Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0414
(630 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 72 3e-15
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 24 0.91
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.1
EF532798-1|ABQ08060.1| 50|Tribolium castaneum acetylcholineste... 22 3.7
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 6.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 8.5
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 8.5
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 8.5
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 8.5
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 72.1 bits (169), Expect = 3e-15
Identities = 36/88 (40%), Positives = 48/88 (54%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI F + S V+ ++GG Q + G I++ATPGRL DF+ +G +
Sbjct: 248 AIQIADQGKKFAYNSTVKVAVIYGGTSTNHQRGRILGGCHILVATPGRLKDFVNRGNVSF 307
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLS 265
Y VLDEADRMLDMGF + + LS
Sbjct: 308 NSLKYFVLDEADRMLDMGFLGDVEEMLS 335
Score = 42.3 bits (95), Expect = 3e-06
Identities = 28/82 (34%), Positives = 51/82 (62%)
Frame = +1
Query: 277 DRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNV 456
+RQTLM+SAT+P+EV++LA +L +YI I +G + SA ++ Q + +K +KL
Sbjct: 344 ERQTLMFSATFPEEVQQLAGKFLLNYIFIAVGIVG-SACTDVEQKFFQVSKFDKRSKLVS 402
Query: 457 LLQEIGQSQEPGAKTIILLKPR 522
+L+ + P +T+I ++ +
Sbjct: 403 ILE-----KAPNERTLIFVETK 419
Score = 33.1 bits (72), Expect = 0.002
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLV 623
FVETKR A+ ++ + + +HGD+ Q ER++ L+
Sbjct: 415 FVETKRNADFLATFLSEQNIQSTSIHGDRYQSEREKALL 453
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 24.2 bits (50), Expect = 0.91
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 592 LSPCMQTAGQPYLLMFLDMFSAFLLVSTKLLFSHQVLDFVQFLAIIHLIYFLF 434
LS + + + L L MF+ L+ T+++F VL + + +HL+Y F
Sbjct: 229 LSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISF 281
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.1
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -3
Query: 556 LLMFLDMFSAFLLVSTKLLFSHQVLDFVQ---FLAIIHLIYFLFHVLDKYLQFEEC 398
LL + AF++ + LLF + FV FL I+ Y F + +L F C
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLC 165
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -1
Query: 603 LVEFYRHACKQLASHISLCSLICSQLFSWFQQNYC 499
L Y C + ++ L L+CS F+ YC
Sbjct: 53 LRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYC 87
>EF532798-1|ABQ08060.1| 50|Tribolium castaneum
acetylcholinesterase protein.
Length = 50
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 582 HGDKTQQERDEVLVSV 629
HGDK QER +V V V
Sbjct: 29 HGDKPPQERPKVPVLV 44
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.4 bits (43), Expect = 6.4
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -1
Query: 624 IRELHLFLVEFYRHACKQLASHI 556
IR+++ +E Y AC + +H+
Sbjct: 154 IRQIYHQELEKYEQACNEFTTHV 176
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 549 IRRYGWPAVCMHGDKTQQERD 611
+RRYGW A K Q RD
Sbjct: 590 MRRYGWTANMERIMKAQALRD 610
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVC 578
FV+++ I N+ W AVC
Sbjct: 222 FVKSRPSPATIISNVTVISWQAVC 245
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVC 578
FV+++ I N+ W AVC
Sbjct: 222 FVKSRPSPATIISNVTVISWQAVC 245
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVC 578
FV+++ I N+ W AVC
Sbjct: 542 FVKSRPSPATIISNVTVISWQAVC 565
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,952
Number of Sequences: 336
Number of extensions: 3519
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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