Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0387
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   3.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   6.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 138 SQVQQDGGEHQRWRQNHPQSWYRRSQRL 55
           S V  D G   + +  H   W+RR  RL
Sbjct: 2   SGVVGDAGRASKGQDKHMVHWFRRGLRL 29


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 384 LQQQHPAHQPSQWKQQLCWYLG 449
           +Q+QHP H     +QQ   Y G
Sbjct: 171 MQEQHPQHHQPHHQQQHMMYGG 192


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 384 LQQQHPAHQPSQWKQQLCWYLG 449
           +Q+QHP H     +QQ   Y G
Sbjct: 173 MQEQHPQHHQPHHQQQHMMYGG 194


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 107 WCSPPSCWTCDRTHEWQNFHLRSSLLTNTR 196
           W SP    TCD  +E+Q F    SLL + +
Sbjct: 564 WASP----TCDLMYEFQIFTFLMSLLQSIK 589


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 313 HLHGSYNMNNLNNDVAIINHNH 378
           H H +YN N L+N     N+ H
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 313 HLHGSYNMNNLNNDVAIINHNH 378
           H H +YN N L+N     N+ H
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 494 PTTNKTPSEPPGHHQRRLRP 553
           PTT  TPS PP   + RL P
Sbjct: 95  PTTPPTPSPPP---EERLTP 111


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 313 HLHGSYNMNNLNNDVAIINHNH 378
           H H +YN N L+N     N+ H
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 313 HLHGSYNMNNLNNDVAIINHNH 378
           H H +YN N L+N     N+ H
Sbjct: 65  HNHQNYNSNVLSNGYGYGNYYH 86


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 649 DGERPPESPLQVLRPLAPKHRGEP 578
           D ++P  SPL   R  A  H G P
Sbjct: 907 DEDKPSVSPLTSPRQPAETHAGSP 930


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 202 DRGSLLENQERPGSSVHPAFGTANIFSGGTRVTTSSVHLH 321
           +RG L  N+  PG S+    G   +      +  + V LH
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVIDVENHIEGNEVTLH 200


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 202 DRGSLLENQERPGSSVHPAFGTANIFSGGTRVTTSSVHLH 321
           +RG L  N+  PG S+    G   +      +  + V LH
Sbjct: 161 ERGILTANRMIPGPSIQVCEGDKVVIDVENHIEGNEVTLH 200


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 241 SLGVPGSPAVSRGHG 197
           SL VPG+P +   HG
Sbjct: 143 SLQVPGAPMMMSSHG 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,601
Number of Sequences: 336
Number of extensions: 2514
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)