Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0412
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   5.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   6.5  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.7  
AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        23   8.7  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        23   8.7  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   8.7  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +2

Query: 11  PEVAHTPXXXXXXXXIKSSYKPPPEKTIEEILAADQEDESLRKYKEALLGQAQA 172
           PEV+ TP         +++   PP +  EE+    +     + YKEA+ G   A
Sbjct: 668 PEVSSTPVRRSQ----RATAGVPPARYDEEVYLVKESVAEPKTYKEAVSGPQSA 717


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 104 LAADQEDESLRKYKE-ALLGQAQ 169
           L+ D+E ESLR+ KE   LGQ +
Sbjct: 56  LSLDEEKESLRREKERQALGQLE 78


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 459 DSVLHXAPRGCAVRDMAXGRT 521
           +S++H  PRG   R    GRT
Sbjct: 157 ESMIHQLPRGWEERSAQNGRT 177


>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 453 FGGIGADHMSHLVNWNAQSVGLLHVLQTVHDLALND 346
           FGG  A  +    + +A ++ +++ + T+ D  LND
Sbjct: 69  FGGGSAGELGENRSLHAHALNVMNFIGTLIDYGLND 104


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 453 FGGIGADHMSHLVNWNAQSVGLLHVLQTVHDLALND 346
           FGG  A  +    + +A ++ +++ + T+ D  LND
Sbjct: 69  FGGGSAGELGENRSLHAHALNVMNFIGTLIDYGLND 104


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 255 ASSRPTTHNASFFTITLRGSSGSTMTAPAWACPSSAS 145
           +SS     +A+ F   LRG+SGS +++ + +  +S+S
Sbjct: 17  SSSASLRSSAANFAAWLRGNSGSPLSSISSSSRNSSS 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,341
Number of Sequences: 2352
Number of extensions: 10903
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)