Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0411
(624 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 164 1e-39
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 134 2e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 125 1e-27
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 124 1e-27
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 124 2e-27
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 124 2e-27
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 124 2e-27
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 119 7e-26
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 117 2e-25
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 113 2e-24
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 113 4e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 111 1e-23
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 109 4e-23
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 108 9e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 107 2e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 107 2e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 106 4e-22
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 106 4e-22
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 104 2e-21
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 102 8e-21
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 99 4e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 4e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 100 6e-20
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 98 1e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 97 2e-19
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 95 2e-18
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 95 2e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 5e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 2e-17
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 91 3e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 87 2e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 85 1e-15
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 82 9e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 2e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 9e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 1e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 1e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 76 6e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 8e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 2e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 75 2e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 2e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 74 3e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 3e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 73 4e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 6e-12
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 73 7e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 71 2e-11
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 71 3e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 3e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 70 4e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 69 7e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 69 9e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 68 2e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 68 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 2e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 3e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 5e-10
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 66 6e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 66 9e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 65 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 1e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 2e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 64 2e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 64 3e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 63 5e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 63 5e-09
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 63 5e-09
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 63 5e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 6e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 6e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 63 6e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 6e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 1e-08
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 1e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 61 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 61 2e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 3e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 60 4e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 4e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 56 5e-07
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 54 2e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 53 6e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 52 1e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 1e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 49 8e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 6e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 44 0.004
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.007
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 41 0.021
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 40 0.064
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 37 0.34
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.0
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.8
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.8
UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 34 3.2
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.2
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 32 9.7
UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA - Su... 32 9.7
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 164 bits (399), Expect = 1e-39
Identities = 85/143 (59%), Positives = 90/143 (62%)
Frame = +2
Query: 80 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRX 259
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 260 XXXXXXXXXXXXXXXXHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 439
YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 440 YNPNIL*RLGFVFLFTVGGLTGV 508
Y+P+IL LGFVFLFTVGGLTGV
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGV 149
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 134 bits (324), Expect = 2e-30
Identities = 63/82 (76%), Positives = 67/82 (81%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILP
Sbjct: 174 ITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILP 233
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFGIISH+I E GKKETFG L
Sbjct: 234 GFGIISHMIFNESGKKETFGML 255
Score = 100 bits (239), Expect = 3e-20
Identities = 49/98 (50%), Positives = 61/98 (62%)
Frame = +2
Query: 215 FTRKRKKRNFWLFRXXXXXXXXXXXXXXXXXHHIFTVGIDIDTRAYFTSATIIIAVPTGI 394
F KK F + HH+FT+G+D+DTRAYFTSAT+IIA+PTGI
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGI 302
Query: 395 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 508
KIF +AT G ++ N IL +GF+FLFTVGGLTGV
Sbjct: 303 KIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGV 340
Score = 62.9 bits (146), Expect = 6e-09
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+L+NSS+D+ LHDTYY VAHFHYVLS+GAV +LG +
Sbjct: 341 VLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGF 377
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 125 bits (301), Expect = 1e-27
Identities = 57/80 (71%), Positives = 63/80 (78%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 VTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 189 GFGIISHIISQERGKKETFG 248
GFGIISH+++ GKKE FG
Sbjct: 250 GFGIISHVVAYYAGKKEPFG 269
Score = 103 bits (248), Expect = 3e-21
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFT 349
Query: 488 VGGLTGV 508
VGGLTG+
Sbjct: 350 VGGLTGI 356
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSS+DI LHDTYYVVAHFHYVLS+GAV ++ +
Sbjct: 357 VLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGF 393
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 124 bits (300), Expect = 1e-27
Identities = 58/80 (72%), Positives = 63/80 (78%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 189 GFGIISHIISQERGKKETFG 248
GFG+ISHI++ GKKE FG
Sbjct: 250 GFGMISHIVTYYSGKKEPFG 269
Score = 105 bits (252), Expect = 9e-22
Identities = 44/67 (65%), Positives = 59/67 (88%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFT 349
Query: 488 VGGLTGV 508
VGGLTG+
Sbjct: 350 VGGLTGI 356
Score = 65.7 bits (153), Expect = 9e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSS+DI LHDTYYVVAHFHYVLS+GAV ++G +
Sbjct: 357 VLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGF 393
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 124 bits (299), Expect = 2e-27
Identities = 57/80 (71%), Positives = 63/80 (78%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 191 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 250
Query: 189 GFGIISHIISQERGKKETFG 248
GFG+ISH+++ GKKE FG
Sbjct: 251 GFGMISHVVTYYAGKKEPFG 270
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSS+DI LHDTYYVVAHFHYVLS+GAV +L +
Sbjct: 358 VLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGF 394
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 410 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 508
LAT+HG I ++P +L LGF+FLFTVGGLTG+
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGI 357
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 124 bits (298), Expect = 2e-27
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 190 VTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 249
Query: 189 GFGIISHIISQERGKKETFG 248
GFG+ISH+++ GKKE FG
Sbjct: 250 GFGMISHVVTYYAGKKEPFG 269
Score = 103 bits (248), Expect = 3e-21
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFT 349
Query: 488 VGGLTGV 508
VGGLTG+
Sbjct: 350 VGGLTGI 356
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSSIDI LHDTYYVVAHFHYVLS+GAV ++ +
Sbjct: 357 VLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGF 393
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 124 bits (298), Expect = 2e-27
Identities = 60/82 (73%), Positives = 64/82 (78%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILP
Sbjct: 193 VTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILP 252
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFGIISHI+S G K FG L
Sbjct: 253 GFGIISHIVSTFSG-KPVFGYL 273
Score = 99 bits (238), Expect = 4e-20
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT
Sbjct: 292 HHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFT 351
Query: 488 VGGLTGV 508
+GGLTG+
Sbjct: 352 IGGLTGI 358
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANS +DI LHDTYYVVAHFHYVLS+GAV L +
Sbjct: 359 VLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGF 395
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 119 bits (286), Expect = 7e-26
Identities = 56/82 (68%), Positives = 63/82 (76%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+P
Sbjct: 190 VTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIP 249
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFG++SHI+S G K FG L
Sbjct: 250 GFGMVSHIVSAFSG-KPVFGYL 270
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/67 (62%), Positives = 54/67 (80%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT
Sbjct: 289 HHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFT 348
Query: 488 VGGLTGV 508
+GGLTGV
Sbjct: 349 IGGLTGV 355
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 117 bits (282), Expect = 2e-25
Identities = 56/80 (70%), Positives = 62/80 (77%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILP
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILP 257
Query: 189 GFGIISHIISQERGKKETFG 248
GFG+ISHI+S +K FG
Sbjct: 258 GFGMISHIVS-TFSRKPVFG 276
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/67 (62%), Positives = 55/67 (82%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT
Sbjct: 297 HHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFT 356
Query: 488 VGGLTGV 508
+GGLTG+
Sbjct: 357 IGGLTGI 363
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANS +DI+LHDTYYVVAHFHYVLS+GAV + +
Sbjct: 364 VLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGF 400
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 113 bits (273), Expect = 2e-24
Identities = 72/163 (44%), Positives = 81/163 (49%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 187 ITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQ 246
Query: 189 GFGIISHIISQERGKKETFGCLE*FMLY*QLGY*DLLFEXXXXXXXXXXXXXXXXXXXXX 368
+ ++ K + FM L Y DLLFE
Sbjct: 247 DLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQL 306
Query: 369 XXXXXXXXXKFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 497
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 307 SLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 113 bits (271), Expect = 4e-24
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFT
Sbjct: 203 HHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFT 262
Query: 488 VGGLTGV 508
VGGLTGV
Sbjct: 263 VGGLTGV 269
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
+LANSSIDI LHDTYYVVAHFHYVLS+GAV ++
Sbjct: 270 VLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIM 303
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3
Query: 165 EVYILILPGFGIISHIISQERGKKETFGCL 254
EVYILILPGFG+ISHIISQE GKKE FG L
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTL 184
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 111 bits (267), Expect = 1e-23
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP
Sbjct: 296 VTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILP 355
Query: 189 GFGIISHIISQERGKKETFGCL 254
FG+ISHI++ KK FG L
Sbjct: 356 AFGVISHIVA-TFSKKPIFGYL 376
Score = 77.0 bits (181), Expect = 3e-13
Identities = 34/67 (50%), Positives = 50/67 (74%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT
Sbjct: 395 HHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFT 454
Query: 488 VGGLTGV 508
+GG TG+
Sbjct: 455 LGGTTGI 461
Score = 50.4 bits (115), Expect = 3e-05
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAV 597
IL+ + +D HDTYYVVAHFHYV+S+GAV
Sbjct: 462 ILSQAGVDRAYHDTYYVVAHFHYVMSLGAV 491
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 109 bits (263), Expect = 4e-23
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILP
Sbjct: 194 VTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILP 253
Query: 189 GFGIISHIISQERGKKETFG 248
GFG++SHII+ KK FG
Sbjct: 254 GFGLVSHIIA-TFSKKRVFG 272
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLF 484
HH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LF
Sbjct: 293 HHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLF 351
Query: 485 TVGGLTGV 508
T+GG+TG+
Sbjct: 352 TIGGITGI 359
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 445 P*YFMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
P YF F + I IL+N+ ID ++HDT+YVV HFHYVLS+GAV + G +
Sbjct: 340 PMYFAA-GFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGF 396
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 108 bits (260), Expect = 9e-23
Identities = 51/80 (63%), Positives = 59/80 (73%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+P
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIP 250
Query: 189 GFGIISHIISQERGKKETFG 248
GFGIISH++S KK FG
Sbjct: 251 GFGIISHVVS-TYSKKPVFG 269
Score = 62.5 bits (145), Expect = 8e-09
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 451
HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 290 HHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 107 bits (258), Expect = 2e-22
Identities = 54/82 (65%), Positives = 58/82 (70%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+P
Sbjct: 191 ITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIP 250
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFGIIS IS K FG L
Sbjct: 251 GFGIISTTIS-ANSNKSVFGYL 271
Score = 101 bits (243), Expect = 1e-20
Identities = 44/67 (65%), Positives = 59/67 (88%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT
Sbjct: 290 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFT 349
Query: 488 VGGLTGV 508
+GGL+GV
Sbjct: 350 IGGLSGV 356
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LAN+S+DI HDTYYVVAHFHYVLS+GAV L +
Sbjct: 357 VLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGW 393
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 107 bits (257), Expect = 2e-22
Identities = 51/80 (63%), Positives = 57/80 (71%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+P
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIP 250
Query: 189 GFGIISHIISQERGKKETFG 248
GFGI+SHI+S KK FG
Sbjct: 251 GFGIVSHIVS-TYSKKPVFG 269
Score = 91.9 bits (218), Expect = 1e-17
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFT
Sbjct: 290 HHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFT 349
Query: 488 VGGLTGV 508
VGGLTGV
Sbjct: 350 VGGLTGV 356
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 106 bits (255), Expect = 4e-22
Identities = 52/82 (63%), Positives = 59/82 (71%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILP
Sbjct: 233 VTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILP 292
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFGIIS I+S +K FG L
Sbjct: 293 GFGIISQIVS-TFSRKPVFGYL 313
Score = 87.4 bits (207), Expect = 2e-16
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFT
Sbjct: 332 HHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFT 391
Query: 488 VGGLTGV 508
VGG+TGV
Sbjct: 392 VGGVTGV 398
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LAN +D LHDTYYVVAHFHYVLS+GAV L +
Sbjct: 399 VLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGF 435
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 106 bits (255), Expect = 4e-22
Identities = 54/82 (65%), Positives = 59/82 (71%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+P
Sbjct: 217 ITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIP 276
Query: 189 GFGIISHIISQERGKKETFGCL 254
GFGIIS +IS K FG L
Sbjct: 277 GFGIISTVIS-ANSNKNVFGYL 297
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/67 (59%), Positives = 56/67 (83%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT
Sbjct: 316 HHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFT 375
Query: 488 VGGLTGV 508
+GGL+GV
Sbjct: 376 IGGLSGV 382
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LAN+S +I HDTYYVVAHFHYVLS+GAV L +
Sbjct: 383 VLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGW 419
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 104 bits (250), Expect = 2e-21
Identities = 45/67 (67%), Positives = 58/67 (86%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFT
Sbjct: 55 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFT 114
Query: 488 VGGLTGV 508
VGGLTG+
Sbjct: 115 VGGLTGI 121
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
ILANSS+DI LHDTYYVVAHFHYVLS+GAV ++G +
Sbjct: 122 ILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGF 158
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 150 FFGHPEVYILILPGFGIISHIISQERGKKETFG 248
FFGHPEVYILILPGFG+ISHI++ GKKE FG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFG 34
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 102 bits (244), Expect = 8e-21
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 227
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLS 352
Query: 228 GKKETFG 248
+FG
Sbjct: 353 NNDSSFG 359
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLF 484
HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLF
Sbjct: 380 HHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLF 439
Query: 485 TVGGLTGV 508
TVGG+TGV
Sbjct: 440 TVGGVTGV 447
Score = 46.4 bits (105), Expect = 6e-04
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGA 594
L+ S++DI HDT++VVAHFHYVLS+G+
Sbjct: 449 LSASALDILFHDTWFVVAHFHYVLSLGS 476
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 99 bits (238), Expect = 4e-20
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 329 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 508
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
+LANSS+DI LHDTYYVVAHFHYVLS+GA +
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACI 91
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 4e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 57 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 96.3 bits (229), Expect = 5e-19
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 488 VGGL 499
+GGL
Sbjct: 409 IGGL 412
Score = 37.1 bits (82), Expect(2) = 2e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 490 RRINRCILANSSIDITLHDTYYVVA 564
R ++ +LAN+S+DI HDTYYVVA
Sbjct: 424 RFVSGVVLANASLDIAFHDTYYVVA 448
Score = 30.3 bits (65), Expect(2) = 2e-04
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 544 DTYYVVAHFHYVLSIGAVLQLLGDY 618
+T + HFHYVLS+GAV + +
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGW 500
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 99.5 bits (237), Expect = 6e-20
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 227
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 228 GKKETFG 248
K FG
Sbjct: 266 AKLHVFG 272
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFVF 478
HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V
Sbjct: 293 HHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVL 352
Query: 479 LFTVGGLTGV 508
LFT+GGLTGV
Sbjct: 353 LFTIGGLTGV 362
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
ILAN+++ LHD+YYVVAHFHYVLS+GAV + G +
Sbjct: 363 ILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGF 399
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 98.3 bits (234), Expect = 1e-19
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +3
Query: 81 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCL 254
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG L
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYL 248
Score = 98.3 bits (234), Expect = 1e-19
Identities = 42/67 (62%), Positives = 56/67 (83%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT
Sbjct: 267 HHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFT 326
Query: 488 VGGLTGV 508
+GGLTG+
Sbjct: 327 LGGLTGI 333
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSSID+ LHDTYYVVAHFHYVLS+GAV + +
Sbjct: 334 VLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGF 370
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 97.5 bits (232), Expect = 2e-19
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 182
ITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 163 ITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2
Query: 332 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 496
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P
Sbjct: 208 ITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVP 267
Query: 189 GFGIISHIISQERGKKETFG 248
FG++S I+ Q KK FG
Sbjct: 268 VFGVVSQIV-QVYAKKPIFG 286
Score = 87.8 bits (208), Expect = 2e-16
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT
Sbjct: 307 HHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFT 366
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 367 IGGVTGV 373
Score = 36.3 bits (80), Expect = 0.60
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 463 IRFCIFIHSRRINRCILANSSIDITLHDTYYVVA 564
+ F + + ++ANSS+DI HDTYYVVA
Sbjct: 359 VGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P
Sbjct: 208 ITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVP 267
Query: 189 GFGIISHIISQERGKKETFG 248
FG++S I+ Q KK FG
Sbjct: 268 VFGVVSQIV-QVYAKKPIFG 286
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 5e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 51 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL*RLGFVFLF 484
HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ F
Sbjct: 295 HHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTF 354
Query: 485 TVGGLTGV 508
T GG TGV
Sbjct: 355 TFGGTTGV 362
Score = 58.4 bits (135), Expect = 1e-07
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQL 606
IL N++ID+ LHDTYYV+AHFH+VLSIGA++ L
Sbjct: 363 ILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGL 395
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILP 259
Query: 189 GFGIISHIISQERGKKETFG 248
FGIIS + K FG
Sbjct: 260 VFGIISEAVLFLTDKDRLFG 279
Score = 79.0 bits (186), Expect = 9e-14
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFT
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFT 359
Query: 488 VGGLTGV 508
VGGL+G+
Sbjct: 360 VGGLSGI 366
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAV 597
IL+ +S+DI LHDTYYVVAHFHY LS+GA+
Sbjct: 367 ILSAASLDIILHDTYYVVAHFHYTLSLGAI 396
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLP 252
Query: 189 GFGIISHII 215
FG+IS I+
Sbjct: 253 VFGLISTIV 261
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F
Sbjct: 292 HHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFL 351
Query: 488 VGGLTGVF 511
+G +TG+F
Sbjct: 352 IGAVTGLF 359
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +1
Query: 451 YFMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
YF+ I F + L+N IDI LHDTY+VV HFHYVLS+GAV+
Sbjct: 341 YFV-IMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVV 389
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLF 484
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLF
Sbjct: 256 HMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLF 315
Query: 485 TVGGLTGV 508
T+GGLTG+
Sbjct: 316 TIGGLTGI 323
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/50 (70%), Positives = 37/50 (74%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 158
ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 191 ITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+L+NSS+DI LHDTYYVVAHFHYVLS+GAV + G +
Sbjct: 324 VLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGF 360
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILP
Sbjct: 196 LTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILP 255
Query: 189 GFGIISHIISQERGKKETFG 248
GFGIIS ++S KE FG
Sbjct: 256 GFGIISLLLSTYT-TKEMFG 274
Score = 53.6 bits (123), Expect = 4e-06
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
+L N+ ID+ LHDT YVV HFH+VLSIGA++ ++
Sbjct: 363 VLGNAGIDLALHDTVYVVGHFHFVLSIGAIISMI 396
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 350 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGV 508
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGV 362
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 82.2 bits (194), Expect = 9e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 323 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 502
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 503 GV 508
G+
Sbjct: 356 GI 357
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LANSS+DI LHDTYYVVAHFHYVLS+GAV +L +
Sbjct: 358 VLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGF 394
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = +3
Query: 6 EITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 161
EITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 108 EITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/66 (54%), Positives = 40/66 (60%)
Frame = +1
Query: 412 SYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIG 591
SY + N N P FM IH + ILANSS DI LHDTYYVVAH HYVLS+G
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 592 AVLQLL 609
AV +L
Sbjct: 303 AVFAIL 308
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLF 484
HH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F
Sbjct: 273 HHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSF 332
Query: 485 TVGGLTGV 508
+GG +G+
Sbjct: 333 AIGGTSGI 340
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 454 FMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
F+++ F + + IL+N+S+D LHDTYYVVAHFH V+++ V +L
Sbjct: 323 FLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGIL 374
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 79.0 bits (186), Expect = 9e-14
Identities = 36/67 (53%), Positives = 46/67 (68%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 227
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVH 272
Query: 228 GKKETFG 248
+K FG
Sbjct: 273 ARKPIFG 279
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F
Sbjct: 300 HHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFM 359
Query: 488 VGGLTGV 508
+GGLTGV
Sbjct: 360 IGGLTGV 366
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQL 606
++A+ DI +HDTY+VV HFHYVL G+ L
Sbjct: 367 MVASVPFDIHVHDTYFVVGHFHYVLFGGSAFAL 399
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 234 K 236
K
Sbjct: 319 K 319
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F
Sbjct: 343 HHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFI 402
Query: 488 VGGLTGVF 511
+GG+TGVF
Sbjct: 403 IGGVTGVF 410
Score = 39.5 bits (88), Expect = 0.064
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAV 597
LA ID+ LHDTYYVV HFH+++ GA+
Sbjct: 411 LAVIPIDLILHDTYYVVGHFHFIV-YGAI 438
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F
Sbjct: 308 HHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFV 367
Query: 488 VGGLTGV 508
+GGLTG+
Sbjct: 368 IGGLTGI 374
Score = 37.9 bits (84), Expect = 0.20
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1
Query: 526 IDITLHDTYYVVAHFHYVLSIGAVLQL 606
ID L DTY+VVAHFHYVL G V L
Sbjct: 381 IDWQLTDTYFVVAHFHYVLIGGLVFAL 407
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 76.2 bits (179), Expect = 6e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 234 K 236
+
Sbjct: 350 R 350
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F
Sbjct: 374 HHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFI 433
Query: 488 VGGLTGVF 511
+GG+TGVF
Sbjct: 434 LGGVTGVF 441
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAV 597
LA+ +D+ LH TYYVV HFHY++ +GA+
Sbjct: 442 LASIPVDLVLHATYYVVGHFHYIV-MGAI 469
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 8e-13
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F
Sbjct: 245 HHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFL 304
Query: 488 VGGLTGV 508
+GGLTG+
Sbjct: 305 IGGLTGL 311
Score = 35.9 bits (79), Expect = 0.79
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 523 SIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
+ID+ + D+ +VV HFHYVL + L +LG
Sbjct: 317 AIDLGVSDSLFVVGHFHYVLGMAITLGILG 346
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
Query: 189 GFGIISHIIS 218
G++S I++
Sbjct: 266 AVGMVSSIVA 275
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFV 364
Query: 488 VGGLTGV 508
+GGLTGV
Sbjct: 365 IGGLTGV 371
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
++A+ D +HDTY+VVAHFHYVL GAV LLG
Sbjct: 372 MVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLG 406
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLF 484
HH+FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+ F
Sbjct: 299 HHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICF 358
Query: 485 TVGGLTGV 508
GG TG+
Sbjct: 359 CFGGFTGL 366
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
+L++ S+DI LHDTY+VV HFH VLS+ A LL
Sbjct: 367 LLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLL 400
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 212
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 213 ISQERGKKETFG 248
I Q ++ +G
Sbjct: 268 I-QRMARRRAYG 278
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F
Sbjct: 299 HHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFI 358
Query: 488 VGGLTGVF*P 517
VGG+TGVF P
Sbjct: 359 VGGVTGVFFP 368
Score = 37.1 bits (82), Expect = 0.34
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 445 P*YFMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLS 585
P FM + F +F + ++D+ LHDTY+V+ HFHY+++
Sbjct: 346 PMLFM-LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVN 391
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.1 bits (174), Expect = 2e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 234 K 236
+
Sbjct: 426 R 426
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/68 (29%), Positives = 39/68 (57%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF
Sbjct: 450 HHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFL 509
Query: 488 VGGLTGVF 511
V G TG++
Sbjct: 510 VAGFTGMW 517
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
L++ S+++++HDT+YVVAHFH +LS A+ + +
Sbjct: 518 LSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGF 553
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 227
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TY 287
Query: 228 GKKETFG 248
+K FG
Sbjct: 288 SRKNIFG 294
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 315 HHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTV 374
Query: 488 VGGLTGV 508
GG+TG+
Sbjct: 375 FGGMTGI 381
Score = 40.3 bits (90), Expect = 0.037
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
L S+D+ HDTY+VVAHFH+++ +GA +
Sbjct: 383 LGTVSLDVAWHDTYFVVAHFHFIM-VGATI 411
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +3
Query: 51 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 230
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYA 288
Query: 231 KKETFG 248
+K FG
Sbjct: 289 RKPLFG 294
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G R F T++IA+PTG+K+F L T+ + N +L +G + F
Sbjct: 315 HHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFI 374
Query: 488 VGGLTGV 508
G+TGV
Sbjct: 375 FAGITGV 381
Score = 36.7 bits (81), Expect = 0.45
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 496 INRCILANSSIDITLHDTYYVVAHFHYVL 582
I +LA IDI + +TY+VVAHFHYV+
Sbjct: 378 ITGVMLATVPIDIHVGNTYFVVAHFHYVI 406
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = +3
Query: 6 EITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 146
+ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 172 KITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.9 bits (171), Expect = 6e-12
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 10/72 (13%)
Frame = +3
Query: 63 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 212
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 213 ISQERGKKETFG 248
IS +K FG
Sbjct: 298 IS-THARKNIFG 308
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 329 HHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFV 388
Query: 488 VGGLTGVF 511
GGLTG+F
Sbjct: 389 NGGLTGLF 396
Score = 39.5 bits (88), Expect = 0.064
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
L N +D+ L DT +VVAHFH V+ + ++ +LG
Sbjct: 397 LGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLG 430
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 72.5 bits (170), Expect = 7e-12
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +3
Query: 66 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 245
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIF 285
Query: 246 G 248
G
Sbjct: 286 G 286
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/67 (43%), Positives = 46/67 (68%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F
Sbjct: 307 HHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFI 366
Query: 488 VGGLTGV 508
+GG++GV
Sbjct: 367 IGGISGV 373
Score = 37.1 bits (82), Expect = 0.34
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 496 INRCILANSSIDITLHDTYYVVAHFHYVLSIGAV 597
I+ LA+ I++ D+YYVVAH HYVL GA+
Sbjct: 370 ISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAI 403
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 146
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 190 VTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -3
Query: 145 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAV 11
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAV 44
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +3
Query: 57 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 236
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARK 273
Query: 237 ETFG 248
FG
Sbjct: 274 RLFG 277
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F
Sbjct: 298 HHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFV 357
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 358 LGGVTGV 364
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
+LA ++ D HDTY+VVAHFHYV+ G V LL
Sbjct: 365 MLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLL 398
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 173
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 174 ILILPGFGIISHIIS 218
I+ILP +GI+ ++S
Sbjct: 283 IMILPAWGILGDVLS 297
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G+ F T++I++P+ + + + T+ + Y+ +L LG VF+F
Sbjct: 327 HHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFG 386
Query: 488 VGGLTGVF 511
VGGLTG+F
Sbjct: 387 VGGLTGLF 394
Score = 36.7 bits (81), Expect = 0.45
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
L + S+D+ LHDT +VV HFH+ ++ +V+
Sbjct: 395 LGDISMDLYLHDTMFVVGHFHFTMAAASVM 424
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 227
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ +
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKM 259
Query: 228 GKKETFG 248
++E FG
Sbjct: 260 ARREIFG 266
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFL 347
Query: 488 VGGLTGVF*P 517
+GG+TGVF P
Sbjct: 348 LGGITGVFFP 357
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 68.9 bits (161), Expect = 9e-11
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F+
Sbjct: 334 HHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFS 393
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 394 IGGMTGV 400
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 51 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 230
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 231 KK 236
K+
Sbjct: 309 KR 310
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHAR 283
Query: 234 KETFG 248
K FG
Sbjct: 284 KMLFG 288
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT
Sbjct: 309 HHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFT 368
Query: 488 VGGLTG 505
+GGL+G
Sbjct: 369 IGGLSG 374
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 529 DITLHDTYYVVAHFHYVLSIGAVLQLL 609
D HDTY+VVAHFHYVL G++ +L
Sbjct: 383 DAQQHDTYFVVAHFHYVLIGGSIFAIL 409
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 185
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 191 ITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +3
Query: 63 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/68 (30%), Positives = 41/68 (60%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F
Sbjct: 297 HHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFI 356
Query: 488 VGGLTGVF 511
+GG TGV+
Sbjct: 357 IGGSTGVY 364
Score = 33.1 bits (72), Expect = 5.6
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAV 597
L + +ID TY+VVAHFHY+L +G V
Sbjct: 365 LGSIAIDRGFRGTYWVVAHFHYIL-VGTV 392
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +3
Query: 66 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 314 HHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFL 371
Query: 488 VGGLTGV 508
GGLTG+
Sbjct: 372 FGGLTGI 378
Score = 33.9 bits (74), Expect = 3.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVL 582
+LA+ +D L D+Y+++AHFHY L
Sbjct: 379 MLASPPLDFHLADSYFLIAHFHYTL 403
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
Score = 32.3 bits (70), Expect = 9.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 526 IDITLHDTYYVVAHFH 573
+D T HDTY+VV HFH
Sbjct: 364 LDFTTHDTYWVVGHFH 379
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 66.1 bits (154), Expect = 6e-10
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F+
Sbjct: 333 HHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFS 392
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 393 IGGMTGV 399
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 234 K 236
+
Sbjct: 309 R 309
Score = 33.5 bits (73), Expect = 4.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+LA D LH++ +V+AHFH V+ GAV + +
Sbjct: 400 LLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGF 436
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 65.7 bits (153), Expect = 9e-10
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFLF 484
HH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LF
Sbjct: 3 HHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLF 62
Query: 485 TVGGLTGV 508
T+GG TGV
Sbjct: 63 TLGGTTGV 70
Score = 55.2 bits (127), Expect = 1e-06
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
++ N+ +DI LHDTYY+VAHFH+VLS+GA+L
Sbjct: 71 VMGNAGMDIALHDTYYIVAHFHFVLSLGAIL 101
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/70 (41%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVF 478
HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLF 373
Query: 479 LFTVGGLTGV 508
+FTVGG+TGV
Sbjct: 374 IFTVGGVTGV 383
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 526 IDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
ID +HDTY+VVAHFHYVL G V L +
Sbjct: 390 IDFQVHDTYFVVAHFHYVLIGGMVFPLFATF 420
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 206
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F
Sbjct: 325 HHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFV 384
Query: 488 VGGLTGV 508
VGG++GV
Sbjct: 385 VGGVSGV 391
Score = 33.1 bits (72), Expect = 5.6
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 526 IDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
+D L DTY+VVAH HYVL V +LG
Sbjct: 398 LDWQLTDTYFVVAHLHYVLLGINVFPVLG 426
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 200
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 201 ISHII 215
+SHI+
Sbjct: 302 VSHIL 306
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F
Sbjct: 337 HHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFV 396
Query: 488 VGGLTGVF 511
GG++G F
Sbjct: 397 SGGVSGFF 404
Score = 41.5 bits (93), Expect = 0.016
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAV 597
LA SIDI LH TY+VV HFH V+ + A+
Sbjct: 405 LAQPSIDIYLHATYFVVGHFHLVMGVAAI 433
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFAR 273
Query: 234 KETFGCLE*FMLY*QLG 284
K FG + M++ Q+G
Sbjct: 274 KPLFGYRQ--MVWAQMG 288
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F
Sbjct: 299 HHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFL 358
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 359 LGGITGV 365
Score = 36.7 bits (81), Expect = 0.45
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 496 INRCILANSSIDITLHDTYYVVAHFHYVLSIGA 594
I +L+ + +D HD+Y+VVAHFH VL G+
Sbjct: 362 ITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGS 394
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 158
ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 191 ITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFI 370
Query: 488 VGGLTGV 508
+GGL+GV
Sbjct: 371 IGGLSGV 377
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +1
Query: 469 FCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
F IFI ++ ++A+ D+ HDTY+VVAHFHYVL GAV LLG
Sbjct: 366 FLIFIIGG-LSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLG 412
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 158
ITA A +L+ DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 159 HPEVYILILPGFGIISHIISQERGKKETFG 248
HPEVYI+++P GI S +I+ +K FG
Sbjct: 302 HPEVYIVLIPALGITSEVIA-TNARKPIFG 330
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F
Sbjct: 351 HHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFI 410
Query: 488 VGGLTGV 508
GG+TG+
Sbjct: 411 SGGVTGI 417
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVL 582
IL N+++DI LHDTYYVVAHFH V+
Sbjct: 418 ILGNNAMDIQLHDTYYVVAHFHLVM 442
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F
Sbjct: 47 HHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFL 105
Query: 488 VGGLTGV 508
+GG+TG+
Sbjct: 106 LGGVTGL 112
Score = 59.7 bits (138), Expect = 6e-08
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
+LANS +D+ +HD+YYVVAHFHYVLS+GAV LL
Sbjct: 113 VLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLL 146
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 487
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 488 VGGLTGV 508
GG TGV
Sbjct: 60 FGGTTGV 66
Score = 58.4 bits (135), Expect = 1e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQL 606
IL N +ID+ LHDTYYV+AHFH+VLSIGA++ L
Sbjct: 67 ILGNGAIDVALHDTYYVIAHFHFVLSIGAIIAL 99
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFAR 303
Query: 234 KETFG 248
K+ FG
Sbjct: 304 KQLFG 308
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F
Sbjct: 329 HHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFV 388
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 389 IGGVTGV 395
Score = 38.3 bits (85), Expect = 0.15
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAV 597
+LA ++ D H+TY++V+HFHYVL G V
Sbjct: 396 MLAMAAADYQYHNTYFLVSHFHYVLIAGTV 425
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGT---QINYNPNIL*RLGFV 475
HH+FT GI + ++F +A+ +A+P+G+++F +AT G ++ L LGF+
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFL 433
Query: 476 FLFTVGGLTGV 508
F+F +GGLTGV
Sbjct: 434 FIFVLGGLTGV 444
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 529 DITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
D HD+Y++VAH HYVL G V L +
Sbjct: 452 DWQAHDSYFIVAHLHYVLVGGMVFPLFAAF 481
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.9 bits (146), Expect = 6e-09
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSR 282
Query: 234 KETFG 248
K FG
Sbjct: 283 KNIFG 287
Score = 40.7 bits (91), Expect = 0.028
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 308 HHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLV 367
Query: 488 VGGLTGV 508
GG+TG+
Sbjct: 368 FGGMTGI 374
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 469 FCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
F F+ + LA S+D+ HDTY++VAHFH+++ +GA +
Sbjct: 362 FLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIM-VGATV 404
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLL 411
Query: 488 VGGLTGV 508
VGGLTG+
Sbjct: 412 VGGLTGM 418
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +3
Query: 63 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F
Sbjct: 331 HHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFV 390
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 391 LGGMTGV 397
Score = 36.3 bits (80), Expect = 0.60
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
++A ++ HD+Y+VVAH HYVL G V + G
Sbjct: 398 MVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFG 432
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 185
A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLF 484
HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLF
Sbjct: 30 HHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLF 89
Query: 485 TVGGLTG 505
T+GG G
Sbjct: 90 TMGGRQG 96
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILI 182
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I
Sbjct: 208 ITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIII 267
Query: 183 L 185
+
Sbjct: 268 I 268
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F
Sbjct: 307 HHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFL 366
Query: 488 VGGLTGV 508
+GG+TGV
Sbjct: 367 IGGITGV 373
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 84 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 248
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K FG
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFG 286
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 75 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFT 390
Query: 488 VGGLTGV 508
GGLTGV
Sbjct: 391 AGGLTGV 397
Score = 35.9 bits (79), Expect = 0.79
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 508 ILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLL 609
++A + D +HDTY++VAH HY L G V ++
Sbjct: 398 MVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPII 431
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.9 bits (141), Expect = 2e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +3
Query: 54 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF
Sbjct: 290 HHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFL 349
Query: 488 VGGLTGV 508
+GGLTGV
Sbjct: 350 IGGLTGV 356
Score = 39.1 bits (87), Expect = 0.085
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
LA S+ + L +TYYVV HFHYV+++ + G
Sbjct: 358 LALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFG 391
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +3
Query: 63 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFV 364
Query: 488 VGGLTGV 508
+GGLTGV
Sbjct: 365 IGGLTGV 371
Score = 36.7 bits (81), Expect = 0.45
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 529 DITLHDTYYVVAHFHYVLSIGAVLQLL 609
D +HDTY++VAH HYVL G V +L
Sbjct: 379 DWQVHDTYFIVAHLHYVLIGGFVFPML 405
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 60.1 bits (139), Expect = 4e-08
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FF 155
ITA A ++L DR + T FF P AGGG P+L+QHLF F+
Sbjct: 228 ITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFY 287
Query: 156 GHPEVYILILPGFGIISHIIS 218
HP VYI+ILP G++S I++
Sbjct: 288 SHPAVYIMILPAMGMVSDILA 308
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F
Sbjct: 338 HHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFV 397
Query: 488 VGGLTGVF 511
+GGL+G+F
Sbjct: 398 IGGLSGIF 405
Score = 47.2 bits (107), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
+A + +DI +HDTY++VAHFHYVL G + + G
Sbjct: 406 MAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFG 439
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 63 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLF 484
HH+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATF 363
Query: 485 TVGGLTGV 508
+GGLTGV
Sbjct: 364 VIGGLTGV 371
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 529 DITLHDTYYVVAHFHYVLSIGAVLQLL 609
D +HDT+++VAH HYVL G V +L
Sbjct: 379 DWQVHDTHFIVAHLHYVLVGGFVFPML 405
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 66 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F+
Sbjct: 328 HHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFS 387
Query: 488 VGGLTGV 508
+GG +GV
Sbjct: 388 IGGFSGV 394
Score = 33.9 bits (74), Expect = 3.2
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 451 YFMKIRFCIFIHSRRINRCILANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
+F I F I + IL+ ++D H++ +++AHFH V+ IG VL
Sbjct: 376 FFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVI-IGGVL 424
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF
Sbjct: 353 HHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFV 412
Query: 488 VGGLTGV 508
+GG+TG+
Sbjct: 413 IGGITGI 419
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 66 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
Score = 35.9 bits (79), Expect = 0.79
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 496 INRCILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
I +LAN +D +H+T ++VAHFH ++ G + +L Y
Sbjct: 416 ITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGY 456
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 457
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F
Sbjct: 341 HHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFI 400
Query: 488 VGGLTGVF 511
VGGL+G+F
Sbjct: 401 VGGLSGIF 408
Score = 52.8 bits (121), Expect = 6e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 111 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
GGG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 511 LANSSIDITLHDTYYVVAHFHYVLSIGAVL 600
+A +D+ HDTY++VAHFHY+L GA L
Sbjct: 409 MAAVPVDVYFHDTYFIVAHFHYIL-FGATL 437
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 137 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLF 253
+ ++IFW+S SLYFN IWYNF YY+T K K W F
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFF 40
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 314 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 403
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 188
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI
Sbjct: 208 ITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWL 264
Query: 189 GFGI 200
GI
Sbjct: 265 TSGI 268
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +2
Query: 38 TCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 160
TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 112 TCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 48 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 185
AG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 36 AGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFI 370
Query: 488 VGGLTGVF 511
+GG+TGVF
Sbjct: 371 IGGITGVF 378
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Frame = +3
Query: 54 AITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 200
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P G+
Sbjct: 216 ALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPALGV 275
Query: 201 ISHIISQERGKK 236
++ G++
Sbjct: 276 MAECFQTFTGRR 287
Score = 34.3 bits (75), Expect = 2.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 526 IDITLHDTYYVVAHFHYVLSIGAVLQLLGDY 618
+D TY+VVAHFHYV+ GA G Y
Sbjct: 384 LDYQFRGTYWVVAHFHYVMVAGATALFGGLY 414
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 335 IDTRAYFTSATIIIAVPTGIKIFR*LAT 418
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 49.2 bits (112), Expect = 8e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 427
HH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 54 HHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = +3
Query: 150 FFGHPEVYILILPGFGIISHIISQERGKKETFG 248
FFGHPEVY+LILP FGI+SHI FG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFG 33
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 51 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 218
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 37.9 bits (84), Expect = 0.20
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 523 SIDITLHDTYYVVAHFHYVLSIGAVLQLLGD 615
+ID +H YYVVAHFHY + AV+ L+G+
Sbjct: 390 AIDTIVHGDYYVVAHFHYFMVGVAVMGLMGN 420
Score = 32.7 bits (71), Expect = 7.3
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH F GI + T I++PT + I +AT+ G + + IL L F
Sbjct: 318 HHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFM 377
Query: 488 VGGLTGV 508
+GG++GV
Sbjct: 378 IGGVSGV 384
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +2
Query: 8 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 148
+YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 88 NYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -1
Query: 429 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 298
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 41.1 bits (92), Expect = 0.021
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 308 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 487
HH FT D + T T +++PTG + TI G ++ N +L L + F
Sbjct: 382 HHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFL 440
Query: 488 VGGLTGVF 511
+GGLTG+F
Sbjct: 441 IGGLTGIF 448
Score = 36.7 bits (81), Expect = 0.45
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 93 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 215
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 39.5 bits (88), Expect = 0.064
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 107
ITA A IT+LLTDRNLNT+FFDP
Sbjct: 179 ITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 37.1 bits (82), Expect = 0.34
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 502 RCILANSSIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
R L+ D T HDTYYVVAH HY+ + ++ +G
Sbjct: 28 RIALSQPGADGTYHDTYYVVAHIHYLGLLALLVVAVG 64
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 114 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 230
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 162 PEVYILILPGFGIISHIISQERGKK 236
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 120 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 233
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 159
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 517 NSSIDITLHDTYYVVAHFHYV--LSIGAVLQLLG 612
+++ DI +HDTY+V+ HF+ LS+G L LG
Sbjct: 36 DNTFDINVHDTYFVIGHFYVALFLSLGYYLTGLG 69
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.9 bits (74), Expect = 3.2
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +2
Query: 8 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 187
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 188 RIWYNFSYYFTRKRKKRNFWLFR 256
I ++ +K N ++
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYK 176
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 126 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 233
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.3 bits (70), Expect = 9.7
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 9 ITAFXXXXXXXXXAGAITILLTDRNLNT 92
ITA AGAIT+LLTDRN+NT
Sbjct: 174 ITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA -
Sulfolobus metallicus
Length = 595
Score = 32.3 bits (70), Expect = 9.7
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 523 SIDITLHDTYYVVAHFHYVLSIGAVLQLLG 612
S+D T+H+T ++ +HFH +L++ +V LLG
Sbjct: 382 SVDPTVHNTLWLPSHFHIMLALYSVGGLLG 411
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,367,622
Number of Sequences: 1657284
Number of extensions: 7017460
Number of successful extensions: 15206
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 14587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15169
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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