Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0412
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p pro...   126   1e-29
AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA...   126   1e-29
AE013599-1882|AAF58252.2|  475|Drosophila melanogaster CG30070-P...    29   4.1  

>AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p
           protein.
          Length = 201

 Score =  126 bits (305), Expect = 1e-29
 Identities = 59/71 (83%), Positives = 63/71 (88%)
 Frame = +1

Query: 289 KKQVFVIKEGVQYRIRIDFIVQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKTEIQS 468
           KKQ+FVIKEGVQY++RIDFIVQREIVHGLKYVQKT RLGV VDKM HMVGSYPPK EIQ 
Sbjct: 96  KKQLFVIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPKKEIQF 155

Query: 469 YTXPPEDAPSG 501
           Y  P E+APSG
Sbjct: 156 YLTPAEEAPSG 166



 Score =  105 bits (253), Expect = 3e-23
 Identities = 50/64 (78%), Positives = 57/64 (89%)
 Frame = +2

Query: 62  SSYKPPPEKTIEEILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVV 241
           ++Y+ PPEKTIEEI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V 
Sbjct: 20  ANYQAPPEKTIEEIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVE 79

Query: 242 GRDD 253
           GRDD
Sbjct: 80  GRDD 83


>AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA
           protein.
          Length = 201

 Score =  126 bits (305), Expect = 1e-29
 Identities = 59/71 (83%), Positives = 63/71 (88%)
 Frame = +1

Query: 289 KKQVFVIKEGVQYRIRIDFIVQREIVHGLKYVQKTYRLGVPVDKMTHMVGSYPPKTEIQS 468
           KKQ+FVIKEGVQY++RIDFIVQREIVHGLKYVQKT RLGV VDKM HMVGSYPPK EIQ 
Sbjct: 96  KKQLFVIKEGVQYKVRIDFIVQREIVHGLKYVQKTSRLGVNVDKMKHMVGSYPPKKEIQF 155

Query: 469 YTXPPEDAPSG 501
           Y  P E+APSG
Sbjct: 156 YLTPAEEAPSG 166



 Score =  105 bits (253), Expect = 3e-23
 Identities = 50/64 (78%), Positives = 57/64 (89%)
 Frame = +2

Query: 62  SSYKPPPEKTIEEILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKLALCVV 241
           ++Y+ PPEKTIEEI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKKLAL V 
Sbjct: 20  ANYQAPPEKTIEEIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVE 79

Query: 242 GRDD 253
           GRDD
Sbjct: 80  GRDD 83


>AE013599-1882|AAF58252.2|  475|Drosophila melanogaster CG30070-PA
           protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 291 KAGIRDKGGCTIPNKDRFYRSTRDRARSEVRAED 392
           KA  R+K G T+ ++  FY   RD+ RS   ++D
Sbjct: 84  KAASREKRGLTLMSRSVFYAMLRDKLRSPSSSKD 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,250,425
Number of Sequences: 53049
Number of extensions: 520940
Number of successful extensions: 1443
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)