Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0405
(612 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 39 0.004
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.011
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.026
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.026
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 35 0.045
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.045
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 34 0.079
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.14
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 33 0.14
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.32
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.42
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.42
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.56
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.56
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 0.74
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 0.74
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.74
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 31 0.97
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.3
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 30 1.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 30 1.7
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 30 1.7
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 30 1.7
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_44522| Best HMM Match : Ank (HMM E-Value=0) 29 3.0
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 29 3.9
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.9
SB_32794| Best HMM Match : Gam (HMM E-Value=5.8) 28 5.2
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 28 5.2
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 28 6.9
SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 27 9.1
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 486
V RII H NY+ T D D +L+ + + V+P+ + +++ G + + GWG+T
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAG--TLCYVTGWGST 428
Query: 487 SLGGSNSGN 513
+ GS S N
Sbjct: 429 NYRGSPSPN 437
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 486
V RII H NY+ T D D +L+ + + V+P+ + +++ G + + GWG+T
Sbjct: 620 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAG--TLCYVTGWGST 677
Query: 487 SLGGSNSGN 513
+ GS S N
Sbjct: 678 NYRGSPSPN 686
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 89 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
I+GG+ ++P ++ N + CGGN+++ +L+AAHC
Sbjct: 546 IMGGANAEHGEWPWQVSMKL--NSSSLPHICGGNVISPWWVLTAAHC 590
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 304 NVNRIIIHPNYN-RRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 480
+V RII+HP Y D D+ +++ S + YN+ VRP+ + +L +N + +GWG
Sbjct: 181 DVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWG 240
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNW-NQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ +P ++ Y N + CGG+++ I++AAHC
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC 151
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 486
V ++I+HPNY R+T DSD+ +LR + N V I + + + + GWG T
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGRT 1464
Query: 487 SLGGSNSGNSV 519
G + G SV
Sbjct: 1465 --GYNRPGASV 1473
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +1
Query: 304 NVNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 480
+V RII+HP Y TA ++D+ +++ N N V + L D ++ +A GWG
Sbjct: 426 SVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSDGKICYATGWG 485
Query: 481 ATSLGGSNSGNSVTSRSGPSI--RMPASNVTDPLTVLSPLTC 600
T G S + V ++ + R D + + + + C
Sbjct: 486 LTVGGDWKSQSDVLKQTPLPVVNRQECQTDYDDIPITTAMMC 527
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RII GS N +P + + N+N CGG +++ + +++AAHC
Sbjct: 351 RIISGSDAQPNSWPWMVQI----NYNNG-HHCGGTLVSPQWVVTAAHC 393
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 307 VNRIIIHPNYNRR-TADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 483
V+++I+HP+Y + T D+ +L+ + NNNV + + D W GWG
Sbjct: 187 VSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLPFNGPAPSDCTHCWITGWGH 246
Query: 484 TSLGGSNSGNSVTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 609
+ GG ++ + + S P + + P + S + C L
Sbjct: 247 LASGG-DTPDLLQQASVPIVSRSRCDKAYPGKIDSSMLCAGL 287
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 241
RI+GG+ IN +P A LL + N +Q+ CGG++++ +L+AAHC G+
Sbjct: 29 RIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVGE 77
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 304 NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 483
++ I +HP YN + + DL +L+ +N+ V PI I AN + + AGWG
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIV-ANEEVQAGRACAVAGWGQ 1370
Query: 484 TSL 492
+ L
Sbjct: 1371 SYL 1373
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 268 GSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AGANYN 441
G+ + G +++I HP ++ TAD D+ ILR ++ + ++V I + GA +
Sbjct: 21 GAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQGARAS 80
Query: 442 LGDNQVVWAAGWG 480
LG N + +GWG
Sbjct: 81 LGGN--CFISGWG 91
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATG 250
RI+GG+T +P A L Y +N N + CGG +++ R +++A+HC + TG
Sbjct: 248 RIVGGTTAQRGAWPWQAMLRY-YNGNHF---CGGTLVHPRWVVTASHCVHKLTTG 298
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 483
+ RI +HPNY+ +D+ +L + + +A + L D W +GWG
Sbjct: 321 IQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPDGTRCWISGWGR 380
Query: 484 TSLGGSN 504
S GG++
Sbjct: 381 LSSGGAS 387
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGA--NYNLGD-NQVVWAAG 474
V++I+ H +YN S D+ +++ + N V + + L D NQ W G
Sbjct: 21 VSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWITG 80
Query: 475 WGATSLGGSNSGNSVTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 609
WG + GG N N + S P + N P + + C L
Sbjct: 81 WGTLASGG-NQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGL 124
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 259 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGA--NYNLGD-NQVVWAAG 474
V++I+ H +YN S D+ +++ + N V + + L D NQ W G
Sbjct: 365 VSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWITG 424
Query: 475 WGATSLGGSNSGNSVTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 609
WG + GG N N + S P + N P + + C L
Sbjct: 425 WGTLASGG-NQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGL 468
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 219 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 262
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +1
Query: 322 IHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AGANY-NLGDNQVVWAAGWGATSL 492
IHP+Y+ + DSD+ ++R + + + V+PI + A ++Y L N +GWG L
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKL 257
Query: 493 GGSNSGNSVTSRSGPSIRMPASNVTDPLTVLSPLTCCA 606
N + + P + + P +++ CA
Sbjct: 258 WRDRVANRLHEATVPIVDIQTCRKAHPDYIVTANMFCA 295
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 235
RIIGG+T + +P A +L + W CGG +++ +++AAHC +
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVD-KSWNHRCGGTLIDTEWVVTAAHCVF 332
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 71 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC--PY 235
P +R++GG Q+P ALL+ Q CGG ++++R +++ AHC PY
Sbjct: 23 PRRFRRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHCFNPY 74
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 358 DLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGS 501
D+ ++ + + +N +V+PI I N + N + +GWG T GS
Sbjct: 128 DIALIELDRPVVFNFHVQPICIMRPNISFKWNTACFISGWGHTRWNGS 175
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GGST +P L+Y N Q CGG ++ +++AAHC
Sbjct: 630 RIVGGSTAPPGAWPWQVMLIY----NSGRQFCGGTLVTPEWVITAAHC 673
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 304 NVNRIIIHPNYNR-RTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 480
++ I HP+Y + + +D+ +LR + + + + + + + + GWG
Sbjct: 703 SIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWG 762
Query: 481 ATSLGGS 501
S GGS
Sbjct: 763 TLSSGGS 769
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 86 RIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 235
RI+GG+ +P + + + NQ Q CGG ++N+ +L+AAHC Y
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQM-QICGGALINREWVLTAAHCFY 175
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
+RI+GG + I Q+P + A++ Q+CGG+++ + I++AAHC
Sbjct: 39 RRIMGGQRSTIEQHPWMVAMMLDSA-----QACGGSLVPEDWIVTAAHC 82
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 RIRVGSTFANSGGVVHNVNRIIIHPNYNRRTA-------DSDLCILRSNSNIAYNNNVRP 414
R+ G+ + V+ I HP Y A D D+ +++ ++A P
Sbjct: 91 RVVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVP 150
Query: 415 INIAGANYNLGDNQVVWAAGWGATSLGGSNS 507
I + + + + AGWG S GG S
Sbjct: 151 ICLVPRDTPRDLKRDCYVAGWGRRSFGGEQS 181
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 74 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
++ RI+GG+ N +P A L T + CGG++++ +L+AAHC
Sbjct: 386 SSTSRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGSLIHSNWVLTAAHC 433
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILR 375
V+ II H NYN RT +D+ +L+
Sbjct: 464 VSAIITHSNYNSRTMYNDIALLK 486
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 71 PTNPQR--IIGGSTTNINQYPGIAALLY-TWNWNQWWQSCGGNILNQRSILSAAHC 229
PTN +R I GGS + YP AL + T+ N CGG ++ + +L+AAHC
Sbjct: 1153 PTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 513 LRHVQVWTINQNACVQRYRPINRAITANMLCSG 611
L+ V +N NAC + Y +T+NMLC+G
Sbjct: 1314 LKEAIVPVVNHNACKKAYENETWPVTSNMLCAG 1346
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 316 IIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 417
I HP ++ RT DSD+ ++R VRP+
Sbjct: 1247 IYSHPRFSWRTYDSDIALIRLRWKANITEYVRPV 1280
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYG 238
RI+GG+ N +P A L T + CGG++++ + IL+A HC G
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRTT----SGFPYCGGSLIHPQWILTATHCVSG 99
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 283 NSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVV 462
N+ ++ N N III+ N N I+ +N+ I NNN+ INI N N+ N ++
Sbjct: 394 NNNNIIINNNNIIINNNINNNNI-----IINNNNIIIINNNIININIIINNNNIIINNII 448
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG T + +P A L + CGG+++N+ +++AAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTI---VCGGSLINREWVVTAAHC 476
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 74 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
T +RI+GG + +P AAL N CGG+++ + +++AAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL----NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
Q+I+GG T +P + Y CGG+I+N + I++AAHC
Sbjct: 1781 QQIVGGKVTEHGAWPWQVQIGY----KTMGHICGGSIVNSQWIVTAAHC 1825
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 486
+ I++HP+YN D D+ +L+ I +N V + + A G + +GWG
Sbjct: 1865 IEGIVVHPSYN--DLDYDIALLKLRQPITFNAYVSQVCLPQAALLAG--TPCYVSGWG-- 1918
Query: 487 SLGGSNSGNSV 519
+G S+ G++V
Sbjct: 1919 RIGESSPGSNV 1929
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 304 NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 444
NV ++I HP YN +D+ ++ S ++ V P+ + Y L
Sbjct: 548 NVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCLPPHGYKL 594
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 71 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
P R+IGG +P AL N+ CGG++++ +++AAHC
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIALKSRGNF-----ICGGSLVSSTWVVTAAHC 518
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 235
RI+GG+ +P A L N Q CGG +++ + +++AAHC Y
Sbjct: 139 RIVGGTKAPPGAWPWQAML----RSNYGGQFCGGTLVHPQWVITAAHCVY 184
Score = 31.9 bits (69), Expect = 0.42
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = +1
Query: 256 RIRVGSTFANSG-GVVHN--VNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINI 423
+IR+G+ F G + ++R+I HP+Y++ T + D+ ++ N V +
Sbjct: 192 KIRMGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAVGLACL 251
Query: 424 AGANYNLGDNQVVWAAG---WGATSLGGSNSGNSVTSRSG 534
A ++ + D + W G G S G + G V +G
Sbjct: 252 ADPSFPIDDGKKCWVTGLDEGGIDSCQGDSGGPMVCENNG 291
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 298 VHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYN---LGDNQVVWA 468
+ N++ I HP ++ D+DL +++ + + VRPI + + + ++ A
Sbjct: 182 LRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMA 241
Query: 469 AGWGAT 486
GWG T
Sbjct: 242 VGWGKT 247
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
QRI+GG T YP + + +CGG++++++ +L+AAHC
Sbjct: 106 QRIVGGHDTVKGAYPWHVLIRKGGH-----VACGGSLISEKWVLTAAHC 149
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 241
RI+GG +P +AA+ ++ CGG ++ + +++AAHC Y D
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVKGSFR-----CGGALIARDWVVTAAHCFYYD 769
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +1
Query: 301 HNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLG 447
H+V RII HP YN +D+ ++ +S + ++ +++ + G
Sbjct: 138 HDVKRIITHPTYNSPQLSNDIALIELSSPVPLSDRGHQVSVGSKCFITG 186
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ +P A L T + CGG++++ + +L+A HC
Sbjct: 663 RIVGGTAAKQGDWPWQAQLRST----SGFPFCGGSLIHPQWVLTATHC 706
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 307 VNRIIIHPNYNR--RTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 480
+ +I +H +YN ++D+ ++R V+P+ +A + W GWG
Sbjct: 289 IAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWG 348
Query: 481 ATSLGGSN 504
GG++
Sbjct: 349 RLHSGGAS 356
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ ++P A L++ + Q CGG ++++ +++A+HC
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLG-YKQFCGGALVHEDWVVTASHC 256
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = +2
Query: 128 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHCPYGD 241
G ALL W W W CGG+++ +L+AAHC D
Sbjct: 35 GSEALLGEWPWQAWLHLQHTGFICGGSLVAPGWVLTAAHCILSD 78
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
+RI+GG +P ALL Q CGG+++N+ +++A HC
Sbjct: 52 KRIVGGVEAAPGAWPWQVALLMNGT-----QFCGGSLVNENWVVTARHC 95
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 235
+R++ GS +P LL + + + CGG ++++ +++AAHC +
Sbjct: 42 KRVVSGSEVEPQSWPWQVHLLQSRD-GSFLHKCGGALIDREWVVTAAHCVF 91
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYG 238
R+I G + +P +L + CGG++++ +L+AAHC G
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAG 87
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 71 PTNPQRIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
P RI+GG N +P + +L T N + CGG++++ IL+++HC
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLTTHY--CGGSLIDPYWILTSSHC 291
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +2
Query: 128 GIAALLYTWNWNQW-----WQSCGGNILNQRSILSAAHC 229
G AA Y+W W SCGG +++ + +++AAHC
Sbjct: 480 GEAARPYSWPWQVSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 PQ-RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
PQ RI+GG + N +P L+ N +CGG++++++ ++++ HC
Sbjct: 246 PQPRIVGGREASPNSWPWQVDLVV----NGTRHNCGGSLIDKQWVVTSGHC 292
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ N +P A L + CGG +++ R +++A+HC
Sbjct: 23 RIVGGTAAPKNAWPWQAQLRSA----SGFPFCGGTLVHPRFVVTASHC 66
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RII G + +P +L + +CGG++++ R +++AAHC
Sbjct: 105 RIINGQNAQPHSWPWQISL----RGRSGFHTCGGSLISDRWVVTAAHC 148
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 483
+++II HP YN R +D+ +L + + +++ + + + + + GWGA
Sbjct: 508 LSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGA 566
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 89 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
IIGG+ + ++P +L T + CGG +L +L+AA C
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLT----HYGPVCGGTLLTSEWVLTAARC 300
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
RI+GG+ +P A L T + CGG+++ + IL+A HC
Sbjct: 10 RIVGGTAAKHGDWPWQAQLRTT----SGFPYCGGSLIAPQWILTATHC 53
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 83 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 229
+RI+GG ++ +P ALL Q C G+++ R I++A HC
Sbjct: 52 KRIVGGVVSSEGLWPWQVALLLNDR-----QVCAGSLIEARWIITAGHC 95
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/68 (19%), Positives = 31/68 (45%)
Frame = +1
Query: 307 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 486
+ ++ H ++ R +D+ +L+ + + ++ V + + + + GWG T
Sbjct: 104 LKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRT 163
Query: 487 SLGGSNSG 510
GGS +G
Sbjct: 164 VGGGSAAG 171
>SB_44522| Best HMM Match : Ank (HMM E-Value=0)
Length = 275
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 364 CILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSGNSVT 522
C + +S + NN+V+ ++G++ G+N V G++ L G+NS T
Sbjct: 115 CAVSGSSVLFGNNSVQDCTVSGSSVLFGNNSVQDCTVLGSSVLFGNNSVQDCT 167
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 71 PTNPQRIIGGSTTNINQYPGIAALLYTW 154
PTN RI+G S T Q+ G A L TW
Sbjct: 520 PTNATRIVGESHTVTCQFQGSPAPLVTW 547
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 460 VWAAGWGATSLGGSNSGNSVTSRSGPSIRMPASNVTDP 573
V A WGA + S N +S +G SI PA +++DP
Sbjct: 268 VAADPWGAPAPVSSAGSNPWSSTNGQSIIAPAVSISDP 305
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 28.7 bits (61), Expect = 3.9
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +2
Query: 170 WQSCGGNILNQRSILSAAHC 229
+ SCGG +++ R +++A+HC
Sbjct: 53 YHSCGGTLISDRWVVTASHC 72
>SB_32794| Best HMM Match : Gam (HMM E-Value=5.8)
Length = 511
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 530 DLDVTELPELDPPSDVAPQPAAQTTWLSPRL 438
D++V + L P VA P+A +W+SPRL
Sbjct: 169 DVEVLQSEGLFPTLAVAASPSAWYSWVSPRL 199
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/92 (21%), Positives = 38/92 (41%)
Frame = +1
Query: 331 NYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSG 510
N NR + S SN+N NNN+ + + +N N N +++ +++
Sbjct: 120 NSNRNSNSSSNSNSNSNNNSNSNNNINSNSNSNSNSNSNSNSNNNINSNSNSNINSNSNS 179
Query: 511 NSVTSRSGPSIRMPASNVTDPLTVLSPLTCCA 606
NS ++ + + T TV + +T A
Sbjct: 180 NSNSNSNSTVTATVTATATATATVTATVTAAA 211
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -1
Query: 483 STPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAE-VTVSSTSVIVGMNDNSVH 307
+TPT SP+ T V T +N T ++ S G T+ E + V++T +I + +
Sbjct: 589 ATPTISPSPNGTTSSVYETIAVNATPIISPSPNGTTSSVYETIAVNATPIISPSPNGTTS 648
Query: 306 VMHNTPTV-GKGGTNTNTQRPVASPY 232
++ T V + +T +SPY
Sbjct: 649 SVYETIAVNATPSISLSTNETASSPY 674
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 483 STPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAE-VTVSSTSVIVGMNDNSVH 307
STP+ SP+ T V T +N T + +S G T+ E + V++T I + +
Sbjct: 704 STPSISPSPNGTTSSVYETIAVNATPTISLSPNGTTSSVYETIAVNATPTISPSPNGTTS 763
Query: 306 VMHNTPTV-GKGGTNTNTQRPVASPY 232
++ T V + +T +SPY
Sbjct: 764 SVYETIAVNATPSISLSTNETASSPY 789
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 86 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 241
RII G + +P +L + + CGG +++ R +++A+HC + D
Sbjct: 845 RIINGQNAQPHSWPWQISL----RQGRRFHLCGGALISDRWVVTASHCIHDD 892
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Frame = +2
Query: 128 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHC 229
G A L W W W CGG+++ + +L+A HC
Sbjct: 65 GDDATLGEWPWQAWLHVTPHGFVCGGSLIAPQWVLTAGHC 104
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 403 NVRPINIAGANYNLGDNQVVWAAGWGATSLGGS 501
N+ P+ + + D + W GWG S GGS
Sbjct: 7 NIHPVCLPELDPEPVDGKHCWVTGWGRLSSGGS 39
>SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 232 WTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGILVNVGRGATN-NPLWVGRNSRHS 56
WT+ GTK + D T C+ + G+L++ G + WV RHS
Sbjct: 33 WTMPGTKVKVTRSDDPTHTPLLVTTGDCLGGKTMRGLLMSFGNTRRDGTDSWVSDQCRHS 92
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 179 CGGNILNQRSILSAAHC 229
CGG++L+ +L+AAHC
Sbjct: 340 CGGSLLSSTWVLTAAHC 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,637,903
Number of Sequences: 59808
Number of extensions: 486232
Number of successful extensions: 1512
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -