Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0387
(663 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.007
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.017
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.022
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.039
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 34 0.090
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 34 0.090
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 34 0.090
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 33 0.21
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.27
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.48
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 30 1.9
SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 28 5.9
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 28 5.9
SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8) 28 5.9
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 28 5.9
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 28 5.9
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 28 7.8
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 28 7.8
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 429 QLCWYLGLGCRLREDLRCCFGSQQPTK-RQVSLQVITNAVCARTYGNSVIIGSPLCFG-- 599
Q CW G G G QP K Q S+ +++ + C Y N I S LC G
Sbjct: 74 QKCWITGWGT-------LASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLD 125
Query: 600 ANGRSTCSGDSGG 638
A G C GDSGG
Sbjct: 126 AGGIDACQGDSGG 138
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 429 QLCWYLGLGCRLREDLRCCFGSQQPTK-RQVSLQVITNAVCARTYGNSVIIGSPLCFG-- 599
Q CW G G G QP K Q S+ +++ + C Y N I S LC G
Sbjct: 418 QKCWITGWGT-------LASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLD 469
Query: 600 ANGRSTCSGDSGG 638
A G C GDSGG
Sbjct: 470 AGGIDACQGDSGG 482
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 489 GSQQPTKRQVSLQVITNAVCARTYGNSVIIGSP--LCFGANGRSTCSGDSGG 638
GS +Q L V ++ C RT G V + S +C G G+ C GDSGG
Sbjct: 167 GSAAGILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDSGG 218
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 510 RQVSLQVITNAVCARTYGNSVIIGSPLCFGANGRSTCSGDSGG 638
+Q + ++ C T G +V S +C G G S C+GDSGG
Sbjct: 433 QQSKVPLVNYTTCRSTNGATVDENSMICAGGAGSSACNGDSGG 475
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 435 CWYLGLGCRLREDLRCCFGSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFGAN--G 608
CW G G RL G+ +Q S+ V++ A C + Y I S LC G + G
Sbjct: 825 CWITGWG-RLASG-----GTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGG 877
Query: 609 RSTCSGDSGG 638
TC GDSGG
Sbjct: 878 IDTCQGDSGG 887
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 432 LCWYLGLGCRLREDLRCCFGSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFG---A 602
+C+ G G RL+ G T +Q + +++ C R YG + S +C G
Sbjct: 445 ICYIAGWG-RLQS-----LGDVALTLQQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTE 498
Query: 603 NGRSTCSGDSGG 638
N S+C GDSGG
Sbjct: 499 NAASSCQGDSGG 510
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +3
Query: 435 CWYLGLGCRLREDLRCCFGSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFG---AN 605
CW G G ++ G +Q + + ++ C R YG+ + + LC G N
Sbjct: 68 CWLTGWGRQVDSS-----GPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPN 122
Query: 606 GRSTCSGDSGG 638
C GDSGG
Sbjct: 123 AAGACQGDSGG 133
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 510 RQVSLQVITNAVCARTYGNSVII--GSPLCFGANGRSTCSGDSGG 638
++ L V +NA C + G + + S +C G GR C GDSGG
Sbjct: 548 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGPGRGGCQGDSGG 592
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 510 RQVSLQVITNAVCARTYGNSVII--GSPLCFGANGRSTCSGDSGG 638
++ L V +NA C + G + + S +C G GR C GDSGG
Sbjct: 88 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGPGRGGCQGDSGG 132
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 435 CWYLGLGCRLREDLRCCFGSQQPTKRQVSLQVITNAVCAR--TYGNSVIIGSPLCFGANG 608
CW G G RL G+ +Q ++++ A C + +Y + + + LC G
Sbjct: 342 CWITGWG-RLHSG-----GASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPG 395
Query: 609 RSTCSGDSGG 638
TC GDSGG
Sbjct: 396 IDTCQGDSGG 405
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 489 GSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFG--ANGRSTCSGDSGG 638
GS QV + +++ + C+R Y S + S +C G + G +C GDSGG
Sbjct: 9 GSSPTVLMQVEVPIVSASTCSRAY--SRLHESMVCAGRASGGIDSCQGDSGG 58
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 489 GSQQPTKRQVSLQVITNAVCARTYGNSVIIGSP-LCFGAN--GRSTCSGDSGG 638
G PT +Q+ + ++ +VC S II +C G N G+ C GDSGG
Sbjct: 127 GVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGCLGDSGG 179
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 489 GSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFG--ANGRSTCSGDSGG 638
GS +Q ++ V+ A C + Y I S LC G A G C GDSGG
Sbjct: 462 GSAPDILQQATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQGDSGG 512
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 489 GSQQPTKRQVSLQVITNAVCARTYGNSVIIGSPLCFG--ANGRSTCSGDSGG 638
GSQ Q + + T + C R+Y I +C G G TC GDSGG
Sbjct: 768 GSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGG 818
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 489 GSQQPTK--RQVSLQVITNAVCAR--TYGNSVIIGSPLCFGANGRSTCSGDSGG 638
G QP++ +Q L V +++ C R +Y V S +C G G C GDSGG
Sbjct: 207 GGGQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDSGG 260
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 199 RDRGSLLENQERPGSSVHPAFGTANIFSGGTR 294
RD+ + +Q+ P S H FGT+N + G R
Sbjct: 1194 RDQARIFSHQDAPSSCPHVGFGTSNTIASGDR 1225
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 489 GSQQPTKRQ-VSLQVITNAVCARTY--GNSVIIGSPLCFGANG--RSTCSGDSGG 638
GS P Q V L ++ ++ C TY + I C G G ++ CSGDSGG
Sbjct: 432 GSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAGTEGVAKAVCSGDSGG 486
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +3
Query: 489 GSQQPTKRQ-VSLQVITNAVCARTY--GNSVIIGSPLCFGANG--RSTCSGDSGG 638
GS P Q V L ++ ++ C TY + I C G G ++ CSGDSGG
Sbjct: 681 GSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAGTEGVAKAVCSGDSGG 735
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 588 LCFGANGRSTCSGDSGG 638
+C G +G S CSGDSGG
Sbjct: 484 ICAGGSGSSACSGDSGG 500
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 501 PTKRQVSLQVITNAVC-ARTYGNSVIIGSPLCFG--ANGRSTCSGDSGG 638
P ++ + +++ VC A N I C G GR +C GDSGG
Sbjct: 134 PVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGG 182
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 178 LTDQHPLRDRGSLLENQERPGSSVHPAFGTANIFSG-GTRVTTSSVHLHGSYNMNNLNND 354
+ + + + + S + N+ ++ + + N + R +S++ + N N++NN+
Sbjct: 1720 IINNNSINNNNSSINNRSNNHNNNNNSINNCNNNNSINNRNNNNSINNRNNTNNNSINNN 1779
Query: 355 VAIINHNHVGFNNN 396
+ IN+N+ NNN
Sbjct: 1780 NSSINNNNSSINNN 1793
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 337 NNLNNDVAIINHNHVG-FNNNIQRINL 414
NN+NN+ IIN+N++ NNNI IN+
Sbjct: 409 NNINNNNIIINNNNIIIINNNIININI 435
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 343 LNNDVAIINHNHVGFNNNIQRINL 414
+NN+ IIN+N++ NNNI N+
Sbjct: 393 INNNNIIINNNNIIINNNINNNNI 416
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 313 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQRIN 411
+++ + N NN NN++ IN+N+ NNNI N
Sbjct: 92 NINNNNNNNNNNNNINNINNNNNNNNNNINNNN 124
>SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 503 NKTPSEPPGHHQRRLRPHVRKLCDHWLTSV 592
+K P GH L PH R +CDH+ SV
Sbjct: 90 DKPGRRPYGHLPHDLLPHGRGVCDHYSVSV 119
>SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 256 RGELTSLGVPGSPAVSRGHGAGVGQ*GTPQMEVLPFVSAITSPAR 122
RG+ + G+ A + HGA GQ + + EV P V+A T P++
Sbjct: 14 RGQTSLKSQNGANAWHQKHGAKPGQSSSTRKEVKPRVAAKTEPSK 58
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 588 LCFGANGRSTCSGDSGG 638
+C G G S C+GDSGG
Sbjct: 110 MCVGGAGSSACNGDSGG 126
>SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +1
Query: 163 PSAEFLTDQHPLRDRGSLLENQERPGSSVHPAFGTANIFSGGTRVTTSSVHLHGSYNMNN 342
PS DQH + + + + + HP+ GT + T +T HL + N+ N
Sbjct: 40 PSGTITLDQHNVPNSSGTITLDQH--NVPHPS-GTITLDQHSTYLTQQYHHLRSALNVPN 96
Query: 343 LNNDVAIINHN 375
+ + + HN
Sbjct: 97 FSGTITLDQHN 107
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 543 VCARTYGNSVIIGSPLCFGA---NGRSTCSGDSGGLSPSAAAE 662
+C++T GN V LC NG TCSG+S +P A+
Sbjct: 221 LCSKTCGNGVRTRYRLCNNPVPINGGRTCSGESRENAPCKVAD 263
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 510 RQVSLQVITNAVCARTYGNSVIIGSPLCFG--ANGRSTCSGDSGG 638
R + ++ N VC R+ ++ C G G TC GDSGG
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8)
Length = 213
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 325 SYNMNNLNNDVAIINHNHVGFNNN 396
S N NN+NN++ I N+N+ NNN
Sbjct: 126 SDNNNNINNNIIINNNNNNDENNN 149
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 158 SAIRECDHKSSKMGVSTSVGGRTTHNPGTVEVSGF 54
+A R+CD +S S TTH G +++GF
Sbjct: 267 AANRDCDDSASSTSDKESAPDETTHASGNTKLTGF 301
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 510 RQVSLQVITNAVCARTYGNSVIIGSPL-CFGANG--RSTCSGDSGG 638
++ S+ ++ C Y N I + + C G G + TC GDSGG
Sbjct: 1931 QEASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGG 1976
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 381 WLQQQHPAHQPSQWKQQLCWYLGLGCRLR 467
W+ + HP H+ ++LC+ +G C R
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCAR 485
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 570 VIIGSPLCFGANGRSTCSGDSGG 638
V+ S +C G G S C GDSGG
Sbjct: 128 VLDKSMVCAGGAGSSICHGDSGG 150
>SB_19049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 268 ANIFSGGTRVTTSSVHLHGSYNMN-NLNNDVAIINHNHVGFNNNIQRINL 414
A I++GGT + + H N N N NN+ N N+ NN I ++
Sbjct: 978 AYIYAGGTATPDTGISEHNDNNNNTNTNNNSDNNNTNNNSDNNTINNYSV 1027
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 331 NMNNLNNDVAIINHNHVGFNNN 396
N NN+NN+ I N+N++ NNN
Sbjct: 238 NNNNINNNNNINNNNNINNNNN 259
>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 313 HLHGSYNMNNLNNDVAIINHNHVGFNNNIQR 405
H +G NN NN+ IIN+N+ NNI++
Sbjct: 24 HNNGHNITNNNNNNNIIINNNNDNSKNNIKK 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,781,391
Number of Sequences: 59808
Number of extensions: 346103
Number of successful extensions: 2264
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2000
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -