Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0400
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 29 2.9
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 28 3.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 3.8
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 28 5.0
AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical... 28 5.0
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 27 6.6
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 27 6.6
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 27 6.6
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 27 6.6
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 27 8.7
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 27 8.7
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 257
GH+ HDHGG GH + H G GG HDH
Sbjct: 41 GHD-HGGHDHGGWGGHDHHDH-HHGGWGGHDHDH 72
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -2
Query: 337 HDHGGHQ--GHVTNVHWARGHNGGVSHDH 257
HDHGGH GH H G G HDH
Sbjct: 32 HDHGGHDHGGHDHGGHDHGGWGGHDHHDH 60
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQ--GHVTNVHWARGHNGGVSHDH 257
GH+ HDHGGH G + H H G HDH
Sbjct: 36 GHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDH 70
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 257
GH+ HDHGGH H H G HDH
Sbjct: 31 GHD-HGGHDHGGHD------HGGHDHGGWGGHDH 57
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2
Query: 355 HNGRVSHDHGGHQGHVTNVHWARGHNG--GVSHDHRATLG 242
H+ H H G H H GH+G GV H H + G
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHG 594
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = -2
Query: 364 PRGHNGRVSHDHG----GHQGHVTNVHWARGHNGGVSHDHRA 251
P H SH HG H GH H A H+G H A
Sbjct: 436 PAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHA 477
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 358 GHNGRVSHD--HGGHQGHVTNVHWARGHNGGVSHDHRA 251
GH+G H H GH GH + GH+ H H A
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHA 599
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 355 HNGRVSH-DHGGHQGHVTNVHWARGHNG-GVSHDH 257
H+ H +HG H GH H A H+G SH H
Sbjct: 413 HHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGH 447
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRATLG 242
GH+G SH H GH H A H+G H H + G
Sbjct: 550 GHHG--SHHSPAHHGHHGEHHHAPAHHG--HHGHHGSHG 584
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDH 257
GH+G HG H+ H H GH+G GV H H
Sbjct: 578 GHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGH 615
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWARGHNG-----GVSHDHRAT 248
GH+G +HG H GH H A H+G G H H +
Sbjct: 517 GHHG----EHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGS 554
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = -2
Query: 253 ATLGPSATITG----LGTMMAGSAMITGETAGFSSTFDCSGSTLSTGVALAASLMLIRMW 86
+T P +T+T G+ +GS + TG T G S++ S ++LS+ + ++
Sbjct: 1209 STNSPGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPS 1268
Query: 85 TRGVSCPGTRGPTWTGDGTMGAST 14
T G S P T P+ + + +T
Sbjct: 1269 TSGSSTP-TPNPSQSTSPVVSTTT 1291
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 343 VSHDHGGHQGHVTNVHWARGHNG 275
V H GGH GHV H H+G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHG 57
>AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical
protein Y64G10A.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 RALVEAPIVPSPVHVGPLVPGQLTPLVHILINI-NDAASATPVESVEPEQSNVEE 167
+ L + P P+HV P P L P + D V+SVE + + +EE
Sbjct: 727 KLLEDVKCAPGPIHVEPTEPEVLEPAEEPMEEAEEDEEDEDDVDSVEGQTARIEE 781
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -1
Query: 344 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQGYTRSLGNN 228
GQP P G PG R P GQP G G++
Sbjct: 225 GQPGPNGQPGPRGPPGQAGSPGGNGQPGGPGQPGQRGSD 263
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 356 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGYTRSLGNN 228
P GQP PRG PG P GQP +G GN+
Sbjct: 227 PGPNGQPGPRGPPGQAGSPGGNGQPGGPGQPGQRGSDGQPGND 269
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -2
Query: 358 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRATLGP 239
GH G H G H GH H +R + G H H GP
Sbjct: 322 GHGGSGHHRGGRHGGH--GRHGSRSGSPGGRHGHGGRHGP 359
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 358 GHNGRVSHDH--GGHQGHVTNVHWARGHNGGVSH 263
GH GR H G H H + H RGH G H
Sbjct: 352 GHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRH 385
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 349 GRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRATLGPSATITGL 218
G H HGG H H GG SH H G +A + G+
Sbjct: 526 GEHGHSHGGGSSH------GHSHGGGGSHGHSHGGGGNANMQGV 563
>AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical
protein Y25C1A.3 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -2
Query: 277 GGVSHDHRATLGPSATITGLGTMMAGSAMITGETA--GFSSTFDCSGSTLSTGVALAAS 107
GG + A + T G T + T TA G ++T GST STGV +A+S
Sbjct: 310 GGSTATTAAGGSTATTAAGGSTASTAAGGSTASTAAGGSTATTAAGGSTASTGVTVASS 368
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 344 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQGYTRSLG 234
G+P PRG PG R Q G P QG + +G
Sbjct: 181 GRPGPRGLPGPRGQNGNPGRDGQPGHPGEQGSSGQIG 217
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 358 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVSHDH 257
GH H DHG GH + H + GH SHDH
Sbjct: 360 GHGHSHDHNDHGHSHGHDDHGHDSHGH----SHDH 390
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 358 GHNGRVSH-DHGGHQGHVTNVHWARGHNGGVSHDH 257
GH H DHG GH + H + GH SHDH
Sbjct: 378 GHGHSHDHNDHGHSHGHDDHGHDSHGH----SHDH 408
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 344 GQPRPRGTPGTRHQRALG*GPQWRGQPRSQGYTRSLG 234
G+P PRG PG R Q G P QG + +G
Sbjct: 181 GRPGPRGLPGPRGQNGNPGRDGQPGHPGEQGSSGQIG 217
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 328 GGHQGHVTNVH-WARGHNGGVSHDHRATLGPS 236
G HQ + + H + GH G H H+ GP+
Sbjct: 89 GSHQLRIDSHHVGSAGHGAGQGHGHKKEFGPA 120
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 328 GGHQGHVTNVH-WARGHNGGVSHDHRATLGPS 236
G HQ + + H + GH G H H+ GP+
Sbjct: 89 GSHQLRIDSHHVGSAGHGAGQGHGHKKEFGPA 120
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 356 PQWQGQPRPRGTPGTRHQRALG*GPQWRGQPRSQGY 249
P W G+P RG G R L P G P G+
Sbjct: 150 PGWPGEPGVRGMNGERGSTGLDGAPGEPGSPGLPGF 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,812,585
Number of Sequences: 27780
Number of extensions: 144360
Number of successful extensions: 747
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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