Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0392
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    40   9e-05
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    40   9e-05
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    40   9e-05
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.1  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = +1

Query: 526 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 627
           K  SGG R R+A A      PHLLL DEPT+ LD
Sbjct: 242 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = +1

Query: 526 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 627
           K  SGG R R+A A      PHLLL DEPT+ LD
Sbjct: 242 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 275


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 39.9 bits (89), Expect = 9e-05
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = +1

Query: 526 KDFSGGWRMRIALARALYVKPHLLLLDEPTNHLD 627
           K  SGG R R+A A      PHLLL DEPT+ LD
Sbjct: 220 KGLSGGERKRLAFASETLTDPHLLLCDEPTSGLD 253


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 189 LVGLNGCGKSSLLAAL 236
           LVG NG GKS++LAA+
Sbjct: 112 LVGKNGSGKSAILAAM 127


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 473 QHAPLPCRRSNRPDD 429
           +H P PCR   RP+D
Sbjct: 665 RHCPAPCRCYIRPED 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,316
Number of Sequences: 2352
Number of extensions: 16582
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)