Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0400
         (542 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    29   0.075
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.7  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 29.5 bits (63), Expect = 0.075
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 337 HDHGGHQGHVTNVHWARGHNGGVSHDHRAT---LGPSATITGLGTMMAGSAMITGETA 173
           H H  H G+    +   G +GG +HDH A      PS  IT  G+ M+     TG ++
Sbjct: 124 HHHHHHHGNNGGGNGGGGGSGGNAHDHLADGLHSIPSPPITVSGSDMSSPGAPTGSSS 181


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 160  TFDCSGSTLSTGVALAASLMLIRMWTRGV 74
            T  CS     TGV +  S++L RM   GV
Sbjct: 1160 TVHCSAGVGRTGVFITLSIVLERMQYEGV 1188


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 356 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 252
           P  QG+  PRG PG   ++ +   P  RG+   +G
Sbjct: 240 PGPQGEVGPRGFPGRPGEKGVPGTPGVRGERGDKG 274


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 344 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQG 252
           G P P+G PG R  +    G   RG P   G
Sbjct: 104 GPPGPKGNPGLRGPKGERGGMGDRGDPGLPG 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,901
Number of Sequences: 2352
Number of extensions: 6056
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)