Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0410
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 38 0.009
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 37 0.016
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 37 0.016
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 36 0.029
At2g36200.1 68415.m04444 kinesin motor protein-related 34 0.12
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 33 0.15
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 33 0.15
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 33 0.27
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 33 0.27
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 32 0.35
At1g67230.1 68414.m07652 expressed protein 32 0.35
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 32 0.46
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)... 32 0.46
At1g68790.1 68414.m07863 expressed protein 31 0.61
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 31 0.61
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 31 0.81
At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zi... 31 0.81
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 31 0.81
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 31 1.1
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 30 1.4
At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family pr... 30 1.4
At5g20450.1 68418.m02431 expressed protein weak similarity to my... 30 1.4
At4g12020.1 68417.m01912 protein kinase family protein similar t... 30 1.4
At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein co... 30 1.4
At1g77800.1 68414.m09059 PHD finger family protein contains Pfam... 30 1.4
At5g65440.1 68418.m08230 expressed protein 30 1.9
At5g03660.1 68418.m00325 expressed protein low similarity to out... 30 1.9
At2g33610.1 68415.m04119 SWIRM domain-containing protein / DNA-b... 30 1.9
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 30 1.9
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 30 1.9
At1g55250.1 68414.m06310 expressed protein weak similarity to PU... 30 1.9
At5g27330.1 68418.m03263 expressed protein 29 2.5
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 29 2.5
At3g28370.1 68416.m03545 expressed protein 29 2.5
At2g17990.1 68415.m02091 expressed protein 29 2.5
At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 29 3.3
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 4.3
At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing ... 29 4.3
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 29 4.3
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 4.3
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 29 4.3
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 4.3
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 5.7
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 28 5.7
At5g26350.1 68418.m03150 hypothetical protein 28 5.7
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 28 5.7
At1g56660.1 68414.m06516 expressed protein 28 5.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 28 7.6
At4g36105.1 68417.m05139 expressed protein 28 7.6
At4g27595.1 68417.m03964 protein transport protein-related low s... 28 7.6
At3g28350.1 68416.m03543 hypothetical protein 28 7.6
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 28 7.6
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 28 7.6
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 28 7.6
At5g66560.1 68418.m08391 phototropic-responsive NPH3 family prot... 27 10.0
At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing ... 27 10.0
At5g08630.1 68418.m01026 DDT domain-containing protein low simil... 27 10.0
At4g13980.1 68417.m02162 heat shock transcription factor family ... 27 10.0
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 27 10.0
At3g55060.1 68416.m06115 expressed protein contains weak similar... 27 10.0
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 27 10.0
At2g23070.1 68415.m02750 casein kinase II alpha chain, putative ... 27 10.0
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 27 10.0
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEA 442
E KEL ++ +++ ELK ++ + E +E++ +E K LE+ + ++E +++
Sbjct: 329 ESNKELEKSNAHVNQLKHELKTSLRRISELEEKVEMVEVEKLQLEMALNGSKEQIEALQS 388
Query: 443 --NAIVGGKRIISKLEARIKDMEL 508
I G + KLEA +++EL
Sbjct: 389 RLKEIEGKLSEMKKLEAENQELEL 412
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/76 (23%), Positives = 42/76 (55%)
Frame = +2
Query: 275 ELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIV 454
E + ADE +++ + + E LHE+ R+ + K+++E+EV+ + +L ++ A
Sbjct: 387 EQQKADEEVKKLAEDQRRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASD 446
Query: 455 GGKRIISKLEARIKDM 502
G ++ +++ KD+
Sbjct: 447 GDAEVVKEVDIIFKDL 462
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/76 (23%), Positives = 42/76 (55%)
Frame = +2
Query: 275 ELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIV 454
E + ADE +++ + + E LHE+ R+ + K+++E+EV+ + +L ++ A
Sbjct: 387 EQQKADEEVKKLAEDQRRQKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASD 446
Query: 455 GGKRIISKLEARIKDM 502
G ++ +++ KD+
Sbjct: 447 GDAEVVKEVDIIFKDL 462
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 35.9 bits (79), Expect = 0.029
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 EVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTV 191
+++ Q Q R+I+SLT E+EE+RG +A R +E++ ++S L
Sbjct: 40 DLESQNQELARDNDAINRKIESLTAEIEELRGAESKAKRKMGEMEREIDKSDEERKVLEA 99
Query: 192 I---NVNLSSSKAKIEQELAIVAATTMRSPRNSASPMR 296
I L + A+++ EL I A T A +R
Sbjct: 100 IASRASELETEVARLQHEL-ITARTEGEEATAEAEKLR 136
>At2g36200.1 68415.m04444 kinesin motor protein-related
Length = 1056
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/93 (21%), Positives = 44/93 (47%)
Frame = +3
Query: 9 DEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELT 188
+ Q+QL+ D+Y R LT +++ N Q +V S ++ ++SQ + E
Sbjct: 427 ENYQKQLEELQDKYVGQVRECSDLTTKLDITEKNLSQTCKVLASTNEELKKSQYAMKEKD 486
Query: 189 VINVNLSSSKAKIEQELAIVAATTMRSPRNSAS 287
I S+ + Q+ I+ + ++ ++++S
Sbjct: 487 FIISEQKKSENVLVQQACILQSNLEKATKDNSS 519
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +2
Query: 263 EITKELRIADERYQRVQTEL---KHTVEHLHEEQERIVKI-EAVKKSLEIEVKNISVRLE 430
EIT EL+ A + Q + TEL K T+ E V++ EA K+ +VK + R+E
Sbjct: 524 EITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVE 583
Query: 431 EVE 439
E
Sbjct: 584 SAE 586
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 460 QAYHQQARGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL 639
+A + + G D+ KRR A+ + RK + K + Q EE + +S L+ L
Sbjct: 74 EAEQPSSNDNQDDDGRIHDKMKRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQEL 133
Query: 640 EKTSQK 657
EK Q+
Sbjct: 134 EKVKQQ 139
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/80 (21%), Positives = 41/80 (51%)
Frame = +1
Query: 508 ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 687
E++E++RR + ++ K RQLKE+ + + +L +E+T IY++ + E
Sbjct: 1542 EMNEKQRRFSNADLVIVK--RQLKEMEEAVSQLENTNEILSKEIEETGDARDIYRKVVVE 1599
Query: 688 QEGMSQQSVTRVRRFQRELE 747
+ + + +++ + +E
Sbjct: 1600 KSRSGSEKIEQLQNKMQNIE 1619
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +3
Query: 72 QSLTGEVEEIRGNYEQALRVKRSVEQQYEE-------SQTRVNELTVINVNLSSSKAKIE 230
+ L EVEE+R +YE + R++ ++E Q E + + +L +N NL S +
Sbjct: 1146 EELHKEVEELRKDYEDSRRMRANLEWQISELSDVAGRQEEEIRKLNALNENLESEVQFLN 1205
Query: 231 QEL 239
+E+
Sbjct: 1206 KEI 1208
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +2
Query: 278 LRIADERYQRVQTELKHTVEHLH--EEQERIVKIEA--VKKSLEI--EVKNISVRLEEVE 439
+RI++E+ Q ++E++H ++ E + +K E + K LEI E KN+S+R E
Sbjct: 204 MRISEEKSQ-AESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNMSMRSAEAA 262
Query: 440 ANAIVGGKRIISKLEA 487
+ G + I+KLEA
Sbjct: 263 NKQHLEGVKKIAKLEA 278
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/96 (21%), Positives = 46/96 (47%)
Frame = +1
Query: 460 QAYHQQARGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL 639
+A+ ++ L++EK R + + + ER++KE + E +Q+ L+ +L
Sbjct: 715 EAFEKEEENRRMREAFALEQEKERRIKEAREKEENERRIKEAREKAELEQR----LKATL 770
Query: 640 EKTSQKVSIYKRQLAEQEGMSQQSVTRVRRFQRELE 747
E+ ++ I +RQ E+ + V +R+L+
Sbjct: 771 EQEEKERQIKERQEREENERRAKEVLEQAENERKLK 806
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Frame = +1
Query: 358 EDRQDRGRQEVS*NRSQEHLCPSGRSRSQRYCWWQAYHQQARGSHQGHGAELDEEKRRHA 537
E+ R R+ + + +E R + + + ++A + EEK R
Sbjct: 720 EEENRRMREAFALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQI 779
Query: 538 ETIKILRKKERQLKEVIIQCEEDQKNISLLQDS-----LEKTSQKVSIYKRQLAEQEGMS 702
+ + + ER+ KEV+ Q E ++K L+ L++T +K K++L E +
Sbjct: 780 KERQEREENERRAKEVLEQAENERKLKEALEQKENERRLKETREKEE-NKKKLREAIELE 838
Query: 703 QQSVTRVRRFQR-ELE 747
++ + F+R E+E
Sbjct: 839 EKEKRLIEAFERAEIE 854
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Frame = +2
Query: 275 ELRIADER---YQRVQTELKHTVEHLHEEQERIVK----IEAVKKSLEIEVKNISVRLEE 433
ELR+ +E Y R+QTELK +E +QE + K ++A ++S E E + + R +
Sbjct: 475 ELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDERKAK 534
Query: 434 V 436
+
Sbjct: 535 I 535
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 31.9 bits (69), Expect = 0.46
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +2
Query: 275 ELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEA 442
ELR A E+ +R Q E K + L E+E+ K A+K+ IE + RL+ +EA
Sbjct: 4 ELRSAKEKLEREQRERKQRAK-LKLEREKKSKEAAIKQREAIEAAQRARRLDAIEA 58
>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +2
Query: 296 RYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIIS 475
R +R++ +L+ E ++E++ +IEA K+L E KN ++E +VG +R
Sbjct: 278 RLRRLELQLES--EKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRR--- 332
Query: 476 KLEARIKDMELS--WTKR 523
+A KD +L+ WT R
Sbjct: 333 --DAEAKDQKLADQWTSR 348
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVK-IEAVKKSLEIEVKNISVRLEEVEA 442
ITKE R+ + R+Q+ELK ++ + +E+E ++K E +K+ E K L++ A
Sbjct: 489 ITKEERV---EFLRLQSELKQQIDKVKQEEELLLKEREELKQDKERFEKEWEA-LDKKRA 544
Query: 443 NAIVGGKRIISKLEARIKDMELSWTKRRGDTLKPSRSSARRSVN 574
N I + +++ +++++++S R SR + +R ++
Sbjct: 545 N-ITREQNEVAEENEKLRNLQISEKHRLKREEMTSRDNLKRELD 587
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/64 (23%), Positives = 36/64 (56%)
Frame = +1
Query: 514 DEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAEQE 693
++++ A + KKE++ +E++ + E+D++N +D +EK K K++ +E
Sbjct: 381 EDDETEKAPVKRKKSKKEKRSREIVFEGEDDEEN----EDEIEKAPVKTKKSKKEKRSRE 436
Query: 694 GMSQ 705
+S+
Sbjct: 437 KVSE 440
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 311 QTELKHTVEH-LHEEQERIVKIEAVKKSLEIEVKNISVRLEEV-EANAIVGGKRIISKLE 484
++ L+ +H L EEQ R+ + + K+ LE ++ +S R EV E+ V KLE
Sbjct: 208 ESVLRQQEQHRLAEEQTRVASLMSEKQELEQKISVLSSRASEVSESGQKVFSVEDKEKLE 267
Query: 485 ARIKDMELS 511
++ DM ++
Sbjct: 268 KQLHDMAVA 276
>At3g12550.1 68416.m01562 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 332 VEHLHEEQERIVKIEAV---KKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEARIKDM 502
V+H + +RI +E K+ LE+EV+ + +L + + G I++K+E ++D+
Sbjct: 393 VDHKEKLHKRIAALERQLDQKQELELEVQQLKSQLSVMRLVELDSGSEIVNKVETFLRDL 452
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Frame = +1
Query: 478 ARGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQ-----KNISLLQDSLE 642
A+ H E + HAE +IL + +LK ++ EE + + +S L+ +E
Sbjct: 179 AKNKALSHAEEATKIAEIHAEKAEILASELGRLKALLGSKEEKEAIEGNEIVSKLKSEIE 238
Query: 643 KTS---QKVSIYKRQLAEQEGMSQQ 708
+KVSI + L EQEG+ +Q
Sbjct: 239 LLRGELEKVSILESSLKEQEGLVEQ 263
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 344 HEEQERIVKIEAVKKSLEIEV-KNISVRLE--EVEANAIVGGKRIISKLEARIKDMELSW 514
H+ +E + +++ + SLE V K ++ E E E NA++ K II +++IK +
Sbjct: 958 HKAREELERLQTDQSSLEKRVNKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEEL 1017
Query: 515 TKRRGDTLK 541
+++ +TLK
Sbjct: 1018 DEKKKETLK 1026
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 311 QTELKHTVEH-LHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEA 487
++ L+ +H L EEQ R+ + + K+ LE ++ +S R E+ V KLE
Sbjct: 208 ESVLRQQEQHRLAEEQTRVASLMSEKQELEQKISVLSSRASVSESGQKVFSVEDKEKLEK 267
Query: 488 RIKDMELS 511
++ DM ++
Sbjct: 268 QLHDMAVA 275
>At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family
protein similar to unknown protein (pir |B71406)
Length = 234
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 90 VEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAA 254
V ++RG ++ S++ + +E +T NEL L + K K+EQ+L + A
Sbjct: 119 VTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNA 173
>At5g20450.1 68418.m02431 expressed protein weak similarity to
myosin [Arabidopsis thaliana] GI:433663
Length = 341
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/98 (20%), Positives = 47/98 (47%)
Frame = +3
Query: 3 ARDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNE 182
AR ++ QV + + + SLT EVE ++ + + + + + E++ R +E
Sbjct: 26 ARKAIEEAPQV-IKENSEDTEKFNSLTSEVEALKASLQSERQAAEDLRNAFSEAEARNSE 84
Query: 183 LTVINVNLSSSKAKIEQELAIVAATTMRSPRNSASPMR 296
L NL + +++Q + + +++S + +A +R
Sbjct: 85 LA---TNLENVTRRVDQ---LCESASLQSEQQAAEDLR 116
>At4g12020.1 68417.m01912 protein kinase family protein similar to
mitogen-activated protein kinase [Arabidopsis thaliana]
GI:1255448; contains Pfam profiles PF02671: Paired
amphipathic helix repeat, PF03106: WRKY DNA-binding
domain, PF00560: Leucine Rich Repeat, PF00069: Protein
kinase domain, PF00931: NB-ARC domain
Length = 1798
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Frame = +3
Query: 57 AQRRIQ-SLTGEVEEI----RGNYEQALRVKRSVEQQYEESQTRVNELT--VINVNLSSS 215
++R+++ SL G+V EI R N+E + K S T +N ++ + SS+
Sbjct: 500 SKRKVERSLDGQVAEIVYKDRHNHEPPNQGKDGSTTYLSGSSTHINCMSSELTASQFSSN 559
Query: 216 KAKIEQELAIVAATTMRSPRNSASPMRDTS 305
K KIEQ+ A ATT+ ++ D++
Sbjct: 560 KTKIEQQEAASLATTIEYMSEASDNEEDSN 589
>At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein
contains Pfam profile PF00566: TBC domain
Length = 771
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 72 QSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQ 233
Q L G+V ++G + L+ KRS + EE + + E+ V N KAKIEQ
Sbjct: 585 QDLQGQVLWLKGELHKLLQEKRSALLRAEELEVALMEM-VKQDNRRQLKAKIEQ 637
>At1g77800.1 68414.m09059 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1423
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +1
Query: 412 HLCPSGRSRSQRYCWWQAYHQQARGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVII 591
H+ G+ + YC + Q+A+ Q HGAE E K + +L E +L+ + +
Sbjct: 1154 HMTGGGKHPHKAYCEKHSMEQKAKAESQKHGAE--ELKSLKHYRVGVL--SEVELERLRL 1209
Query: 592 QCEEDQKNISLLQDSLEKTSQKVSIYKRQLA 684
CE K L ++ L +S ++ KR A
Sbjct: 1210 LCERIVKREKLKRE-LAISSHEILAAKRDHA 1239
>At5g65440.1 68418.m08230 expressed protein
Length = 1050
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +3
Query: 9 DEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELT 188
DE+ +L TLD+Y + RR +E++ + E+A + ++E+Q+ E + + E
Sbjct: 764 DEMYERLNGTLDEYDIIIRRWPEYAISLEKVVADSEKA--IVEAMEKQFTEILSPLKESK 821
Query: 189 VINVNL 206
+ + +
Sbjct: 822 IFGLKI 827
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVE 439
+ KEL+ Q+ +TE K +E +E+ + K+E + K E+E ++ R +++E
Sbjct: 107 LDKELKPLGNTVQKKETEYKDALEAFNEKNKE--KVELITKLQELEGESEKFRFKKLE 162
>At2g33610.1 68415.m04119 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domain PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 469
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 134 ALSRAAIRGISDSRQRAD-CYQREPVKQQGXXXXXXXXXXXXXXEITKELR-IADERYQR 307
A +RAA+R +SD AD R+P +Q + + + ++
Sbjct: 343 AAARAAVRALSDVDYEADKNASRDPNRQDANAASSGETTRNESERAWADAKSLIEKEEHE 402
Query: 308 VQTELKHTVE-HLHEEQERIVKIEAVKKSLEIEVKNISVRLEEV 436
V+ +K TVE + + ++RIV E L++E++ +LEEV
Sbjct: 403 VEGAIKETVEVEMKKIRDRIVHFE----KLDLEMERSRKQLEEV 442
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVK-NISVRLEEVEA 442
+T+E+ + E + +E++ + E +E++ K+EA K LE EVK N + +E
Sbjct: 329 VTEEVVVPSEN--SLASEIEVLTSRIKELEEKLEKLEAEKHELENEVKCNREEAVVHIEN 386
Query: 443 NAIVGGKRIISKLEARIKDME 505
+ ++ + +LE +++ +E
Sbjct: 387 SEVLTSR--TKELEEKLEKLE 405
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVK-NISVRLEEVEA 442
+T+E+ + E + +E++ + E +E++ K+EA K LE EVK N + +E
Sbjct: 295 VTEEVVVPSEN--SLASEIEVLTSRIKELEEKLEKLEAEKHELENEVKCNREEAVVHIEN 352
Query: 443 NAIVGGKRIISKLEARIKDME 505
+ ++ + +LE +++ +E
Sbjct: 353 SEVLTSR--TKELEEKLEKLE 371
>At1g55250.1 68414.m06310 expressed protein weak similarity to PUMA1
[Parascaris univalens] GI:3068590
Length = 522
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 EVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEES-QTRVNELT 188
E Q+Q + + Q ++ L G++EEI+ E+ R +++ Q + + + V
Sbjct: 250 EHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDAACEGHVTSPA 309
Query: 189 VINVNLSSSK 218
+ N +LS K
Sbjct: 310 IANGSLSPEK 319
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/72 (25%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 18 QRQLQVTLDQ-YGVAQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVI 194
QR++ V L++ G ++SLT E E +RG Q + +++S+++ EE++ R ++ +
Sbjct: 275 QREMIVELEKKLGDMNEIVESLTKEREGLRG---QVVGLEKSLDEVTEEAKARAEQINEL 331
Query: 195 NVNLSSSKAKIE 230
+ ++++E
Sbjct: 332 VKEKTVKESELE 343
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Frame = +1
Query: 466 YHQQARGSHQGHGAELDEEKRRHAETIKILRKK---ERQLKEVIIQCE----EDQKNISL 624
+++ RG G G + D+E H +L K E++L + + Q E E QK +SL
Sbjct: 386 WNKSLRGISNGEGGKDDQESDEHETHATVLDKLLAWEKKLYDEVKQGELMKIEYQKKVSL 445
Query: 625 LQ---------DSLEKTSQKVS-IYKRQLAEQEGMSQQSVTRVRRFQ 735
L +++EKT VS ++ R + + + M +V+ V R +
Sbjct: 446 LNRHKKRGASAETVEKTKAAVSHLHTRYIVDMQSM-DSTVSEVNRLR 491
>At3g28370.1 68416.m03545 expressed protein
Length = 292
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 60 QRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIE--Q 233
++RI+ L EVE E+A R+K E++ + EL++ + + S +A+I Q
Sbjct: 32 KKRIEILQSEVEAANSEVEKAKRIKEVAEEELNGYEV---ELSLNDATIQSLEARISLLQ 88
Query: 234 ELAIVAATTMRSPRNSASPMRD 299
+ + + + +N +RD
Sbjct: 89 DEVTTIGSEVDALKNKEGLLRD 110
>At2g17990.1 68415.m02091 expressed protein
Length = 338
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +2
Query: 350 EQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEARIKDM 502
++ER + E I+++N+SV+LEE+E A G +++++ RI+++
Sbjct: 174 QKERALLGEEEISRKTIQIENLSVKLEEMERFA-YGTNSVLNEMRERIEEL 223
>At1g73360.1 68414.m08491 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
protodermal factor2 (GI:14276060) [Arabidopsis
thaliana]; similar to homeobox protein GI:1173621 from [
Phalaenopsis sp.]
Length = 722
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 484 GSHQGHGAELDEEKRR-HAETIKILRKKERQLKEVIIQCEEDQKNIS 621
GSH G+E D +K+R H T + +++ E KE E+ + +S
Sbjct: 20 GSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLS 66
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 508 ELDEEKRRHAET-IKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLA 684
+L EK E + L +KE+ + E +E +KN+ ++ + + + + K +L
Sbjct: 427 DLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLR 486
Query: 685 EQEGMSQQSVTRVRRFQRELE 747
+ + QQS+T + ++ ++
Sbjct: 487 KLDLELQQSLTSLEDKRKRVD 507
>At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing
protein similar to zinc finger protein OBP4 gi:5059396
from [Arabidopsis thaliana]; EMBL:AF155817
Length = 307
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 349 GTGEDRQDRGRQEVS*NRSQEHLCPSGRSRSQRYCWWQAYH 471
G G DR+ R Q N Q CP S + ++C++ Y+
Sbjct: 30 GGGGDRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYN 70
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 358 EDRQDRGRQEVS*NRSQEHLCPSGRSRSQRYCWWQAYHQQARGSHQGHGAELDEEKRRHA 537
++RQ + R+EV +E R R + + +Q + + + +EE R+
Sbjct: 581 QERQRKEREEVERKIREEQ----ERKREEEMAKRREQERQKKEREEMERKKREEEARKRE 636
Query: 538 ETIKILRKKERQLKE 582
E + +R++ERQ KE
Sbjct: 637 EEMAKIREEERQRKE 651
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +1
Query: 508 ELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 687
E+D +KR + L ++ + LKE I +++Q ++ L + E + K+ + E
Sbjct: 711 EIDNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLEKTKKSVME 770
Query: 688 QEGMSQQ 708
E Q+
Sbjct: 771 AEASLQR 777
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 28.7 bits (61), Expect = 4.3
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 263 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVK-IEAVKKSLEIEVKNISVRLEEVE 439
EI KE R E Y R+Q+ELK +E +E + K +E +K+ E K + L+E +
Sbjct: 510 EIKKEER---EEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI-LDEKQ 565
Query: 440 ANAIVGGKRI-ISKLEARIKDMELSWTKRRGDTLKPSRSSAR 562
A+ +RI IS+ + + + +L G+ LK S+ R
Sbjct: 566 --AVYNKERIRISEEKEKFERFQL----LEGERLKKEESALR 601
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +1
Query: 469 HQQARGSHQGHGAELDEEKRRHAETIKILRKKERQL---KEVIIQCEEDQKNIS---LLQ 630
H++ + SH + + +H+E L+K + +L K VI+ E + L
Sbjct: 649 HKELQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKVKLA 708
Query: 631 DSLEKTS--QKVSIYKRQLAEQEGMSQQSVTRVRRFQREL 744
D+ K S + I+K L E E ++ V+ +L
Sbjct: 709 DAKSKVSHIKHNHIFKPNLQETESTGKEEEVEVKSRDSDL 748
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 263 EITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEE 433
E+ ++L+I+DERY + L + ++++ +E + + + E+K+ + EE
Sbjct: 126 ELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSLEELSEKVS-ELKSALIVAEE 181
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +2
Query: 347 EEQERIVKIEAVKKSLEIEVKNISVRLEEVEANA---IVGGKRIISK-LEARIKDME 505
E QE+ ++ ++++ L++E+K + RLEE EA GG ++ + E ++ D+E
Sbjct: 539 EFQEKEIEHCSLQEKLDMELKELDKRLEEKEAEMKRFSSGGTSVLKQHYEKKVYDLE 595
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +1
Query: 427 GRSRSQRYCWWQAYHQQARGSHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEED 606
G+ + + +AY G G E +EK E K R LKE + E
Sbjct: 1335 GKRLRKAVSYREAYAPHTSGPVNESGGE--DEKEPEPELKKEYTPAGRALKEKFTKLRER 1392
Query: 607 QKNISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQSVT 717
QKN+ ++S+E++ ++ Q+ E ++S T
Sbjct: 1393 QKNLIARRNSVEESLPSGNV--DQVTEVANQDEESPT 1427
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 517 EEKRRHAETIKILRKKERQLKEVIIQCEEDQKNI 618
EEK + E K L K+++QL+E Q EE++K +
Sbjct: 55 EEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQL 88
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/84 (20%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Frame = +1
Query: 460 QAYHQQARGSHQGHGAELDEEKRRHAETIKILR----KKERQLKEVIIQ--------CEE 603
Q ++QQ G H+ AEL+ ++ + E +++ K E ++++ ++ CE+
Sbjct: 225 QEFYQQVLGGHEKSFAELEAKREKLDERARLIEQRAIKNEEEMEKTRLEREMIQKAMCEQ 284
Query: 604 DQKNISLLQDSLEKTSQKVSIYKR 675
++ N ++ + + +K ++KR
Sbjct: 285 NEANEEAMKLAEKHQKEKEKLHKR 308
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 490 HQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQ--CEEDQKNISLLQDSLEKTSQKVS 663
H E+D+E H E K K + + KE +I CE++ K+ D +T QK +
Sbjct: 307 HDATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKD---KDDDEGETKQKKN 363
Query: 664 IYKRQLAEQ 690
K + +E+
Sbjct: 364 KKKEKKSEK 372
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +3
Query: 66 RIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNEL 185
+I SLT EVE ++ + + + ++ + + E++ R +EL
Sbjct: 988 KINSLTSEVEALKASLQAERQAAENLRKAFSEAEARNSEL 1027
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 344 HEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANAIVGGKRIISKLEA--RIKDMELSWT 517
H+E+ I + E +K+++I+ N+S+RLE+ E + + + + L A + D LS +
Sbjct: 121 HKEKVIICEEEITRKTVQIQ--NLSLRLEQTERIVMTECESLKNALTASNNVLDTLLSSS 178
Query: 518 KRRGDTLK 541
+R T++
Sbjct: 179 RRHFQTIE 186
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 493 QGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKN 615
Q + EL+EE + E +++ + +LKE +++ E++ KN
Sbjct: 587 QTNRKELEEEIKDLQEIVEVAKADSMKLKESLVEKEDELKN 627
>At3g28350.1 68416.m03543 hypothetical protein
Length = 290
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 60 QRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYE--ESQTRVNELTVINVNLSSSK 218
++RI+ L EVE E A R+K E++ E + +N+ T+ ++ + K
Sbjct: 32 KKRIEILQSEVEAANSEVEHAKRIKEVAEEELNGYEVELSLNDSTIQSLEVMFGK 86
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +2
Query: 272 KELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRL-------E 430
KEL A E+ ++V+ E + +R+ K + KSL+ +K ++ L E
Sbjct: 230 KELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDSKSLDESLKELTKELQTLYKEKE 289
Query: 431 EVEANAIVGGKRIISKLEARIKDME 505
VEA K+ +KLE +KD +
Sbjct: 290 TVEAQQTKALKK-KTKLELDVKDFQ 313
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 511 LDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNI-SLLQDSLEKTSQKVSIYKRQLAE 687
L + ++ E K ++ ERQ+ + +Q E++QK + + D K ++ KR + +
Sbjct: 249 LKQLEKNRCEAEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETESRKR-IKK 307
Query: 688 QEGMSQQSVTRVRRFQRELE 747
Q+ S++ R + Q EL+
Sbjct: 308 QQDESEKEQKRREKEQAELK 327
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 266 ITKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLE 430
+ E+RI E QR +L+ E + E QE+I + K L V NI LE
Sbjct: 31 LANEIRILKEESQRTNLDLESVKEKIKENQEKI----KLNKQLPYLVGNIVEILE 81
>At5g66560.1 68418.m08391 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 668
Score = 27.5 bits (58), Expect = 10.0
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 84 GEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAKIEQELAIVAATTM 263
GE + G +++ +R + + + +TRV+ L N+ AKI++E + A TT
Sbjct: 574 GERQVDAGKWKKTVRENQVLRLDMDTMRTRVHRLERECSNMKKVIAKIDKEGSSPATTTD 633
Query: 264 RSPRN 278
R PR+
Sbjct: 634 R-PRS 637
>At5g19960.1 68418.m02376 RNA recognition motif (RRM)-containing
protein low similarity to glycine-rich RNA-binding
protein [Euphorbia esula] GI:2645699; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) (RRM) domain
Length = 337
Score = 27.5 bits (58), Expect = 10.0
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 523 KRRHAETIKILRKKER-QLKEVIIQCEEDQKNISLLQDSLEKTSQKVSIYKRQLAE 687
K R A +++ +ER ++KEV+ C E QK L+D L + VS +++LA+
Sbjct: 238 KMREALRDEVMVMEERLEVKEVV--CSELQKKSKRLEDLLINEKKLVSQRRKELAK 291
>At5g08630.1 68418.m01026 DDT domain-containing protein low
similarity to SP|Q9NRL2 Bromodomain adjacent to zinc
finger domain protein 1A (ATP-utilizing chromatin
assembly and remodeling factor 1) (ATP-dependent
chromatin remodelling protein) (Williams syndrome
transcription factor-related chromatin remodeling factor
180) {Homo sapiens}; contains Pfam profile PF02791: DDT
domain
Length = 723
Score = 27.5 bits (58), Expect = 10.0
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 553 LRKKERQLKEVIIQCEEDQKNISLLQDSLEK-TSQKVSIYKRQLAEQEGMSQQSVTRVRR 729
LRK +RQ+ + I+ +E++++ +D EK S K K +++G ++ RR
Sbjct: 532 LRKHKRQMTDTKIEPKEEEEDEKAEEDEEEKGFSVKKQEVKSASEDEKGTFERRGPEQRR 591
Query: 730 --FQRELE 747
++RE+E
Sbjct: 592 QYYEREME 599
>At4g13980.1 68417.m02162 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 466
Score = 27.5 bits (58), Expect = 10.0
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Frame = +1
Query: 352 TGEDRQDRGRQEVS*NRSQEHLCPSGRSRSQRYCWWQAY---------HQQARGSHQGHG 504
T ++RGRQE++ SQ + P R +W+ + +++A +++G+
Sbjct: 385 TSASEKNRGRQEIAVGGSQANAAPPARVND---VFWEQFLTERPGSSDNEEASSTYRGNP 441
Query: 505 AELDEEKRRHAETIKILRKKER 570
E EEKR + ++ + E+
Sbjct: 442 YEEQEEKRNGSMMLRNTKNIEQ 463
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/78 (17%), Positives = 43/78 (55%)
Frame = +2
Query: 269 TKELRIADERYQRVQTELKHTVEHLHEEQERIVKIEAVKKSLEIEVKNISVRLEEVEANA 448
T+ ++++++ QR + EL + L + +++ +++E+EV+ + +L ++ A
Sbjct: 213 TERMKLSEDLEQRQKEELHEKIIRLERQIDQV-------QAIELEVEQLKGQLNVMKHMA 265
Query: 449 IVGGKRIISKLEARIKDM 502
G +++ +++ KD+
Sbjct: 266 SDGDAQVVKEVDIIFKDL 283
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 27.5 bits (58), Expect = 10.0
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 487 SHQGHGAELDEEKRRHAETIKILRKKERQLKEVIIQCEEDQKNISLLQDSL-EKTSQKVS 663
S+ G +LD +R E + R+ + + + C+E K I L+D + E+ ++ S
Sbjct: 495 SYAGATEDLDFLRRNFEEKDQECRELHKSVTKFFRTCKEQGKTIEGLRDGVSEEVKKQPS 554
Query: 664 IYKRQLAEQEGMSQQSVTRVR-RFQRELE 747
QL ++ + Q +T + +RE+E
Sbjct: 555 EKLDQLVKKLQVEQVRLTGIELSLRREVE 583
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 27.5 bits (58), Expect = 10.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 57 AQRRIQSLTGEVEEIRGNYEQALRVKRSVEQQYEESQTRVNELTVINVNLSSSKAK 224
A++RIQ L + +E+R + K + E+ +E + VN L ++L+++ K
Sbjct: 1529 AKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILHLTTTAEK 1584
>At2g23070.1 68415.m02750 casein kinase II alpha chain, putative
similar to casein kinase II, alpha chain (CK II) [Zea
mays] SWISS-PROT:P28523; contains protein kinase domain,
Pfam:PF00069
Length = 432
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 616 ISLLQDSLEKTSQKVSIYKRQLAEQEGMSQQ 708
+S LQD+L + + S+Y++ L Q+ QQ
Sbjct: 42 LSSLQDNLRRFASSASLYRQHLRNQQQQHQQ 72
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 YQRVQTELKHTVEHLHEEQERIVKIEAV--KKSLEIEVKNISVRLEEVEANAIV 454
+ + E+ H+V EEQE I ++EA+ +++ IE R EE+ AN ++
Sbjct: 307 FDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLL 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,592
Number of Sequences: 28952
Number of extensions: 268914
Number of successful extensions: 1413
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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