Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0414
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 130 1e-30
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 7e-19
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 77 1e-14
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 63 2e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 58 4e-09
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 56 2e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 56 2e-08
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 53 2e-07
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 52 5e-07
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 52 5e-07
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 51 9e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 43 2e-04
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 42 3e-04
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 42 3e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 41 7e-04
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 41 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 41 0.001
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 38 0.007
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.021
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 32 0.33
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 32 0.44
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 30 1.8
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 29 2.4
SB_17200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_4570| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 130 bits (313), Expect = 1e-30
Identities = 61/84 (72%), Positives = 69/84 (82%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQ+Q+VA G +R+TC++GGAPK Q R+LERGVEI IATPGRLID LE TNL
Sbjct: 145 AQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNL 204
Query: 182 QRCTYLVLDEADRMLDMGFEPQIR 253
+RCTYLVLDEADRMLDMGFEPQIR
Sbjct: 205 RRCTYLVLDEADRMLDMGFEPQIR 228
Score = 109 bits (263), Expect = 1e-24
Identities = 46/65 (70%), Positives = 57/65 (87%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHE 435
II+QIRPDRQTLMWSATWPKEV+ LA D+L DY+ I +GSL L+ANH ILQIVD+C++HE
Sbjct: 230 IIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHE 289
Query: 436 KENKL 450
KE+ +
Sbjct: 290 KEHNV 294
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/88 (54%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT--- 172
A QI + F + +R CV+GG EQ +L+RG EI++ TPGR+ID L
Sbjct: 157 AIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRV 216
Query: 173 TNLQRCTYLVLDEADRMLDMGFEPQIRK 256
TN QRCTYLVLDEADRM DMGFEPQI K
Sbjct: 217 TNCQRCTYLVLDEADRMFDMGFEPQITK 244
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL---SANHNI-LQIVDI 420
+II+ IRPDRQT+M+SAT+P++++ LA L I+I +G + N+ L + D
Sbjct: 252 RIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQNVALGLQDS 311
Query: 421 CQEHEKENK 447
E E E K
Sbjct: 312 DDEAEAEEK 320
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI A F H + +R +GG Q R L+ G +++ TPGRL DF+EKG +L
Sbjct: 801 ANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSL 860
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
+ +L+LDEADRMLDMGFEP IR+ + D+
Sbjct: 861 KGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDK 895
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/68 (36%), Positives = 45/68 (66%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
+ +RQTLM+SAT+P+E+++LA D+L DY+ + +G + +I Q V ++EK ++L
Sbjct: 895 KSERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVG-GTTSDIEQTVIEVTDNEKRDRL 953
Query: 451 NVLLQEIG 474
+L + G
Sbjct: 954 TQILGDAG 961
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVE+KR A+ ++ + G+P +HGD+ QQER+E L
Sbjct: 968 FVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEAL 1005
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +2
Query: 29 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 208
DF + S R V+GGA Q R+L+R +++ATPGRL+D +++G L +LVLD
Sbjct: 947 DFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLD 1006
Query: 209 EADRMLDMGFEPQIRK 256
EADRMLDMGFEPQIR+
Sbjct: 1007 EADRMLDMGFEPQIRR 1022
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVL 459
RQTLM+SAT+PKE++ LA D+L +YI + +G + S + NI Q V E +K + L L
Sbjct: 1035 RQTLMFSATFPKEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDL 1093
Query: 460 LQEIGQSQ 483
L G Q
Sbjct: 1094 LNASGPQQ 1101
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FVETK+ A+ + + + G+ +HGD++Q+ER+E L
Sbjct: 1106 FVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEAL 1143
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/78 (56%), Positives = 51/78 (65%)
Frame = +2
Query: 5 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 184
QQI A FG + VFGG K EQ++ L+ G EIV+ATPGRLID ++ TNL
Sbjct: 604 QQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLH 663
Query: 185 RCTYLVLDEADRMLDMGF 238
R TYLV DEADRM DMGF
Sbjct: 664 RVTYLVFDEADRMFDMGF 681
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
FV K +E ++ N+R+ + +HGD Q ER +VL
Sbjct: 735 FVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVL 772
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 14 QQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 190
+QV +F + S + C++GG P Q + G+++++ TPGR++DF+ +GT +L +
Sbjct: 161 KQVGNEFENLKSNLEVYCIYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKL 220
Query: 191 TYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
++VLDE DRMLDMGF + + L+ DR
Sbjct: 221 KHVVLDEVDRMLDMGFAESVEEVLAASYAEDR 252
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/83 (43%), Positives = 46/83 (55%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
AQQIQ+V G +V+ GG RE LE GV +V+ TPGR+ D + +G N
Sbjct: 172 AQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNT 231
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+ VLDEAD ML GF+ QI
Sbjct: 232 RDIKLFVLDEADEMLSRGFKDQI 254
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F T+RK + ++ + MHGD +Q+ERD ++
Sbjct: 336 FANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIM 373
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/93 (39%), Positives = 51/93 (54%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A+QI A F + ++ +GG QA LERG ++ TPGRL DF+ + L
Sbjct: 565 AKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYL 624
Query: 182 QRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQT 280
+L+LDEADRMLD+GF P I K + + T
Sbjct: 625 GSIQHLILDEADRMLDLGFGPDIHKLIEESNMT 657
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 271 RPDRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQIVDICQEHEKENK 447
+ RQTLM+SAT+P E++ LA +L DY+ + +G + N +I Q V EK +K
Sbjct: 659 KESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVG-GTNLDITQHVITVNGSEKRDK 717
Query: 448 LNVLLQEIGQS 480
L+ +L G++
Sbjct: 718 LHEILSATGEN 728
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/82 (42%), Positives = 45/82 (54%)
Frame = +2
Query: 41 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 220
T+ + V GG P Q L G ++V+ATPGRL+D L + TYLV+DE DR
Sbjct: 193 TARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD--------LYKITYLVMDEPDR 244
Query: 221 MLDMGFEPQIRKSLSKYAQTDR 286
ML MG E Q+RK + T R
Sbjct: 245 MLGMGMEEQLRKIVGLATGTSR 266
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
RQTL+WSAT P+ +++LA + + I I +G L A ++ Q V ++K KL
Sbjct: 268 RQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIA-PSVQQNVVFLYHYQKPQKL 323
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL-QRCTYLVLDEADRMLDMGFE 241
+ GG ++ +A L++GV ++IATPGRL+D L+ L + LV+DEADR+L++GFE
Sbjct: 678 IMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGFE 737
Query: 242 PQIRK 256
++R+
Sbjct: 738 EEMRQ 742
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/83 (39%), Positives = 42/83 (50%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QIQ+V G V+ GG E R L+ G IV TPGR+ D + +
Sbjct: 78 ANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRT 137
Query: 182 QRCTYLVLDEADRMLDMGFEPQI 250
+ LVLDEAD ML+ GF+ QI
Sbjct: 138 RSIKMLVLDEADEMLNKGFKEQI 160
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
F TKRK + ++ +R + MHGD Q+ER+ ++
Sbjct: 242 FCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIM 279
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 58.4 bits (135), Expect = 4e-09
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTT 175
A QI + G V+ + GG QA L + I+IATPGRLID LE KG
Sbjct: 45 AFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKG-F 103
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQ 247
+L+ YLV+DEADR+L+M FE +
Sbjct: 104 SLRTLKYLVMDEADRILNMDFEKE 127
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = +2
Query: 17 QVAADF---GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQ 184
Q+A F G ++ + GG +QA L +VIATPGRL D ++ T NL+
Sbjct: 90 QIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLK 149
Query: 185 RCTYLVLDEADRMLDMGFEPQIR 253
+ +LVLDEADR+LD F ++
Sbjct: 150 KIQFLVLDEADRLLDPSFGDDLK 172
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
A QI + A H + R+ + GG ++ DLE V++++ATPG L+ + +K
Sbjct: 468 ATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFF 527
Query: 182 QRCTYLVLDEADRMLDMGFE 241
T+LV+DEAD M D F+
Sbjct: 528 SDLTHLVIDEADTMFDASFK 547
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/63 (39%), Positives = 42/63 (66%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++ +G L L N+++ ++
Sbjct: 8 KKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIEFIEGMAP 63
Query: 430 HEK 438
EK
Sbjct: 64 GEK 66
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/54 (37%), Positives = 36/54 (66%)
Frame = +2
Query: 107 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
E GV++++ATPGR+++ + + +L V+DE D ML +GFE Q+++ L +
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILER 306
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/73 (28%), Positives = 42/73 (57%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
Q+I+E++ RQT+++SAT P ++ +A L + I+ GS L + Q++ +E
Sbjct: 301 QQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTK-AVKQLILWVEE 359
Query: 430 HEKENKLNVLLQE 468
K+ +L +L++
Sbjct: 360 KSKKKQLFSILKD 372
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 51.6 bits (118), Expect = 5e-07
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +2
Query: 116 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 256
V +++ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++II+ + +RQ L++SAT+P V+ E +L +IN+ + H + Q +E
Sbjct: 218 EQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MDELTLHGVTQYYAFVEE 275
Query: 430 HEKENKLNVLLQEIGQSQ 483
+K + LN L Q++ +Q
Sbjct: 276 KQKVHCLNTLFQKLQINQ 293
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 51.6 bits (118), Expect = 5e-07
Identities = 18/47 (38%), Positives = 34/47 (72%)
Frame = +2
Query: 116 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 256
V +++ATPGR++D ++K ++ +C LV+DEAD++L M F+ + +
Sbjct: 173 VHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQE 429
++II+ + +RQ L++SAT+P V+ E +L +IN+ + H + Q +E
Sbjct: 218 EQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINL--MDELTLHGVTQYYAFVEE 275
Query: 430 HEKENKLNVLLQEIGQSQ 483
+K + LN L Q++ +Q
Sbjct: 276 KQKVHCLNTLFQKLQINQ 293
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 50.8 bits (116), Expect = 9e-07
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A Q +V G+ + + GG K EQ R ++ IV+ TPGRL+ +++ T N
Sbjct: 135 AYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCTPGRLLQHMDE-TPN 191
Query: 179 LQRCT---YLVLDEADRMLDMGFEPQI 250
CT LVLDEADR+LDMGF P +
Sbjct: 192 FD-CTSLQILVLDEADRILDMGFAPTL 217
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 232 GI*TTNQKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 357
G T IIE + +RQTL++SAT + VK LA L Y+
Sbjct: 212 GFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 214
+ S ++ FGG ++ + L+ IV+ TPGR++ + T NL+ + +LDE
Sbjct: 141 YMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDEC 200
Query: 215 DRMLD 229
D+ML+
Sbjct: 201 DKMLE 205
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 608
FV++ ++ +S + + +PA+C+H Q+ER
Sbjct: 341 FVKSVQRCTALSHLLLKQNFPAICIHRGMKQEER 374
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 38 HTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 214
+ S ++ FGG ++ + L+ IV+ TPGR++ + T NL+ + +LDE
Sbjct: 141 YMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDEC 200
Query: 215 DRMLD 229
D+ML+
Sbjct: 201 DKMLE 205
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
N+ YLVLDEADRM+DMGFE +R S + + PKK +N +
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 66
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 414
I + RQTL++SAT PK+++ A+ L + +N+G +A+ +++Q++
Sbjct: 40 IFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDVIQVL 91
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 608
F E K ++I + G AV +HGDK+Q+ER
Sbjct: 93 FAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEER 126
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 176 NLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDRL*CGQLLGPKK*RNLLR 337
N+ YLVLDEADRM+DMGFE +R S + + PKK +N +
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 66
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/53 (30%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIV 414
I + RQTL++SAT PK+++ A+ L + +N+G +A+ +++Q++
Sbjct: 40 IFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDVIQVL 91
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQER 608
F E K ++I + G AV +HGDK+Q+ER
Sbjct: 93 FAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEER 126
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
A Q++ V G Y C VF G E+ + + I + TPGR+ +E+
Sbjct: 94 AVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVKYLIEQKYLK 152
Query: 179 LQRCTYLVLDEADRMLDMGFEPQI 250
+ +LDEAD++LD F+ QI
Sbjct: 153 TESVRMFILDEADKLLDESFQQQI 176
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +2
Query: 74 GAPKREQARDLERGVEIVIATPGR-LIDFLEKGTTNLQRC----TYLVLDEADRMLDMGF 238
G PK E+ D ++G +I P R L +E+ R T V+ ADRM+DMGF
Sbjct: 165 GLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADRMIDMGF 224
Query: 239 EPQIRKSL 262
EP+++K L
Sbjct: 225 EPEVQKIL 232
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +1
Query: 280 RQTLMWSATWPKEVKKLAEDYL 345
RQT+M++AT P +V++LA++YL
Sbjct: 263 RQTVMFTATMPPQVERLAKNYL 284
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 116 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKSLSK 268
V+IV TPG+L DF+ +L + + +LDEAD +L G I K +K
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNK 186
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +2
Query: 65 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 244
+FGG + ++ L G E+++ATP + L++ T+L R ++V D+AD ML F
Sbjct: 298 IFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDAD-MLAEYFTA 356
Query: 245 QIR 253
+I+
Sbjct: 357 EIK 359
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 56 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 169
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2
Query: 197 LVLDEADRMLDMGFEPQIRKSLSK 268
LVLDEADRMLDMGF IR+ L+K
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTK 30
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/53 (28%), Positives = 35/53 (66%)
Frame = +1
Query: 250 QKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 408
++++ ++ RQ L++SAT+ ++K LAE L + ++I + + + +A+ +LQ
Sbjct: 25 RRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-ARRNTASDQVLQ 76
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 36.3 bits (80), Expect = 0.021
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Frame = +2
Query: 2 AQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIATPGRLIDFLEKGT 172
A+Q +VA G H +++ N V G P+ ++ D I+I TPG L+D++ K
Sbjct: 186 ARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGTPGTLLDWIRKSK 240
Query: 173 T-NLQRCTYLVLDEADRMLDM-GFEPQ---IRKSLSKYAQ 277
++ + VLDEAD M+ + G + Q I KSL K Q
Sbjct: 241 CFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQ 280
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 116 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKSL 262
V +V+ + EK +N+Q YLV+DEADRM++ G ++ L
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMVEQGHYEELSSIL 364
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 50 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 178
V+ + GG +Q R L++ EIV+ATPGRL + + + T+
Sbjct: 247 VKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTH 289
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 113 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKSLSKYAQTDR 286
G + V+ATPGR + + + L Y+V DEADR + F + + L +A+ R
Sbjct: 387 GGDSVVATPGRFLHVVMEMELKLSSVEYVVFDEADRQ-TLLFSATLPRLLVDFAKAGR 443
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 DLERGVEIVIATPGRLIDFL 160
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 161 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKSL 262
E+ +N+Q YLV+DEADRM++ G ++ L
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSIL 35
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 148
A QIQ+V G V+ GG E R L+ G IV TPGR+
Sbjct: 16 ANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRV 64
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 119 EIVIATPGRLIDFL--EKGTTNLQRCTYLVLDEADRMLDMG 235
+I++ TP RL+ L E L +L+LDEAD++ + G
Sbjct: 258 DILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEG 298
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLVS 626
FV++K +A+ + + G +H D+TQ +RD ++ S
Sbjct: 389 FVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKS 428
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 AQQIQQVAADFGHTSYVRNTCVFGGAPKREQA-RDLERGVEIVIATPGRLIDFLEKGTTN 178
+Q + +V+ G S V + ++E+ +D IVI TP RL + +++
Sbjct: 239 SQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRLWEIVQEHEHL 298
Query: 179 LQRCTYLVLDEADRML 226
QR +V+DE D+ L
Sbjct: 299 FQRTKRIVIDEVDKTL 314
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 197 LVLDEADRMLDMGFEPQI 250
LVLDEAD ML+ GF+ QI
Sbjct: 39 LVLDEADEMLNKGFKEQI 56
>SB_17200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +3
Query: 369 RIITTFRKSQHSSNCRYLSXXXXXXXXXXXXXXNWTKSRTWCENNNFVETKRKAEN 536
R+ T+ R Q+ NCRY+ + ++ + EN ++E R EN
Sbjct: 58 RVPTSMRLPQNIENCRYIENCRYIENCRYIENCRYIENCRYIENCRYIENCRYIEN 113
>SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = -1
Query: 219 RSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRACSLLGAPPNTHVLRT*DV 40
+ S +T+ V C + K S+ + T LSKS+A G P + + V
Sbjct: 193 KEISKKTEQVRSCGIAAQMGKDSMGVIKNISTTGNDLSKSKAMRSKGGPDSKAPSKKATV 252
Query: 39 CPKSAAT 19
P +A +
Sbjct: 253 RPSTAGS 259
>SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 255 FLICGSN-PISNIRSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRACSLLG 79
FL+ SN PI+N+R V+ + F+ S+ + A +S PL+ +LG
Sbjct: 14 FLVLSSNDPIANLRQTYINLTIVNDDNATIGFTSSSVTVAENAGNLSLPLTVK--SGILG 71
Query: 78 AP 73
P
Sbjct: 72 IP 73
>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 253 KIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 405
K++E + W TW K +KL Y G+ + G +HN+L
Sbjct: 267 KVVELRDQEFVIKWWKGTWLKSWEKLPSQYAGNSCVLFRGQYCQYRSHNLL 317
>SB_4570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 261 NDFLICGSNPISNIR 217
NDF CG++P+SN+R
Sbjct: 114 NDFEFCGADPLSNLR 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,892,157
Number of Sequences: 59808
Number of extensions: 408425
Number of successful extensions: 1194
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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