Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0395
         (396 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88169-3|AAK68396.1|  345|Caenorhabditis elegans Hypothetical pr...    29   0.91 
U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical pr...    29   0.91 
AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine re...    28   2.1  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    28   2.8  
Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ...    27   6.4  
AL117202-2|CAB55092.1|  302|Caenorhabditis elegans Hypothetical ...    26   8.5  
AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm rece...    26   8.5  

>U88169-3|AAK68396.1|  345|Caenorhabditis elegans Hypothetical
           protein T03F1.6b protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 214 YSQRFIYR-IK*LKT*VDEGDIMMQFVNFEKRVTN 113
           + +R IYR IK L+  V + D  + F+N + RVTN
Sbjct: 45  FVERIIYREIKALRVEVHDNDYSVYFINKDSRVTN 79


>U88169-2|AAB42234.1|  342|Caenorhabditis elegans Hypothetical
           protein T03F1.6a protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 214 YSQRFIYR-IK*LKT*VDEGDIMMQFVNFEKRVTN 113
           + +R IYR IK L+  V + D  + F+N + RVTN
Sbjct: 45  FVERIIYREIKALRVEVHDNDYSVYFINKDSRVTN 79


>AF003385-7|AAB54247.1|  381|Caenorhabditis elegans Serpentine
           receptor, class w protein7 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 90  YLKNK*QKFVTRFSKLTNCIIISPSSTHVFNYLILYINR*EYLQQEEKRKRN 245
           YL    +K V +F+   +CI +  S+ +VF  L L +     LQ+ +KR++N
Sbjct: 216 YLLLNNEKLVDKFNYADSCISLVVSTLYVFVALALVVE----LQRTKKRRKN 263


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 106 YLFLRYYGVC-SCYFYYFKREIIVLPYLYQYVGYC 5
           YL L ++  C  C F+     ++ L ++Y+YV  C
Sbjct: 85  YLDLGFFAPCVRCMFFSLSYGVLELHFIYRYVALC 119


>Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical protein
            B0024.6 protein.
          Length = 1161

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 366  KM*KRHVINKM*NGRFIQRYIFDILKHELHNCQTQRFNTSCFFFFSLLVVNILNDLYT 193
            +M  R V +K+  G+ ++   FDI+   L       F T       L VVN+LN LYT
Sbjct: 926  RMLPRQVADKLKLGQTVEPETFDIVT--LFFSDVVSFTTLAGKCTPLQVVNLLNGLYT 981


>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
           protein F59F3.5 protein.
          Length = 1199

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 314 RGISLTFLNTNYIIVKHKDLIHR 246
           R I++ F  T Y IVK+K+  HR
Sbjct: 646 RNITIDFTGTYYCIVKNKEFEHR 668


>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
            protein T05C3.2 protein.
          Length = 1733

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 167  HSCLQLFDSVYKSLRIFTTRREKKKKHDVL 256
            H  L +FD+V K+ +I    R+ KK+ DV+
Sbjct: 1516 HDSLLVFDAVEKTQKIKFRPRQSKKQKDVM 1545


>AL117202-2|CAB55092.1|  302|Caenorhabditis elegans Hypothetical
           protein Y47D3A.2 protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 295 NVKDIPLNEPSILHFINYVPFLHFIKIKWYFK 390
           NV+D+ +   + LH   ++PFL+  +I   FK
Sbjct: 231 NVRDVLVKSSNFLHCYIHLPFLNIQEIATIFK 262


>AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 160 protein.
          Length = 336

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
 Frame = +3

Query: 126 FSKLTNCIII------SPSSTHVFNYLILYIN 203
           FS LTNC+II      SPS    + YL+ Y +
Sbjct: 18  FSLLTNCVIIVLIFSSSPSKMGSYKYLLCYFS 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,521,638
Number of Sequences: 27780
Number of extensions: 170557
Number of successful extensions: 528
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)