Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0402
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4ST17 Cluster: Chromosome undetermined SCAF14323, whol...    37   0.31 
UniRef50_Q7PX82 Cluster: ENSANGP00000013864; n=1; Anopheles gamb...    37   0.31 
UniRef50_A7H764 Cluster: Putative uncharacterized protein; n=1; ...    36   0.55 
UniRef50_Q0RHR5 Cluster: Putative Proline-rich extensin-like pro...    35   1.7  
UniRef50_Q24180 Cluster: Deformed epidermal autoregulatory facto...    35   1.7  
UniRef50_Q9X863 Cluster: Putative integral membrane efflux prote...    33   3.9  
UniRef50_A7PMV8 Cluster: Chromosome chr14 scaffold_21, whole gen...    33   5.1  
UniRef50_A5K8K0 Cluster: Putative uncharacterized protein; n=2; ...    33   5.1  
UniRef50_Q8RGC8 Cluster: Fe(3+) ions import ATP-binding protein ...    33   5.1  
UniRef50_UPI0000F211D6 Cluster: PREDICTED: hypothetical protein;...    33   6.7  
UniRef50_O86336 Cluster: BETA LACTAMASE LIKE PROTEIN; n=19; Myco...    33   6.7  
UniRef50_UPI00004F6724 Cluster: protocadherin 1 gamma 1; n=3; Da...    32   8.9  
UniRef50_Q11DU5 Cluster: Cobalamin synthesis protein, P47K; n=1;...    32   8.9  
UniRef50_A6ELB0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q4ST17 Cluster: Chromosome undetermined SCAF14323, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14323,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 323

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +3

Query: 255 DADH-SNRHHHGHRDRLPLLFRSI-ISG-CNGSGSESAGSLRSGSGQ 386
           D DH  + HHH H  +  LL  SI ++G CN + S S G+   GSGQ
Sbjct: 90  DDDHLHHNHHHHHHHQSSLLHSSIKMNGNCNNNSSNSTGNHSGGSGQ 136


>UniRef50_Q7PX82 Cluster: ENSANGP00000013864; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013864 - Anopheles gambiae
           str. PEST
          Length = 168

 Score = 37.1 bits (82), Expect = 0.31
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 264 HSNRHHHGHRDRLPLLFRSIISGCNGSGSESAGSLRSGSGQGPV 395
           H+N HHH H    P     +++G + S S S+ S  S +G  P+
Sbjct: 71  HNNHHHHHHHHLHPQHLMGVMAGASSSSSNSSNSNGSSNGSFPI 114


>UniRef50_A7H764 Cluster: Putative uncharacterized protein; n=1;
           Anaeromyxobacter sp. Fw109-5|Rep: Putative
           uncharacterized protein - Anaeromyxobacter sp. Fw109-5
          Length = 149

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 451 RRSTRCANPRLTALSIDRSTGPCPEPDR 368
           RR T C N R  A+  D S GP P+PDR
Sbjct: 53  RRHTTCPNARAVAVGCDESRGPDPDPDR 80


>UniRef50_Q0RHR5 Cluster: Putative Proline-rich extensin-like
           protein; n=1; Frankia alni ACN14a|Rep: Putative
           Proline-rich extensin-like protein - Frankia alni
           (strain ACN14a)
          Length = 441

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 421 LTALSIDRSTGPCPEPDRKDPALSLPEPLHP 329
           +  L++D   GP PEPDR DP ++ P+   P
Sbjct: 222 VVVLAVDVLDGPVPEPDRADPGVAAPDSAGP 252


>UniRef50_Q24180 Cluster: Deformed epidermal autoregulatory factor
           1; n=3; Sophophora|Rep: Deformed epidermal
           autoregulatory factor 1 - Drosophila melanogaster (Fruit
           fly)
          Length = 576

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +3

Query: 261 DHSNRHHHGHRDRLPLLFRSIISGCN---GSGSESAGSLRSGSGQG 389
           + S+ HHH H  +L    R + S  N   GSG  S G+  +G G G
Sbjct: 32  ESSSHHHHHHHHQLDTKVRMVTSSSNDNSGSGGASGGTSGAGGGNG 77


>UniRef50_Q9X863 Cluster: Putative integral membrane efflux protein;
           n=3; Streptomyces|Rep: Putative integral membrane efflux
           protein - Streptomyces coelicolor
          Length = 500

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -3

Query: 493 KSVMLFVGGGLS---TSRRSTRCANPRLTALSIDRSTGPCPEPDRKDPALSLPEPLHPLM 323
           ++V++F G G +    SRR+ R    R   LS +  TG  P PD +D   +L  P  PL+
Sbjct: 20  RTVVVFGGAGAAHRNNSRRTRRTTTRRRARLSTEPGTGSAPTPDTRDSFGTL-SPRAPLL 78


>UniRef50_A7PMV8 Cluster: Chromosome chr14 scaffold_21, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_21, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 323

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
 Frame = +3

Query: 249 VVDADHSNRHHHGHRDRLPLLFRSIISGCNGSGSESAGSLRSGSGQ---GPVLRSID--- 410
           V+     + HHH H    P +  +         +   G    G G+    P   S D   
Sbjct: 49  VLKRHQQHHHHHHHHFAAPQVVVAYKECLKNHAASLGGHALDGCGEFMPSPTATSADPTS 108

Query: 411 -KAVKRGFAHRVERRDVDNPPPTNNITD 491
            K    G      RR+ D+PPPT ++ D
Sbjct: 109 LKCAACGCHRNFHRREPDDPPPTTHVID 136


>UniRef50_A5K8K0 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 4501

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 336  NGSGSESAGSLRSGSGQGPVLRSIDKAVKRGFAHRVERRDVDNPPP 473
            NGSGS +     +GSG G  +RS  +  + G A   ERR+    PP
Sbjct: 2601 NGSGSGNGSGSGNGSGSGNPVRSRSRRKRGGDAEEGERRNRPLSPP 2646


>UniRef50_Q8RGC8 Cluster: Fe(3+) ions import ATP-binding protein
           fbpC; n=20; Bacteria|Rep: Fe(3+) ions import ATP-binding
           protein fbpC - Fusobacterium nucleatum subsp. nucleatum
          Length = 371

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +3

Query: 372 SGSGQGPVLRSID--KAVKRGFAHRVERRDVDNPPPTNNITDFYQNYTVCSILQIQQNSI 545
           SG G+  +LR I    ++++G  +  E+R  D  P   NI   +QNY +   L ++QN +
Sbjct: 39  SGCGKTTLLRMIAGFNSIEKGNFYFNEKRINDLDPAKRNIGMVFQNYAIFPHLTVEQN-V 97

Query: 546 EF 551
           EF
Sbjct: 98  EF 99


>UniRef50_UPI0000F211D6 Cluster: PREDICTED: hypothetical protein;
           n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 1126

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 348 SESAGSLRSGSGQGPVLRSID-KAVKRGFAHRVERRDVDNPPPTNNITDFYQNY-TVC 515
           S   G+L S   Q    R  D +   RG AH   + + ++PPP+N  T +   Y T+C
Sbjct: 573 SSQTGTLESKIQQDSTTRDCDHERAGRGNAHITRKNNNNSPPPSNTSTGYQYPYSTLC 630


>UniRef50_O86336 Cluster: BETA LACTAMASE LIKE PROTEIN; n=19;
           Mycobacterium|Rep: BETA LACTAMASE LIKE PROTEIN -
           Mycobacterium tuberculosis
          Length = 272

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 260 SINNMLALRILSTMILFPGHQELW 189
           SI ++ AL +L T IL PGH ELW
Sbjct: 226 SIRSLAALALLETNILAPGHGELW 249


>UniRef50_UPI00004F6724 Cluster: protocadherin 1 gamma 1; n=3; Danio
           rerio|Rep: protocadherin 1 gamma 1 - Danio rerio
          Length = 932

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 306 LLFRSIISGCNGSGSESAGSLRSGSGQGPVLRSIDKAVKRGFAHRVERRDVDNPPPTNNI 485
           +L+  + S  NG    S  S+   +G    +RS D    R F+ +V  RD  +PP ++N+
Sbjct: 482 VLYSLVPSEVNGVPMSSFLSINGDTGVIHTVRSFDYEQFRNFSVKVVARDNGSPPLSSNV 541

Query: 486 T 488
           T
Sbjct: 542 T 542


>UniRef50_Q11DU5 Cluster: Cobalamin synthesis protein, P47K; n=1;
           Mesorhizobium sp. BNC1|Rep: Cobalamin synthesis protein,
           P47K - Mesorhizobium sp. (strain BNC1)
          Length = 350

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 237 QC*HVVDADHSNRHHHGHRD 296
           QC H  D DH + HHH H D
Sbjct: 210 QCGHAHDHDHDHEHHHHHED 229


>UniRef50_A6ELB0 Cluster: Putative uncharacterized protein; n=1;
           unidentified eubacterium SCB49|Rep: Putative
           uncharacterized protein - unidentified eubacterium SCB49
          Length = 477

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 311 VSFNHQWMQWLRQRKRRIFAVWLGTGSRAAINRQSGQTWIRTSR 442
           +SF   +M WL+    R+F+ WL  G   ++ + + QT I  +R
Sbjct: 433 ISFIGSYMDWLKMDTFRVFSFWLHFGLLLSVLKNNRQTLISKTR 476


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,250,201
Number of Sequences: 1657284
Number of extensions: 12922259
Number of successful extensions: 41105
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 36945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40816
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)