Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0402
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.       31   3.1  
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch...    31   3.1  
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ...    31   3.1  
AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.              31   3.1  
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.     31   3.1  
DQ100856-1|AAZ08863.1|  126|Homo sapiens immunoglobulin heavy ch...    30   7.2  
AL445072-1|CAH70502.1|  463|Homo sapiens novel protein protein.        29   9.5  

>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
          Length = 4186

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +3

Query: 291 RDRLPLLFRSIISGCNGSGSESAGSLRSGSGQGPVLRSIDKAVKRGFAHRVERRDVDNPP 470
           +D   L+  +IISG N  G  +  SL   +G+  V+  +D   +R +A R+  +D   PP
Sbjct: 644 KDANGLVHYNIISG-NSRGHFAIDSL---TGEIQVVAPLDFEAEREYALRIRAQDAGRPP 699

Query: 471 PTNN 482
            +NN
Sbjct: 700 LSNN 703


>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
            protein.
          Length = 4024

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 339  GSGSESAGSLRSGSGQGPV-LRSIDKAVKRG 428
            G G     SL  G GQGP+ ++ ++KAVK G
Sbjct: 3452 GYGGSKLSSLSLGQGQGPIAMKMLEKAVKEG 3482


>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
           protein.
          Length = 3312

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +3

Query: 291 RDRLPLLFRSIISGCNGSGSESAGSLRSGSGQGPVLRSIDKAVKRGFAHRVERRDVDNPP 470
           +D   L+  +IISG N  G  +  SL   +G+  V+  +D   +R +A R+  +D   PP
Sbjct: 574 KDANGLVHYNIISG-NSRGHFAIDSL---TGEIQVVAPLDFEAEREYALRIRAQDAGRPP 629

Query: 471 PTNN 482
            +NN
Sbjct: 630 LSNN 633


>AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.
          Length = 2536

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 339  GSGSESAGSLRSGSGQGPV-LRSIDKAVKRG 428
            G G     SL  G GQGP+ ++ ++KAVK G
Sbjct: 2177 GYGGSKLSSLSLGQGQGPIAMKMLEKAVKEG 2207


>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
          Length = 4031

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 339  GSGSESAGSLRSGSGQGPV-LRSIDKAVKRG 428
            G G     SL  G GQGP+ ++ ++KAVK G
Sbjct: 3459 GYGGSKLSSLSLGQGQGPIAMKMLEKAVKEG 3489


>DQ100856-1|AAZ08863.1|  126|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 126

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +2

Query: 272 PSPSWASG*ATTTVSFNHQWMQWLRQRKRRIFAVWLGTGSRAAINRQSGQT 424
           P  S     A +T +F H WM W+RQ   +    W+G      IN   G T
Sbjct: 13  PGGSLTLSCAASTFTFTHAWMNWVRQAPGKGLE-WVG---HIKINTDGGTT 59


>AL445072-1|CAH70502.1|  463|Homo sapiens novel protein protein.
          Length = 463

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 339 GSGSESAGSLRSGSGQGPVLRSIDK--AVKRGFAHRVERRDV 458
           G+GS S+  L +  G+GP+L    K  A +R   H ++ R+V
Sbjct: 19  GAGSSSSQGLAAADGEGPLLPKKQKRPATRRRLVHYLKGREV 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,809,233
Number of Sequences: 237096
Number of extensions: 2044214
Number of successful extensions: 6001
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5965
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)