+GG+P Q L+RG ++V+ TPGR+ID +EKG +
Sbjct: 126 AMQSAQAIEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALD 185
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
L LVLDEAD ML MGF + ++++ A DRL
Sbjct: 186 LSHVRMLVLDEADEMLRMGFAEDV-ETIASSAPDDRL 221
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + ++G +++T VFGG Q L RG +I+IATPGR++D +
Sbjct: 90 AAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRF 149
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ LVLDEADRMLDMGF I+K L+
Sbjct: 150 DKLEVLVLDEADRMLDMGFIHDIKKILA 177
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A +++++AA + + ++ ++GG P R QA L +G I+I TPGR+ D L KGT L
Sbjct: 88 AMELRKIAA---YKANLKILTLYGGVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ LVLDEADRMLDMGF +I K
Sbjct: 145 ESIKTLVLDEADRMLDMGFYEEIIK 169
Score = 34.3 bits (75), Expect = 2.4
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KI + +QTL++SAT+P +++ LA+ L D + I + ++Q + N L + +
Sbjct: 169 KIGSNMPKQKQTLLFSATFPPKIESLAKALLKDPLTIKVDTVQEAMKINEL----VYETP 224
Query: 433 EKENKLNVLL 462
+K LN L+
Sbjct: 225 DKFKTLNALI 234
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 11 IQQVAADFGHTSY---VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
+QQ A SY + +GG P Q L+ G +I++ATPGRL+DF+++G
Sbjct: 233 VQQTAKASWMLSYGTSILTRVAYGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVET 292
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
++V DE DRMLDMGFEPQIR L
Sbjct: 293 TYVRFVVFDECDRMLDMGFEPQIRDIL 319
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +1
Query: 244 TNQKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQIVD 417
+N I QI +RQTL++SAT+PKE+K LA ++L + I +G + S+N N+ Q V
Sbjct: 333 SNPDITHQI--ERQTLLFSATFPKEIKNLAMEFLRQDRLVSITVGQIG-SSNPNLAQRVV 389
Query: 418 ICQEHEKENKLNVLLQEI-GQSQE 486
+ + +KL +L + I GQ+ +
Sbjct: 390 LVE--RSNDKLRLLTEYITGQNAD 411
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 75.4 bits (177), Expect = 1e-12
Identities = 29/64 (45%), Positives = 50/64 (78%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GG+P+ Q +++++GV+IV+ PGR++DF+E+G N+ + + L LDEAD+ML+MGF+
Sbjct: 174 VYGGSPEYPQIQEIKKGVDIVVGCPGRVLDFIERGILNVSKISVLTLDEADKMLEMGFKE 233
Query: 245 QIRK 256
+ K
Sbjct: 234 TVDK 237
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/73 (50%), Positives = 46/73 (63%)
Frame = +2
Query: 59 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 238
T ++GG Q R L GV+IV+ATPGR DFLEKGT + R LDEAD MLD+GF
Sbjct: 190 TALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDEADHMLDIGF 249
Query: 239 EPQIRKSLSKYAQ 277
+ I LS+ A+
Sbjct: 250 KDDIELLLSQVAE 262
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
++Q++ A + +R V+GG+ Q L+RGVEI++ TPGR+ID L
Sbjct: 755 SKQVKSEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKV 814
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
TNL R +++VLDEADR+LD+GFE QI L+
Sbjct: 815 TNLNRVSFVVLDEADRLLDLGFESQIHNILN 845
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I+ R D+QT M SAT+P ++ LA+ L I+I +G + N+NI Q V++ + +
Sbjct: 843 ILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVGE-KGKTNNNIYQFVEVLEGGK 901
Query: 436 KENKLNVLLQE 468
K +L LL E
Sbjct: 902 KIYRLLKLLGE 912
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 14 QQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
+QV +F ++ +T C++GG P +Q R L+ GV++ + TPGR+ID +++G NL
Sbjct: 192 RQVEKEFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEV 251
Query: 191 TYLVLDEADRMLDMGFEPQIRKSLSK 268
++VLDEAD+ML +GF + L K
Sbjct: 252 QFVVLDEADQMLQVGFAEDVEIILEK 277
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/89 (41%), Positives = 49/89 (55%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI V HT + T V+GG Q RDL+ G +IV+A PGRL D L + L
Sbjct: 122 ANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTL 181
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+V+DEAD M DMGF P +++ L +
Sbjct: 182 SSVEVVVIDEADEMADMGFLPPVKRLLEQ 210
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/89 (41%), Positives = 49/89 (55%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI V HT + T V+GG Q RDL+ G +IV+A PGRL D L + L
Sbjct: 138 ANQINDVLMPLAHTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTL 197
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+V+DEAD M DMGF P +++ L +
Sbjct: 198 SSVEVVVIDEADEMADMGFLPPVKRLLEQ 226
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
F TK +A+ +++N+ + G PA +HG+ Q +RD L +
Sbjct: 299 FTRTKFQAKKLAKNLTQNGIPAAELHGNLNQNQRDRNLAA 338
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + +G + +++ +FGG ++ Q L G++I++ATPGRL+D + +G +L
Sbjct: 84 AIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+ VLDEADRMLDMGF I++ L
Sbjct: 144 SSLDFFVLDEADRMLDMGFIHDIKRIL 170
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GGAP +Q + L+R +V+ATPGRLID L +G +L YLVLDEAD M++MGF+
Sbjct: 4 VYGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKA 63
Query: 245 QIRKSL 262
+I + L
Sbjct: 64 EIDEIL 69
Score = 34.3 bits (75), Expect = 2.4
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQE 429
+I++ +P L+++AT PK+VK L E+YL D +I I +L N I + + +
Sbjct: 67 EILKSCKPAITKLLFTATMPKDVKLLIEEYLVADASEIRINKEEL-VNEKIQHYLLMFEN 125
Query: 430 HEKENKLNVLLQE 468
K + L L E
Sbjct: 126 GMKLDYLKAFLNE 138
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI Q + +R+T +FGG +Q DL G EIV+AT GRL+D +++ +L
Sbjct: 118 ADQIDQNVQSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISL 177
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ +VLDEADRMLDMGF IRK
Sbjct: 178 NKVEIVVLDEADRMLDMGFIDDIRK 202
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/78 (28%), Positives = 45/78 (57%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI++ + RQTL++SAT+ ++KLA+D++ + + + Q + N N+ Q +
Sbjct: 201 RKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QNTTNANVEQHIIAVDT 259
Query: 430 HEKENKLNVLLQEIGQSQ 483
+K N L L+ ++ +Q
Sbjct: 260 IQKRNLLERLIVDLHMNQ 277
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTT 175
A QI++ G + +R+ C+ GG EQARDL R ++IATPGRLID LE KG
Sbjct: 179 AFQIKETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKG-F 237
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL 289
+L++ YLV+DE DRM+D+ + I + L + R+
Sbjct: 238 SLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRI 275
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/77 (46%), Positives = 46/77 (59%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 217
H VR V+GG P QA L RG ++V+ TPGR++D + +GT L VLDEAD
Sbjct: 99 HLRGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEAD 158
Query: 218 RMLDMGFEPQIRKSLSK 268
MLDMGF I + LS+
Sbjct: 159 EMLDMGFREDIERILSE 175
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 217
H VR V+GG+ +EQAR++ RG +IV+ATPGR+ D + + ++ + +Y VLDEAD
Sbjct: 96 HIKGVRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEAD 155
Query: 218 RMLDMGFEPQIRKSLS 265
ML+MGF I L+
Sbjct: 156 EMLNMGFYEDITNILA 171
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 372
I+ D+ T ++SAT P+EV ++A++++ D ++I +G
Sbjct: 169 ILADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVG 207
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
F TKR + ++ + G+ A +HGD +Q +RD V+ S
Sbjct: 247 FCRTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKS 286
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/87 (42%), Positives = 50/87 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI F + VR GG R L GV +++ATPGRL+ F+ G +L
Sbjct: 299 AQQILFEGMKFATGTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLLHFIRSGLISL 358
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
C ++VLDEADR+LD GFE ++R+ L
Sbjct: 359 SMCNFIVLDEADRLLDEGFEGEMREFL 385
>UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 39 - Arabidopsis thaliana (Mouse-ear cress)
Length = 621
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
++Q+ +VA H + R+ V GG+ R Q L +++V+ TPGR++ +E+G
Sbjct: 202 SEQVYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVY 261
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
YLVLDEAD M D GF P+IRK L+ Q
Sbjct: 262 GDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQ 293
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +2
Query: 62 CVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 235
C+FGG+ K EQ L + GV+I+ ATPGRL DFL +G+ +L ++ VLDEADRMLD G
Sbjct: 290 CIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRG 349
Query: 236 FEPQIRKSLS 265
F I+ LS
Sbjct: 350 FSEDIKLILS 359
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI-------------GSLQLSANHNILQI 411
+ RQTLM++ATWP +++KLAE Y+ + Q+ I G+++L AN I Q
Sbjct: 364 KEQRQTLMFTATWPLDIQKLAESYMINPAQVTIGHRTRAGGDGEGNGNIELQANSRIEQK 423
Query: 412 VDICQEHEKENKLNVLLQEIGQ-SQEPGAKTIILLKPREKLRTYQ 543
V++ KE +L LL+E + SQ+ + L +E +R Q
Sbjct: 424 VEVVDPRGKEFRLYELLKEAQKGSQKDDRILVFCLYKKEAVRVEQ 468
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/88 (37%), Positives = 54/88 (61%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + +G +R +FGG + Q R LE+G++I++ATPGRL+D + +G +L
Sbjct: 88 ATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDL 147
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ VLDE D+MLDMG +++ ++
Sbjct: 148 SHVEHFVLDETDQMLDMGMLHDVKRIIT 175
Score = 37.1 bits (82), Expect = 0.35
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 471 WTKSRTWCENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
W K+ + F TK A+ I + + + G+ AV +HG+K+Q R++ L
Sbjct: 239 WLKNNEYDSVLVFSRTKHGADKIVKELNKKGFTAVAIHGNKSQANREQAL 288
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/92 (42%), Positives = 52/92 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G R V+GGAP Q R L +GV++V+ATPGR +D + +GT L
Sbjct: 141 AVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRL 200
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
+VLDEAD MLDMGF I L + Q
Sbjct: 201 DGLHTVVLDEADEMLDMGFAEDIDAILEQAPQ 232
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 372
I+EQ RQT+++SAT P + ++A +L D ++I IG
Sbjct: 226 ILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQIG 264
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GG Q R L+R V++V+ TPGR+ID L +GT ++ + YLV+DEAD MLDMGF
Sbjct: 105 VYGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIE 164
Query: 245 QIRKSLSK 268
+ LSK
Sbjct: 165 DVEMILSK 172
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGT---T 175
QI F + S + C +GG P +Q ++RG + I+ AT GRLID L+ +
Sbjct: 597 QIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVL 656
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
+ +R TY+VLDEADRM DMGFEPQ+ K L+
Sbjct: 657 SFRRITYVVLDEADRMFDMGFEPQVMKILA 686
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEH 432
KI+ IRPDRQT+++SAT+PK + LA L ++ IG A I + +
Sbjct: 683 KILASIRPDRQTILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSY 742
Query: 433 EKENKLNVLLQEIGQ--SQEPGAKTIILLKPRE 525
EK K+ LL +GQ S + A+ +I + +E
Sbjct: 743 EK--KIAKLLHHLGQTFSDDENAQVLIFTERQE 773
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/88 (45%), Positives = 53/88 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q +VA+ G S +++T V+GGA Q +L G +IVI TPGR++D + L
Sbjct: 78 ALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELP-GSDIVIGTPGRILDLYNQKYLKL 136
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
YLVLDEAD MLDMGF I+K +S
Sbjct: 137 DHVKYLVLDEADLMLDMGFIDDIKKIIS 164
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 217
H+ +R+ + GG + Q +DLE I++ATPGRLID ++ G+ ++ + VLDEAD
Sbjct: 96 HSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEAD 155
Query: 218 RMLDMGFEPQIRKSLSK 268
RMLDMGF IR L K
Sbjct: 156 RMLDMGFIQDIRWLLHK 172
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
++ + + +QTL++SAT EV +LA +L + ++I I ++ +IV + +E +
Sbjct: 169 LLHKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEK 228
Query: 436 KENKLNVLLQEIGQSQ 483
N+++ + Q
Sbjct: 229 IPYMTNLIINSKEEGQ 244
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 AQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A Q+ A+ +G H +R + GG +Q L + EI++ATPGRL+D LE+G +
Sbjct: 150 AMQVTTAASTYGKHLRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLLDHLERGRID 209
Query: 179 LQRCTYLVLDEADRMLDMGF 238
L LVLDEADRMLDMGF
Sbjct: 210 LSELKMLVLDEADRMLDMGF 229
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q++ A + +R+ VFGG R Q + L+ GV+I++ATPGRL+D + +
Sbjct: 109 AAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRF 168
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
LVLDEADRMLDMGF I+K
Sbjct: 169 DNLKVLVLDEADRMLDMGFIRDIKK 193
Score = 39.9 bits (89), Expect = 0.049
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+K+IE + +RQ +M+SAT+ +KKLA L D ++I S+Q A I +V C
Sbjct: 192 KKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIK-ASVQNQAAPTIEHLVHPCDM 250
Query: 430 HEKENKLNVLLQ 465
K + L L++
Sbjct: 251 ARKVDLLCHLIK 262
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 73.7 bits (173), Expect = 3e-12
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + + S +R+T VFGG Q L +GV+I++ATPGRLID +G +L
Sbjct: 88 AIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLIDLQMQGNIDL 147
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
+ VLDEAD MLDMGF I+K
Sbjct: 148 SQLEIFVLDEADLMLDMGFINDIKK 172
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
Q+ + G V+ V+GG Q L RGV +++ATPGRLID +E+GT +L
Sbjct: 86 QVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGG 145
Query: 188 CTYLVLDEADRMLDMGFEPQIRKSLS 265
+ +VLDEAD ML+MGF I + LS
Sbjct: 146 ISTVVLDEADEMLNMGFIDDIERILS 171
Score = 35.9 bits (79), Expect = 0.80
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR+ + + R + R G+ A +HGD +Q +R+ V+
Sbjct: 245 FCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVM 282
>UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=3; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 39 - Oryza sativa subsp. japonica (Rice)
Length = 625
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
+Q+ +VA H + R+T V GG+ R Q L V++V+ TPGR++D ++ G
Sbjct: 201 EQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYG 260
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLS 265
YLVLDEAD M D GF P IRK L+
Sbjct: 261 DIKYLVLDEADTMFDQGFGPDIRKFLA 287
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +2
Query: 17 QVAADFG----HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QVA FG + S + ++GG+ Q L RG ++V+ TPGR+ID LE+ T +L
Sbjct: 96 QVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLS 155
Query: 185 RCTYLVLDEADRMLDMGFEPQIRKSLSK 268
R +LVLDEAD ML MGF + + LS+
Sbjct: 156 RVDFLVLDEADEMLTMGFADDVERILSE 183
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 73.3 bits (172), Expect = 4e-12
Identities = 36/89 (40%), Positives = 51/89 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+ +R C GG P + Q +L G EIV+A PGRL D L + L
Sbjct: 265 ALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLNQSYLVL 324
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+C ++VLDEAD+M+D+G + Q+R S+
Sbjct: 325 GQCYFVVLDEADKMIDLGLDVQVRYIFSE 353
Score = 36.7 bits (81), Expect = 0.46
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
R TLM+SAT P ++K+ +YL I I+IG + N+ Q + +++ K+ KL +
Sbjct: 380 RTTLMYSATMPSTLEKITNEYLRRPITISIGKTG-NVAENVKQNILWVEDNMKKRKLIQV 438
Query: 460 LQE------IGQSQEPGAKTIILLKPREKL 531
++ + +Q+ + I LL +EK+
Sbjct: 439 IKSSSPPTIVFVNQQKTVEEICLLLEKEKI 468
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 73.3 bits (172), Expect = 4e-12
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + G + V+ ++GG Q R L GV++VI TPGR++D L + T +L
Sbjct: 87 AIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDL 146
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+ +VLDEAD MLDMGF I K L
Sbjct: 147 SQVRMVVLDEADEMLDMGFIEDIEKIL 173
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLS 387
+KI++ +RQTL++SAT P E+++LA Y+ D I I++ QL+
Sbjct: 170 EKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLT 215
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 73.3 bits (172), Expect = 4e-12
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 14 QQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
+QVA +F + +T V+GGA Q L RGV++V+ TPGRLID LE+G +L
Sbjct: 90 KQVAEEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAI 149
Query: 191 TYLVLDEADRMLDMGFEPQIRKSLSK 268
Y VLDEAD ML +GF I L +
Sbjct: 150 QYAVLDEADEMLSVGFADAIETILQQ 175
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 73.3 bits (172), Expect = 4e-12
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI++ + + +R V GG P + Q L RGV+++IATPGRL D + +G+ +L
Sbjct: 98 ALQIERALDEPALSVGLRVANVVGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSL 157
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
T L LDEAD M D+GF PQ+ L K
Sbjct: 158 DDVTVLALDEADHMADLGFMPQVTTILDK 186
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ G + +R + V GG P Q L+RG++++IATPGRL+D +++ +L
Sbjct: 232 AMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSL 291
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
VLDEAD M D+GF P +R L
Sbjct: 292 AEVDVAVLDEADHMADLGFLPNVRAIL 318
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 73.3 bits (172), Expect = 4e-12
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+++ + G ++ V+G AP Q ++L++ +V+ TPGR+ID +EKGT +
Sbjct: 85 AIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGRIIDHMEKGTFDT 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR---KSLSK 268
+ YLV+DEAD M +MGF QI K LSK
Sbjct: 145 SQIKYLVIDEADEMFNMGFVDQIETIIKDLSK 176
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI Q A D+ + + GG Q R+L+R +IV+ATPGRL+D + + L
Sbjct: 85 ATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTL 144
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+ +++DEADRMLDMGF P I
Sbjct: 145 ANTSLVIIDEADRMLDMGFLPDI 167
Score = 39.1 bits (87), Expect = 0.086
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR AE++S + G+P+ +HGDK+Q R+ VL
Sbjct: 251 FTRTKRSAEDLSIALNDAGYPSDALHGDKSQPVRNRVL 288
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 AQQIQQVAADFGH-TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
AQQ+ + +G +R +FGGA R+Q + L G IV+ATPGRL+D +E+ + +
Sbjct: 90 AQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSID 149
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNL 331
L +VLDEAD ML MGF + L+K + ++ PK+ R++
Sbjct: 150 LTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKVALFSATMPKRVRDI 200
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 73.3 bits (172), Expect = 4e-12
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A QIQ F C+ G E A L G EI++ATPGRL+D LE+
Sbjct: 346 ATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLV 405
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L +C+Y+VLDEADRM+D GFE I K L+
Sbjct: 406 LSQCSYVVLDEADRMVDGGFEDSIHKILA 434
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQT+M+SAT P V+++A++YL + IG++ + + Q + + E E+ NKL +
Sbjct: 465 RQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAM 524
Query: 460 LQEIG 474
L G
Sbjct: 525 LNTYG 529
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
FV TK + ++++++ + AV +HG+KTQ +R+ L S
Sbjct: 537 FVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQS 576
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/91 (42%), Positives = 50/91 (54%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ +V G + C+ GG K EQ L I++AT GRL D + G L
Sbjct: 102 AMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENPNILVATTGRLFDLTQSGL-RL 160
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYA 274
R T LVLDEADR+LDMGF PQ++ S+ A
Sbjct: 161 NRVTTLVLDEADRLLDMGFWPQVQALASQTA 191
Score = 37.5 bits (83), Expect = 0.26
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 477 KSRTWCENNNFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
K W + F+ K A+++++ + + G A +HGDK+Q ER+ L
Sbjct: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAAL 301
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +2
Query: 17 QVAADFG-HTSYVRNT--CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QVA +F + Y+R T + GG EQ L RGV+++IATPGRL+D +G L +
Sbjct: 377 QVAENFKLYGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQ 436
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
+ LV+DEADRMLDMGF P I K
Sbjct: 437 TSTLVIDEADRMLDMGFIPDIEK 459
Score = 41.1 bits (92), Expect = 0.021
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ + RQTL +SAT E+++LA+ +L ++I + S Q S I + + I E
Sbjct: 458 EKIVALLPAHRQTLFFSATMAPEIRRLADAFLRHPVEITV-SRQSSVATTIEEALVIVPE 516
Query: 430 HEKENKLNVLLQ 465
EK L LL+
Sbjct: 517 DEKRRTLKKLLR 528
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/89 (40%), Positives = 50/89 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQ+ + + +R V GG QA L G E+V+ATPGRL D +++G L
Sbjct: 153 AQQVTDALTPYARSVKLRLATVVGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRL 212
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
+ + VLDEAD+M DMGF PQ+ L +
Sbjct: 213 NQVSVTVLDEADQMADMGFMPQVTALLDQ 241
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/87 (44%), Positives = 48/87 (55%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + D + + VFGG R Q RGV+++I TPGRL+D L
Sbjct: 83 AAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKL 142
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
+LVLDEADRMLDMGF P IR+ L
Sbjct: 143 AGLEHLVLDEADRMLDMGFLPDIRRIL 169
Score = 32.3 bits (70), Expect = 9.9
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++I++ I RQTL +SAT P + LA + L + +NI + A + + QE
Sbjct: 166 RRILKHIPARRQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQE 225
>UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_151, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 635
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
++Q+ +VA H + R+T V GG R Q L +++V+ TPGR++ +E+G
Sbjct: 209 SEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMVVGTPGRVLQHIEEGNMVY 268
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
YLVLDEAD M D GF P IRK L+
Sbjct: 269 GEIKYLVLDEADTMFDRGFGPDIRKFLA 296
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +2
Query: 8 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTN 178
Q++ A+ + ++ V+GG+ Q L++GVEI++ TPGR+ID L TN
Sbjct: 657 QVKNEASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTN 716
Query: 179 LQRCTYLVLDEADRMLDMGFEPQIRKSLS 265
L R +++VLDEADR+LD+GFE QI L+
Sbjct: 717 LNRASFIVLDEADRLLDLGFESQIHSILN 745
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
I+ R D+QT M SAT+P ++ LA+ L I+I +G + N+NI Q V++ +E +
Sbjct: 743 ILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVGE-KGKTNNNIYQFVEVLEEKK 801
Query: 436 KENKLNVLLQE 468
K +L LL E
Sbjct: 802 KLFRLLKLLGE 812
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 17 QVAADFG-HTSYVRNT--CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 187
QVA +F + +V+ T + GG +EQ + +++GV+++IATPGRL+D E+G L
Sbjct: 97 QVAENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILND 156
Query: 188 CTYLVLDEADRMLDMGFEPQIRK 256
+V+DEADRMLDMGF P I +
Sbjct: 157 VKVMVVDEADRMLDMGFIPDIER 179
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 72.5 bits (170), Expect = 8e-12
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +2
Query: 14 QQVAAD-FGHTSYV---RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
QQVA D F + Y+ V+GG EQ + LE I++ATPGRL+D + + NL
Sbjct: 84 QQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETPKHILVATPGRLLDLIARKAVNL 143
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
YL+LDEAD ML+MGF P I K + T R
Sbjct: 144 SNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTAR 178
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/87 (43%), Positives = 49/87 (56%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+QQ + R GG R +A+ LERG IV+ TPGRL D L +G NL
Sbjct: 130 AMQVQQELLWLYGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNL 189
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSL 262
R +VLDEAD MLD+GF ++ + L
Sbjct: 190 SRLRAVVLDEADEMLDLGFRDELEEIL 216
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G + ++GG +Q R L+RGV++V+ATPGR +D L++ T L
Sbjct: 120 AMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKL 179
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
++ +VLDEAD MLDMGF + LS
Sbjct: 180 EQVRVVVLDEADEMLDMGFAEDLEAILS 207
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GGA EQARD++RG +I++ATPGR+ D + + ++ + Y +LDEAD ML+MGF
Sbjct: 106 VYGGASITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYE 165
Query: 245 QIRKSLS 265
I LS
Sbjct: 166 DIVNILS 172
Score = 33.1 bits (72), Expect = 5.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKR + ++ + G+ A +HGD +Q +RD V+
Sbjct: 248 FCRTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVM 285
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQ +V + G VR +GGAP+ QAR L G + ++A PGRL DFL+ G +++
Sbjct: 176 QQTTKVFQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGRLKDFLDGGDVSIR 234
Query: 185 RCTYLVLDEADRMLDMGFE 241
++LV DEADR+LDMGF+
Sbjct: 235 NLSFLVFDEADRLLDMGFQ 253
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 283 QTLMWSATWPKEVKKLAEDYLGD---YIQINIGSLQLSANHNILQIVDICQEH-EKENKL 450
QT+MWSATWP+ V+ +A YL D I+ L N I Q + C+ E+ KL
Sbjct: 270 QTMMWSATWPESVQAMARKYLSDDRVLIRAGTAGAGLQVNERIKQELIFCRTFTERIEKL 329
Query: 451 NVLLQEIGQSQEPGAKTIILLK 516
L+++ G + K II ++
Sbjct: 330 GSLVED-GTIDDNKDKLIIFVE 350
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q +V DF + +R + GG +Q DL R +I+IATPGRL+ L + +L
Sbjct: 313 AIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIATPGRLMHHLLETGMSL 372
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
+ Y+V DEADR+ +MGF Q+ + LSK ++
Sbjct: 373 SKVQYIVFDEADRLFEMGFNEQLTEILSKLSE 404
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
V+GG P Q + L RGV+I+I TPGR+ID +++ T L + +VLDEAD+MLDMGF
Sbjct: 107 VYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFRE 166
Query: 245 QIRKSLS 265
I + LS
Sbjct: 167 DIEEILS 173
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 229
+R+ ++GGA Q + L +G +IV+ATPGRL+D + K +L+ LVLDEADRMLD
Sbjct: 104 IRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLD 163
Query: 230 MGFEPQI 250
+GF ++
Sbjct: 164 LGFADEL 170
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/38 (39%), Positives = 29/38 (76%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINI 369
I++Q + QTL++SAT+P +VK+L E+ L + ++I++
Sbjct: 173 ILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEISV 210
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A Q+ + +G + + + GG +Q L +GV+++IATPGRLID ++G L
Sbjct: 307 ALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLL 366
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
LV+DEADRMLDMGF P + + +S
Sbjct: 367 TDTRILVIDEADRMLDMGFIPDVERIVS 394
Score = 33.1 bits (72), Expect = 5.7
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++I+ + +RQTL +SAT E+++LA+ +L + +I + S I + + E
Sbjct: 390 ERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITVAK-PASVATTITSGLALVGE 448
Query: 430 HEKENKLNVLLQE 468
+K L LL++
Sbjct: 449 MDKRKALRHLLRQ 461
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/92 (36%), Positives = 55/92 (59%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQI + + + T + GG P+ +Q L RGV+++IATPGR+ D +E+G +L
Sbjct: 461 AQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVDVIIATPGRVEDLIEQGRLDL 520
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQ 277
+ VLDEAD M D+GF +++ L + ++
Sbjct: 521 SQVKVTVLDEADHMCDLGFLEPVQRILRETSE 552
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,009,200
Number of Sequences: 1657284
Number of extensions: 12783505
Number of successful extensions: 38020
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 35630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37672
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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