Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0414
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    76   1e-15
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.6  
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    23   6.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 75.8 bits (178), Expect = 1e-15
 Identities = 34/85 (40%), Positives = 51/85 (60%)
 Frame = +2

Query: 2   AQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 181
           A QI      F H + ++    +GG   + Q + +  G  +++ATPGRL+DF+++G    
Sbjct: 262 AIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTF 321

Query: 182 QRCTYLVLDEADRMLDMGFEPQIRK 256
           +   ++VLDEADRMLDMGF P I K
Sbjct: 322 ENVNFVVLDEADRMLDMGFLPSIEK 346



 Score = 43.6 bits (98), Expect = 5e-06
 Identities = 22/64 (34%), Positives = 41/64 (64%)
 Frame = +1

Query: 271 RPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKL 450
           +  RQTLM+SAT+P E+++LA  +L +YI + +G +   A  ++ Q + + ++ +K  KL
Sbjct: 356 KQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL 414

Query: 451 NVLL 462
             +L
Sbjct: 415 EEIL 418



 Score = 35.5 bits (78), Expect = 0.001
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 507 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 620
           FVETKR A+ ++  +    +P   +HGD+ Q+ER+  L
Sbjct: 429 FVETKRNADYLASLMSETQFPTTSIHGDRLQREREMAL 466


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 146 LIDFLEKGTTNLQRCTYLVLDEADR 220
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 294 HQSLSVWAYLLNDFLICGSNPISNIR 217
           HQSL++  Y+     + G NP+  ++
Sbjct: 77  HQSLAMCRYVAKQINLAGDNPLEALQ 102


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 274 PDRQTLMWSATWPKEVKKLAEDYLGDY 354
           P+R+ ++W A   ++++   E YLG +
Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 274 PDRQTLMWSATWPKEVKKLAEDYLGDY 354
           P+R+ ++W A   ++++   E YLG +
Sbjct: 559 PNRERVLWPAHNVRDLRLWTEVYLGSW 585


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,378
Number of Sequences: 2352
Number of extensions: 14961
Number of successful extensions: 241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)