Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0387
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0786 - 7606984-7607037,7607235-7607379,7608103-7608163,760...    30   1.9  
02_02_0549 + 11410129-11412180                                         29   2.5  
08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    28   5.8  
08_02_0638 + 19603399-19604679                                         28   7.6  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    28   7.6  
03_06_0021 - 31084185-31084535                                         28   7.6  

>08_01_0786 -
           7606984-7607037,7607235-7607379,7608103-7608163,
           7608273-7608465
          Length = 150

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 172 PQMEVLPFVSAITSPARWG*APALAAEPPTILV 74
           P    LPF S + + AR G APAL+A P   LV
Sbjct: 11  PARSALPFRSRVAAAARPGRAPALSAAPGRRLV 43


>02_02_0549 + 11410129-11412180
          Length = 683

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = +1

Query: 184 DQHPLRDRGSLLENQERPGSSVHPAFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAI 363
           D   L   G +L    R   +   A     +F+G   V ++S HL         N D   
Sbjct: 106 DTQDLGGHGVVLVVAPRANLTTGLANNYMGLFNGTGSVGSASNHLFAVELDTIQNPDFRD 165

Query: 364 INHNHVGFNNN 396
           IN+NHVG N N
Sbjct: 166 INNNHVGININ 176


>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -3

Query: 643 ERPPESPL-QVLRPLAPKHRGEPMITEFPYVRAQTALVMTWRLTWR-FVGCW 494
           E+ P S L ++LRP    HR   +++EF  V  + AL  +  + +R F G W
Sbjct: 4   EKHPSSKLSEILRPGKLLHRRRRLVSEFADVGREDALHESDTVKYRVFAGTW 55


>08_02_0638 + 19603399-19604679
          Length = 426

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 661 SAAADGERPPESPLQVLRPLAPKHRGEP 578
           + AA G  P   P  +LRP A KH   P
Sbjct: 186 ATAAGGGNPSSLPAYLLRPFAQKHHPSP 213


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 120 GGEHQRWRQNHPQSW 76
           GG HQR R +HP +W
Sbjct: 559 GGHHQRRRHHHPPAW 573


>03_06_0021 - 31084185-31084535
          Length = 116

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 291 GAAGEDVSCTKSGVN*RAWAFLVLQQ*AAVTERVLVSKELRRWK 160
           G  G +V+   + VN  AWAF V ++ ++ +     +  LRRW+
Sbjct: 72  GGGGREVTWMVADVN-MAWAFPVAKKRSSASASPSAASALRRWR 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,919,770
Number of Sequences: 37544
Number of extensions: 332222
Number of successful extensions: 1318
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)