Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0398
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 490 FGAVTVSTPSEDNVLTRS 437
           FG V +S P+E+ V+T S
Sbjct: 53  FGGVQISPPNENLVVTSS 70


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 490 FGAVTVSTPSEDNVLTRS 437
           FG V +S P+E+ V+T S
Sbjct: 54  FGGVQISPPNENLVVTSS 71


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 490 FGAVTVSTPSEDNVLTRS 437
           FG V +S P+E+ V+T S
Sbjct: 54  FGGVQISPPNENLVVTSS 71


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 495 PPPNAAKGSYRSRKPD 542
           P P+  KGSY  R PD
Sbjct: 363 PDPSKRKGSYIFRLPD 378


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 48  WYYRHLFYLKFVVS 7
           WY + +FY K ++S
Sbjct: 226 WYSKKVFYSKIIIS 239


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 432 VNDLVSTLSSDGVLTVTAP 488
           VN+ V   S + VLTVTAP
Sbjct: 309 VNNSVGGESVETVLTVTAP 327


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 567 DAASGCLAGPVFVIGTIL 514
           D  S  + GPVFVI T+L
Sbjct: 290 DPQSPFIDGPVFVILTLL 307


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 370  TSTASFPVSSPAGTSCRPDTRSTTWSARCLPTACSP 477
            TS ++    +P  T+  P+ + T W     PT+  P
Sbjct: 1350 TSVSTTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 421 PDTRSTTWSARCLPTACSPSRRRNDLHLMRRKDRT 525
           P T    +S   L    +PS++R  LH+     RT
Sbjct: 141 PSTNELVFSEVLLFLDYNPSQKRQFLHITLASGRT 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,021
Number of Sequences: 336
Number of extensions: 2621
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)