Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0398
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   114   2e-27
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    26   1.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.6  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.1  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  114 bits (275), Expect = 2e-27
 Identities = 48/80 (60%), Positives = 68/80 (85%)
 Frame = +3

Query: 255 TKEKFEVILDDQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 434
           +K+KF++ LD QQF+P+EI+VK  +N V+VEGKHEEKQD+HG++SR F RRY+LP G+  
Sbjct: 11  SKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNE 70

Query: 435 NDLVSTLSSDGVLTVTAPKR 494
            D+VS+LSSDG+LT+T P++
Sbjct: 71  ADIVSSLSSDGILTITCPRK 90


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 183 LQKFIIQTLEGELSQAGIFFDDQFTKEKFEVILDDQQFTPDEITVKASNN 332
           L++ I+Q L   + +     DDQF        +D  Q   D ++V  S N
Sbjct: 487 LERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTVDAIQRVVDIVSVARSRN 536


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +3

Query: 288 QQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 461
           +++ P+E TV  SN   +V+G+   K        +     Y   + Y+ +   S+ SS
Sbjct: 69  EKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSS 126


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 136 SSDPCRSAGPVVWRGARYAPSHPTNRETSLVLSTS 32
           S+DP R++GP  W     +   P++   +++ ++S
Sbjct: 213 SADPSRNSGPSSWMSGAGSVGGPSSAAAAMLSASS 247


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 384 ISRQFTRRYILPTGYEVNDLVST 452
           +S Q T+R   PTG  +N+L+ST
Sbjct: 290 LSTQRTKRDFHPTGCSLNNLLST 312



 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 TASFPVSSPAGTSCRPDTRSTTWSARCLPT 465
           +A  P SS + +S RP   ST+ S+  +PT
Sbjct: 32  SADVPHSSTSQSSRRPQHSSTSASSSSVPT 61


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 384 ISRQFTRRYILPTGYEVNDLVST 452
           +S Q T+R   PTG  +N+L+ST
Sbjct: 290 LSTQRTKRDFHPTGCSLNNLLST 312



 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 TASFPVSSPAGTSCRPDTRSTTWSARCLPT 465
           +A  P SS + +S RP   ST+ S+  +PT
Sbjct: 32  SADVPHSSTSQSSRRPQHSSTSASSSSVPT 61


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 509 GERIVPITKTGPAKQPEAASSKPEQQQPREQ 601
           GER VP       +Q +    + +QQQ R+Q
Sbjct: 294 GERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,096
Number of Sequences: 2352
Number of extensions: 11953
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)