Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0402
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.28 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.48 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.4  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   4.5  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   6.0  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   6.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 498 QNYTVCSILQIQQNSIEF*VIRLF 569
           +N  V S+LQ+ +N IE    RLF
Sbjct: 324 RNSVVASVLQLMENKIEITACRLF 347


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 424 RLTALSIDRSTGPCPEPDRKDPALSLPEPL-HPLMIERNSS 305
           ++T L  D +T P  EPD + P    P PL  PL+ E  SS
Sbjct: 68  QVTPLPSDGTTSP--EPDPEIPVAPEPAPLASPLVQEPGSS 106


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 396 LRSIDKAVKRGFAHRVERRDV 458
           LR++DK V  GF +  E R +
Sbjct: 207 LRNLDKIVTNGFRNVAESRKI 227


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 433 ANPRLTALSIDRSTGPCPEPDRKDPALSLPE 341
           +N  +    + R+    P+P++ DP   LPE
Sbjct: 85  SNAIIHIYDVHRNADIYPDPEKLDPDRFLPE 115


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 382 PEPDRKDPALSLPE 341
           PEP++ DP   LPE
Sbjct: 100 PEPEKFDPNRYLPE 113


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 382 PEPDRKDPALSLPE 341
           PEP++ DP   LPE
Sbjct: 102 PEPEKFDPDRFLPE 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,113
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)