Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0398
(633 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 64 7e-11
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 63 2e-10
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 56 2e-08
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 54 1e-07
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 52 4e-07
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 4e-07
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 52 4e-07
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 42 4e-04
SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18) 36 0.027
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.45
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_22885| Best HMM Match : Apc13p (HMM E-Value=5.6) 29 4.1
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046) 29 4.1
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 28 7.2
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_43946| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_20408| Best HMM Match : rve (HMM E-Value=0.0034) 27 9.6
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_54| Best HMM Match : Actin (HMM E-Value=0) 27 9.6
SB_48350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_47845| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +3
Query: 261 EKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 437
+KF++ LD ++F P+EIT K N + V G + +E GF S++F R Y LP G + +
Sbjct: 4 DKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVDES 62
Query: 438 DLVSTLSSDGVLTVTAPKRPPPNAAKGSYRSRKPD 542
+ + ++ DG+L V A K+ PP + + K D
Sbjct: 63 SISTRIAEDGMLHVEALKKSPPATTENKAPATKDD 97
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 KFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFIS-RQFTRRYILPTGYEVND 440
KF + LD F P+E+ VK + + V + E +EHGF + RQF R ++LP +++
Sbjct: 99 KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVDMDT 156
Query: 441 LVSTLSSDGVLTVTAPKRP 497
LV L DGVL + A KRP
Sbjct: 157 LVPRLGKDGVLYIEADKRP 175
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +3
Query: 168 PLDLALQKFIIQTLEGELSQAGIFFDDQFTKEKFEVI-LDDQQFTPDEITVKASNNTVVV 344
P DL Q GE + + + +K E+ LD + + P+EI++K + + +
Sbjct: 7 PKDLKHQATTRLEQLGETRNCSLAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKI 66
Query: 345 EGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPP 500
+GKH+ + EHG+ + +F R Y LP G +V+ + S ++ DG+L + A K P
Sbjct: 67 DGKHKS-EGEHGYETSEFHRSYNLPDGVDVSTVSSRITGDGLLHIEALKAEP 117
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 402 RRYILPTGYEVNDLVSTLSSDGVLTVTAPK--RPPPN 506
R ++LP +++ LVS L DG L + A + P P+
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTPH 197
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 258 KEKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
+ K E+ LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 5 ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63
Query: 435 NDLVSTLSSDGVLTVTAPKR-PPPNAAKGSYRSRK 536
+++ + +S+ G L + A K P P+ AK + K
Sbjct: 64 SNVKTRISNHGQLHIEAMKALPEPDGAKKESKDDK 98
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D + F P+ I V+ N ++V HE + + H + + F R++ILP +++
Sbjct: 97 DKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREVDMDS 155
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 458
LD +++ P+EI+ K N V V+G+H + E GF ++F R + LP G + ++ S +S
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70
Query: 459 SDGVLTVTAPKR-PPPNA 509
+ G L + A K P P A
Sbjct: 71 NHGHLHIEARKALPKPEA 88
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +3
Query: 258 KEKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 437
++KF + +D F P+ I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 95 EDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVDMD 153
Query: 438 DLVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A K P
Sbjct: 154 SLTTRLDKEGKLHFEAKKSVAP 175
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 390 LTTRLDKEGKLHFEAKKRNAP 410
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 KEKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
+ K E+ LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 435 NDLVSTLSSDGVLTVTAPKRPP 500
+++ + +S+ G L + A K P
Sbjct: 63 SNVKTRISNHGQLHIEAMKALP 84
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 279 LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLS 458
LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E +++ + +S
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRIS 304
Query: 459 SDGVLTVTAPKRPP 500
+ G L + A K P
Sbjct: 305 NHGQLHIEAMKALP 318
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 KEKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
+ K E+ LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 435 NDLVSTLSSDGVLTVTAPKRPP 500
+++ + +S+ G L + A K P
Sbjct: 63 SNVKTRISNHGQLHIEAMKALP 84
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 KEKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
+ K E+ LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 435 NDLVSTLSSDGVLTVTAPKRPP 500
+++ + +S+ G L + A K P
Sbjct: 63 SNVKTRISNHGQLHIEAMKALP 84
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +3
Query: 261 EKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 440
+KF + +D F PD I V+ N ++V HE + + H + + F R+++LP +++
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 441 LVSTLSSDGVLTVTAPKRPPP 503
L + L +G L A KR P
Sbjct: 156 LTTRLDKEGKLHFEAKKRNAP 176
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 KEKFEVI-LDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
+ K E+ LD +++ P+EI+ K N V V+G+H + GF ++F R + LP G E
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 435 NDLVSTLSSDGVLTVTAPKRPP 500
+++ + +S+ G L + A K P
Sbjct: 63 SNVKTRISNHGQLHIEAMKALP 84
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 264 KFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFIS-RQFTRRYILP 419
KF + LD F P+E+ VK + + V + E +EHGF + RQF R ++LP
Sbjct: 27 KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLP 77
>SB_5939| Best HMM Match : BAH (HMM E-Value=7.9e-18)
Length = 1086
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 410 HPADRIRGQRPGQHVVFRRRAHRHGAETTST*CGERIVPIT 532
H A R R +H V RRRAH ++T S+ CG+ V +T
Sbjct: 406 HSAQSSRPHRRRRHNVLRRRAHTRNSKTVSSDCGKDYVDLT 446
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +3
Query: 291 QFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGV 470
Q TP + + E K+EE DEHG I R+ T+ E + T++ DGV
Sbjct: 1169 QITPISQIPSSLTEKLQPETKYEEYVDEHGQIIRRTTKVKHTAVKQERTTVTKTVTRDGV 1228
Query: 471 LT 476
T
Sbjct: 1229 TT 1230
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 421 PDTRSTTWSARCLPTACSPSRRRNDLHLMRRKD---RTDHENRTR 546
PD R LP+A P+R+R+D L RR D R D E R R
Sbjct: 1105 PDESLPRSPTRWLPSAREPTRQRSDEDLRRRSDSWHRRDDEERMR 1149
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 285 DQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSD 464
D + +P T + SN + + E+ + + R + L E + V++ S+
Sbjct: 857 DVEESPASSTTETSNRGKPAQHQDNEEDEPENKVKRNKGKPARLQDHEEDEEPVASTSAT 916
Query: 465 GVLTVTAPKRPPPNAAKGSYRSRK 536
G+ T T K P P +A+ + SRK
Sbjct: 917 GI-TKTPGKGPNPKSARSTRSSRK 939
>SB_22885| Best HMM Match : Apc13p (HMM E-Value=5.6)
Length = 381
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 261 EKFEVIL-DDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 437
EKFE + DD+ TPD I++ +S + VE H EK + G + ++ T
Sbjct: 66 EKFEKAVRDDEDKTPD-ISITSSEDEQAVESFHSEKPAD-GDSDDDYKPNLVMLTHSLSE 123
Query: 438 DLVSTLSS 461
DL S SS
Sbjct: 124 DLKSDSSS 131
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 287 SAIHSRRDHGQGVEQHGCRRRQARGETGRARLHFPSVHPPVHPADRIRGQRP-GQHVVFR 463
S H RR + + RRR++R R R PS H H R R + P +H R
Sbjct: 215 SPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSH-RSRSRSRSPRRRHSRSR 273
Query: 464 RRAHR 478
HR
Sbjct: 274 SPTHR 278
>SB_8742| Best HMM Match : TPR_2 (HMM E-Value=0.00046)
Length = 940
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 165 IPLDLALQKFIIQTLEGELSQAGIFFDDQFTKEKFEVILDDQQ 293
+P DLA Q+ +IQ L GI FT ++ +LDDQQ
Sbjct: 542 LPDDLAFQE-LIQKQNPALGLDGIRKSKSFTNDEANFLLDDQQ 583
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 491 TTST*CGERIVPITKTGPAKQPEAASSKPEQQQPREQ 601
T ST G R V T QPE S + +QQQ ++Q
Sbjct: 163 TQSTGVGTRDVDATDGSSQTQPEGTSGEGDQQQEQQQ 199
>SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2431
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 491 TTST*CGERIVPITKTGPAKQPEAASSKPEQQQPREQ 601
T ST G R V T QPE S + +QQQ ++Q
Sbjct: 2324 TQSTGVGTRDVDATDGSSQTQPEGTSGEGDQQQEQQQ 2360
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 351 KHEEKQDEHGFISRQFTRRYIL 416
KHEE++D HG++ + T ++ L
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.5 bits (58), Expect = 9.6
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 326 EQHGCRRRQARGE--TGRA--RLHFPSVHPPVHPADRIRGQRPGQHVVFRRRAHRHGAET 493
+Q R R R T R+ R H PSV PP R R + R+R ++G +
Sbjct: 498 DQSRSRSRSPRSHRSTSRSPRRRHSPSVSPPYRRRSRSRSPQ-------RQRLGKYGRDI 550
Query: 494 TST*CGERIVPITKTGP 544
T T G I+ IT P
Sbjct: 551 TCTRYGTIIIVITTEMP 567
>SB_43946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 483 APKRPPPNAAKGSYRSRKP 539
AP PP K SYR RKP
Sbjct: 35 APMEPPAQEKKDSYRQRKP 53
>SB_20408| Best HMM Match : rve (HMM E-Value=0.0034)
Length = 887
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 396 FTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAAK 515
+TRR L + V+ +++G VT P RPP AA+
Sbjct: 446 YTRRRELAAAFTRTPAVNQRATEGTNDVTPPARPPLAAAQ 485
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 168 PLDLALQKFIIQTLEGELSQAGIFFDDQFTKEKFEVILD 284
P+DLA++K I++ G L+ A F +EK + D
Sbjct: 785 PIDLAIKKIIVEVRGGNLNHAVEKLCSAFVREKIKTSPD 823
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 459 SDGVLTVTAPKRPPPNAAKGSYRSRKP 539
SD L TAP RPP + A+ ++RS P
Sbjct: 363 SDDALLHTAPARPPFSTAQRTHRSWDP 389
>SB_48350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 452 VVFRRRAHR-HGAETTST*CGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSLN 628
VV RR R + ET S + + KT QPE +S KPE P +M T+ +
Sbjct: 782 VVVRRLDERSYDIETPSGKYRRNRIELRKTSET-QPELSSRKPEVVPPPAEMESSTTTQS 840
Query: 629 P 631
P
Sbjct: 841 P 841
>SB_47845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 204 TLEGELSQAGIFFDDQFTKEKFEVILDDQQFTP--DEITVKASNNTV-VVEGKHEEKQD 371
++ E + G +FDD F E EV DD+ F D +++ ++ +E H++ +D
Sbjct: 31 SVHDEGRETGYYFDDDFLDEWNEVFQDDELFDKILDNMSLSQLEASMSQLEESHDDSRD 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,446,985
Number of Sequences: 59808
Number of extensions: 378129
Number of successful extensions: 1391
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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