Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0410
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.011
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 34 0.019
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 33 0.033
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 33 0.033
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.076
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 32 0.100
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 31 0.23
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 30 0.30
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 30 0.30
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.30
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 30 0.40
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 30 0.40
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.70
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 29 0.70
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 29 0.93
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 28 1.2
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 28 1.6
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 27 2.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.1
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 27 2.1
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.8
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 2.8
SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease XPF... 27 2.8
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 27 3.8
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 27 3.8
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 26 6.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.6
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 6.6
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 26 6.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 6.6
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 25 8.7
SPBC1604.10 |srb7|med21|mediator complex subunit Srb7 |Schizosac... 25 8.7
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.7
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 25 8.7
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 25 8.7
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 25 8.7
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.7
>SPBC405.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 143
Score = 35.1 bits (77), Expect = 0.011
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +1
Query: 568 RQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRVRRFQREL 744
RQLK C+ Q+N+ LQ ++ SQK ++ ++QL+ Q ++Q+ RV+ Q EL
Sbjct: 71 RQLKR---NCDLYQRNLQKLQLLFKQQSQKNTLLEKQLSLQTELNQEKDKRVKILQDEL 126
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 34.3 bits (75), Expect = 0.019
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +2
Query: 185 DCYQREPVKQQGXXXXXXXXXXXXXXEITKELRIADERYQRVQTELKHTVEHLHEEQERI 364
D Y RE + + E + +A RY V+ E + EHL QE+
Sbjct: 326 DAYNREKRRARSLEERMSKEMLTKLGESNVDDGMAASRYDTVKREKERLSEHLKSLQEQY 385
Query: 365 VKIEAVKKSLEIEVKNISVRL--EEVEANAIVGGKRII-SKLEARIKDMELSWTKRRGDT 535
I++V K++ ++ ++ +RL + E N ++ R++ KL+ + E + T + T
Sbjct: 386 EHIQSVYKNVLLDRESYIMRLGNKISENNELLNENRVLKEKLQTYLDKKESNVTSKIKST 445
Query: 536 LKPS 547
+ S
Sbjct: 446 AENS 449
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 323 KHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEARIKDM 502
+ V LH ++ RI + VK+ + ++ + S+R + +A G I S LEA+ D+
Sbjct: 432 ERVVYELHRDENRIPALPEVKQIIRVDDPSPSIRQGRKKRHAKRSGVEIKSNLEAKSNDV 491
Query: 503 E 505
E
Sbjct: 492 E 492
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.5 bits (73), Expect = 0.033
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +1
Query: 460 QAYHQQARGSHQGHGAE-LDEE-KRRHAETIKILRKKE--RQLKEVIIQCEEDQKNISLL 627
QAY ++ Q E ++EE KR+ +K +R+KE R K+ + +E+++
Sbjct: 558 QAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREA 617
Query: 628 QDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRVR-RFQRELE 747
+ E+ +QK KRQ ++ +Q + R + + Q+ELE
Sbjct: 618 ERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELE 658
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.3 bits (70), Expect = 0.076
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 9 DEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNEL 185
+ ++ QLQ ++ V + IQ L E+ + NYE L K S+ + E+ ++N L
Sbjct: 1498 ENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNNL 1556
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 31.9 bits (69), Expect = 0.100
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 502 GAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQL 681
G E + +RR + LR+ + + + Q EED KN+ + L + V +++ L
Sbjct: 16 GQEEAKNRRRQFQEEDQLRRNNKSSNK-LSQNEEDAKNMDSVVQKLNELQNNVVAFQKLL 74
Query: 682 AEQEGMSQ-QSVTRVRRFQRELE 747
E+ +S Q + R F LE
Sbjct: 75 QEKTPLSSIQDLEGFREFMENLE 97
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +1
Query: 481 RGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKV 660
R Q +EL + ++ E K +RKK + I EE++ + ++ +D+ E+ S +
Sbjct: 103 RQQRQKRKSELTQLSQKVKEKFKKMRKKPARRIVTIANDEEEEDDQTMDEDAFERKSMQG 162
Query: 661 SIYKRQLAEQ 690
+ +R L ++
Sbjct: 163 ELKERNLTDK 172
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 30.3 bits (65), Expect = 0.30
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 481 RGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTS-QK 657
R QGH E DEE+ R + +K+R+++E + EE+++ I L+ S ++ S +K
Sbjct: 108 RAFEQGHVDEEDEERCRKMAS-DASEEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEK 166
Query: 658 VSI-YKRQLAEQE 693
S+ K+ AE++
Sbjct: 167 SSVPNKKHKAERK 179
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 30.3 bits (65), Expect = 0.30
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 290 DERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRI 469
DE+ R+ + + + L E+ ++ +++ S E E+ ++LE E+N V + +
Sbjct: 157 DEKATRLHLIIANLKKALKEKDAEVLNLQSHVSSKESELDRFKIKLETEESNWKVRLQVL 216
Query: 470 ISKL--EARIKDMELSWTKRRGDTLKPSRSSAR 562
SKL + R M+ T+R+ + P SS +
Sbjct: 217 ESKLATQDRKLRMQKKSTERKSLLVSPRVSSPK 249
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.30
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 EEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK-TSQKVSIYKRQLAEQE 693
EE+ R E ++ R+KERQ +E + E +K + LEK +++ + ++Q ++E
Sbjct: 87 EERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRKEE 146
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 87 EVEEIRGNYEQALRVKRSVEQQYEESQTRVNEL 185
++ EI+ NY++ L R +E ++ ESQ V EL
Sbjct: 813 KISEIKENYDELLTRYRELEGKFLESQAEVEEL 845
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.9 bits (64), Expect = 0.40
Identities = 17/82 (20%), Positives = 37/82 (45%)
Frame = +3
Query: 54 VAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQ 233
V R+ SL +V YE K+S+E+ QT ++ L+ ++ L + I++
Sbjct: 899 VVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKK 958
Query: 234 ELAIVAATTMRSPRNSASPMRD 299
+ +++ ++ + M D
Sbjct: 959 DEQTISSKYKELEKDYLNIMAD 980
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 6 RDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYE 158
RD RQL+ + ++ ++RIQS +EE L ++ E Q++
Sbjct: 1999 RDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQASETQWK 2049
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNI 415
+ ++ IADE+Y+ + E + E L +Q I + + +LE ++ +I
Sbjct: 907 LENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSI 956
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 29.1 bits (62), Expect = 0.70
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 532 HAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 687
++E KI+ E+ K+ I E Q+ + L+ SLEK+S + + +LAE
Sbjct: 244 NSEKEKIMHALEKAEKDADIYSEFIQQYMEQLESSLEKSSTAIENAQNRLAE 295
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 29.1 bits (62), Expect = 0.70
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 54 VAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSS 212
V ++ + +L EVEE + + + V +E+Q + + V + VIN +++S
Sbjct: 64 VVEKVLDTLKAEVEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKSITS 116
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 28.7 bits (61), Expect = 0.93
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 123 LRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAATTMRSPRNSASPMRDT 302
L ++ E+Q+EE ++R L + N K + + SPRNS P R
Sbjct: 128 LAEQQEFERQFEEEKSR---LAAVRKNTEQEKMGYRGGYQMHSTPWASSPRNSTIPQRSQ 184
Query: 303 SAY 311
S Y
Sbjct: 185 SFY 187
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 547 KILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLA--EQEGMSQQSVTR 720
K L+KK + + VII+C ED L+ D+ E ++ V R+L E++G +QS
Sbjct: 54 KKLKKKPKHIA-VIIECVEDGGIEGLIHDACELSAWCVCSNIRELTIYERKGFLKQSPEA 112
Query: 721 VRR 729
V +
Sbjct: 113 VEK 115
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 9 DEVQRQL-QVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNEL 185
D ++R+L Q+ ++ + + + ++ ++ R EQ R + ++YE ++R +EL
Sbjct: 417 DNLERKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSEL 476
Query: 186 TVINVNLSSSKAKIE 230
L KAK E
Sbjct: 477 QDAKRRLDELKAKAE 491
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +2
Query: 272 KELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKN 412
K++ ++ + + + + ++ L+EE+ + IEA K+ LEIE++N
Sbjct: 66 KDVSQVQQKIKEFEIQKANQIKQLNEEK---LSIEARKQQLEIEIRN 109
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 6 RDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQA 122
+ E++ +LQ T + ++++ SL EVE ++ EQA
Sbjct: 1368 KQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQA 1406
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 6 RDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQ 167
+ ++ QL + + QR++ SL+ + E Y+ + + +QYE SQ
Sbjct: 231 KSQLSSQLSDAVLEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQ 284
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 36 TLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEE 161
TL +Y Q+R+ G+V I Y + K ++++ E+
Sbjct: 492 TLPKYKAIQKRVGEYMGDVNNIVAEYRNDISDKNGIKEEEED 533
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/85 (22%), Positives = 44/85 (51%)
Frame = +2
Query: 272 KELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAI 451
K++++ D RY++ +EL+ + E ERI S E+E+ + + + + +
Sbjct: 816 KQVQLEDTRYRQHLSELESLNQRFTEISERI-------PSAELEISKLQLDVSACD-RLV 867
Query: 452 VGGKRIISKLEARIKDMELSWTKRR 526
G +R I +L++ +K + + ++R
Sbjct: 868 AGEERRILQLKSDLKSIRNNNERKR 892
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 577 KEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVTRVRRFQ 735
KE+ + EE+ N+ ++DS + +S K SI ++ + EG+ R F+
Sbjct: 236 KELAGESEEEGSNVDDVEDSGDSSSDKNSI-NHEIRDNEGLEDTVFVRNLLFE 287
>SPCC970.01 |rad16|rad10, rad20, swi9|DNA repair endonuclease
XPF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 892
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 141 VEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAATTMRSPRNSASPMRDTSAYRL 317
V + E+S V EL NVNLS S+ I+ L +TMR R S D + +
Sbjct: 193 VAESLEKSPANVVEL---NVNLSDSQKTIQSCLLTCIESTMRELRRLNSAYLDMEDWNI 248
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 IRGNYEQALRVKRSVEQQYEESQTRVNELTVI-NVNLSSSKAKIEQELAIV 248
+R E+ +K V++QYE+ Q + N+L + +++ S+ +E+ ++ V
Sbjct: 91 VRNALEEIELIKPIVKEQYEQYQCQKNDLDDLKKLSMKDSQPSLEKPVSYV 141
>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Frame = +1
Query: 451 CWWQAYHQQARGSHQGHGAELDEEKRR---HAETIKILRKKERQ---LKEVIIQCEEDQK 612
C AYH A+ S + + L+EE+++ ET + + R L + I Q K
Sbjct: 10 CSLSAYHHTAKQSIDKYKSVLEEERKKQLLRTETGLLRQSSSRSSSLLDQRIRQITAKDK 69
Query: 613 NISLLQDSLEK-TSQKVSIYKRQLAEQEGMSQQSVTRVRRFQRELE 747
++LL+ +L + +V + + L + + Q + + + EL+
Sbjct: 70 TVNLLRKTLNRPLLHEVDYHGKSLEILDMLLQSRNSMISSLRSELQ 115
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 90 VEEIRGNYEQ-ALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAATTMR 266
++ I+ N E+ A R+K +E +++ RVN + L S K + L + +R
Sbjct: 772 IQGIKKNVEETAARIKSQIEALIDDTILRVNIPNDFHRQLIGSNGKYVRRLEEKFSVRVR 831
Query: 267 SPRNSAS 287
PR S
Sbjct: 832 FPREDDS 838
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 25.8 bits (54), Expect = 6.6
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +1
Query: 508 ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQK-------NISLLQDSLEKTSQKVSI 666
+L + H E K + +KERQ + + Q EED K +I + S E+ + ++
Sbjct: 661 QLKSLTKNHQEIEKAIHRKERQRDQYMSQ-EEDSKLFNRSRVSIDSFKISKEENTPDFAV 719
Query: 667 YKRQLAEQEGMSQQSVTRVRRFQRE 741
Y ++ E +S V R RE
Sbjct: 720 YTIRIERLENGHVRSGWMVARRYRE 744
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +1
Query: 523 KRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQEGMS 702
+R + +K+L+ E++LKE + + KNI L S+ V+ L M+
Sbjct: 883 ERSQSRELKLLQASEKRLKEQVEERNSLIKNIVTRFTQLNTGSKPVNTNVEALTTISSMN 942
Query: 703 QQSVTRVRRFQRELE 747
Q R + ++
Sbjct: 943 QAVNMNFRELDKSIQ 957
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Frame = +1
Query: 592 QCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE--------------QEGMSQQSVTRVRR 729
QC+ Q+ I L+K ++ +S YK ++ E QEG +S+ RV++
Sbjct: 979 QCKSLQETIVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRVKK 1038
Query: 730 FQRE 741
+RE
Sbjct: 1039 LERE 1042
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 284 IADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANA 448
++DE Y ++T + HL E V+ SLE V ++ RL A A
Sbjct: 333 LSDEEYHMLRTAAIKIIRHLGVVGECNVQYALSPNSLEYRVIEVNARLSRSSALA 387
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 6.6
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 472 QQARGSHQGHGAEL--DEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEK 645
Q AR SHQ +G L D ++ A T + +L + I + Q S LQ+SLEK
Sbjct: 632 QYAR-SHQLNGITLSGDRSDKKGALTAGYRDYRNSRL-DAIKNVKTYQIKFSDLQESLEK 689
Query: 646 TSQKVSIYKRQLAEQEGMSQQSVTRVRRFQRE 741
++ + +++ Q++ +++F+R+
Sbjct: 690 CRSEIESFDQKITACLDDLQKAQLSLKQFERD 721
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 505 AELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTS 651
A L E+ +TIK + LKE++ + ++ Q+++ LQ+ K S
Sbjct: 247 ANLTEKLTLLLDTIKDVESYAHSLKELLKRRDQKQQDVEALQEYSAKLS 295
>SPBC1604.10 |srb7|med21|mediator complex subunit Srb7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 308 VQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRL 427
+ T KH +E + + Q I + + +KSLE E +++ ++L
Sbjct: 82 ISTAPKHQLEKIKKLQNSIEEKQLERKSLESENEDLKLQL 121
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 269 TKELRIADERYQRVQTELKHTVEHLHEEQERIV 367
+K++ + +R+ Q ELK + L EE+E+++
Sbjct: 363 SKKVATSLQRWNDAQKELKDNIPDLSEEEEKLL 395
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/56 (21%), Positives = 28/56 (50%)
Frame = +2
Query: 317 ELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLE 484
+LK + H E+Q+ + K + ++K+ + E++ + + E + +IS E
Sbjct: 401 QLKSRIAHFKEQQDSVTK-QRIEKAKQ-EIEKLEAKYNSKEEKTLTEADMVISSEE 454
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 69 IQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRV-NELTVINVNLSSSKAKIEQELAI 245
IQS E+E R + ++S+ + YE+ ++ EL + V +++ + E +
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTASYRNRGERSE 102
Query: 246 VAAT 257
+AA+
Sbjct: 103 LAAS 106
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 10 MRSRGSCR*LSTSTESPSAGYSHSPERLR-RFVATTSRPYALSAQSSS 150
+R RG S + P G ++ ++ F+ATT++ Y+LS +S S
Sbjct: 156 LRERGIKNSYSHNLGEPITGLTYLDDQSSVLFIATTNKTYSLSGKSLS 203
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 163 DSSYCCSTERLTRRACS*LPRISSTSPVSDCILRWAT 53
++ +CC E L R A S LPR DC+ +AT
Sbjct: 564 ETFFCCEEESLDRPAISTLPR---NKDEKDCLEVFAT 597
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,878
Number of Sequences: 5004
Number of extensions: 45349
Number of successful extensions: 246
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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