Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0392
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    33   0.003
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    33   0.003
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.4  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   8.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 526 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDTCVWLEEELK 663
           K  SGG + R++ A  +   P L+  DEPT+ LD    + + + LK
Sbjct: 218 KGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLK 263


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 526 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLDLDTCVWLEEELK 663
           K  SGG + R++ A  +   P L+  DEPT+ LD    + + + LK
Sbjct: 218 KGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLK 263


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 566 HERYMLSRTYCCWTSQQT 619
           H+      TYC WTS+++
Sbjct: 139 HQAICYPLTYCSWTSRRS 156


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 523 LPSAAFLGEAKTMQDISSTR 464
           +PSA   G    + DISSTR
Sbjct: 106 MPSAGLCGSHDEIPDISSTR 125


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 523 LPSAAFLGEAKTMQDISSTR 464
           +PSA   G    + DISSTR
Sbjct: 54  MPSAGLCGSHDEIPDISSTR 73


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 523 LPSAAFLGEAKTMQDISSTR 464
           +PSA   G    + DISSTR
Sbjct: 237 MPSAGLCGSHDEIPDISSTR 256


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 15  LKLEAEAKMNSEARSCTGSLAVHPRSRDIKIANFSI 122
           L+   + K ++ ++S  G     PR+  +K+  FSI
Sbjct: 37  LRTGEKRKRSTSSQSTEGENDARPRASQVKLNVFSI 72


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  CLKLEAEAKMNSEARSCTGSLAVHPRSRDIKI 107
           C KL+ +   NSE R+    LA H  +  + I
Sbjct: 312 CYKLQEQFVTNSEVRTELFKLAQHVSANIVHI 343


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 12  CLKLEAEAKMNSEARSCTGSLAVHPRSRDIKI 107
           C KL+ +   NSE R+    LA H  +  + I
Sbjct: 312 CYKLQEQFVTNSEVRTELFKLAQHVSANIVHI 343


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 431 DRIHPSIAPVIHHLHSG 381
           D IH S+ PV+  +H G
Sbjct: 66  DGIHTSLYPVLVWIHGG 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,389
Number of Sequences: 336
Number of extensions: 3661
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)