Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0385
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 3e-04
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 31 0.56
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 1.3
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 2.3
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.0
SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 28 5.2
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 27 9.1
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 27 9.1
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 199 PSCWTCDRTDEWQNFHL-RSSLLTNTRSVTAAHCWRTMRXHARQFTLALGTANIFSGGTR 375
P W + ++ H+ +SLLT ++TAAHC T+ A +TL G + G
Sbjct: 249 PHSWPWQLSFRYKGSHICGASLLTPGWALTAAHCL-TLSDDASDYTLVAGAHQRENDGQV 307
Query: 376 VTTSNVQMHGSYNMDTLHNDVAIIN-HNHVGFTNNIQRINLAS 501
S ++ H ++M + NDVA++ +V ++ + I L S
Sbjct: 308 FGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICLPS 350
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.9 bits (79), Expect = 0.026
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 238 NFHLRSSLLTNTRSVTAAHCWRTMRXHARQFTLALGTANIFSGGTRVTTSNVQ---MHGS 408
NF SL+++T VTAAHC A Q+ + +G N T NV+ H
Sbjct: 499 NFICGGSLVSSTWVVTAAHCVARSSNPA-QYQIIVGEHNRNVNEVTEETLNVKKVIAHPQ 557
Query: 409 YNMDTLHNDVAII 447
YN L ND+A+I
Sbjct: 558 YNNPRLSNDIALI 570
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 31.5 bits (68), Expect = 0.56
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 184 RWCSPPSCWTCDRTD--EWQNFHLRSSLLTNTRSVTAAHCWRTMRXHARQFTLALGTAN 354
R SPP+ +TC R E +L+SS +S H T R H RQFT++ +N
Sbjct: 278 RTLSPPNAFTCTRLSLPEITRDNLQSSKYL--KSPATIHIPVTTRNHPRQFTVSTSVSN 334
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 SLLTNTRSVTAAHCWRTMRXHARQFTLALGTANIFSGGTR----VTTSNVQMHGSYNMDT 423
SL+ + +TAAHC + R + + LG + T + S + H +YN T
Sbjct: 420 SLIHSNWVLTAAHCISSKRP--AEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRT 477
Query: 424 LHNDVAII 447
++ND+A++
Sbjct: 478 MYNDIALL 485
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 87 TSRSVSPGPRVLDAPRKPL 143
TS P PRVLD+PRKPL
Sbjct: 379 TSLLAYPTPRVLDSPRKPL 397
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 238 NFHLRSSLLTNTRSVTAAHCWRTMRXHARQFTLALGTANIFSG-GTRVT--TSNVQMHGS 408
+F SL++ T VTAAHC H + + G S GT T + H +
Sbjct: 90 SFICGGSLVSPTWVVTAAHCIAGSS-HTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPT 148
Query: 409 YNMDTLHNDVAII 447
YN L ND+A+I
Sbjct: 149 YNSPQLSNDIALI 161
>SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 367 GTRVTTSNVQMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSTTLLVLGP 531
G ++ +N HG + +++++ ++ + +V FT + INL T LV P
Sbjct: 375 GKKIIPNNQSKHGHRKLKRINSNMNLVKYENVSFTMLLIIINLFMCYTVYLVFLP 429
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 70 GLFCHDHGRQRHQYCCEDLHDYY 2
G FCH H R CC+DL Y
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSY 623
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 256 SLLTNTRSVTAAHCWRTMRXH-ARQFTLALGTANIFSGGTRVTTSNVQMHGSY--NMDTL 426
SLL++T +TAAHC +R H +T+ +G GT S H Y D
Sbjct: 343 SLLSSTWVLTAAHC--VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDKK 400
Query: 427 HNDVAII 447
H D+A+I
Sbjct: 401 H-DLALI 406
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = -3
Query: 395 WTLEVVTLVPPEKMLAVPRARVN*RAWXLMVLQQ*AAVTERVLVSKELRRWKFCHSSVRS 216
W+L P + R + AW MVL T RW + +
Sbjct: 34 WSLPWAVAQPRMEEDGPYHGRWHNHAWRKMVLTMGGGTTTHG------ERWSLPWAVAQP 87
Query: 215 QVQQDGGEHQRWRQNHP 165
++++DG H RW NHP
Sbjct: 88 RIEEDGPYHGRW-HNHP 103
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = -3
Query: 395 WTLEVVTLVPPEKMLAVPRARVN*RAWXLMVLQQ*AAVTERVLVSKELRRWKFCHSSVRS 216
W+L P + R + AW MVL T RW + +
Sbjct: 122 WSLPWAVAQPRMEEDGPYHGRWHNHAWRKMVLTMGGGTTTHG------ERWSLPWAVAQP 175
Query: 215 QVQQDGGEHQRWRQNHP 165
++++DG H RW NHP
Sbjct: 176 RIEEDGPYHGRW-HNHP 191
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 394 QMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSTTLLVL 525
Q H N+ ++N+ IIN+N++ NNI N+ + ++++
Sbjct: 384 QQHHHQNI-IINNNNIIINNNNIIINNNINNNNIIINNNNIIII 426
>SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 214 KSSKMGVSTSVGGRTTHNPGTVEVSGFLGASKTLGPG 104
KSSK S+S TTH P V + T GPG
Sbjct: 61 KSSKSSKSSSTSSSTTHGPTPVPATPSSPPRPTPGPG 97
>SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 54 SWQKSPSNSTTTSRSVSPG-PRVLDAP 131
S+ K SNS T S S SPG P VL+ P
Sbjct: 14 SYPKRNSNSHTASNSCSPGDPLVLERP 40
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 238 SAIRQCDHKSSKMGVSTSVGGRTTHNPGTVEVSGF 134
+A R CD +S S TTH G +++GF
Sbjct: 267 AANRDCDDSASSTSDKESAPDETTHASGNTKLTGF 301
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 214 KSSKMGVSTSVGGRT-THNPGTVEVSGFLGASKTLGPGDTDLD 89
KS+++ V G + TH G VEVSG L LG + + D
Sbjct: 1190 KSAQLDVKEGKGYKQLTHQLGLVEVSGLLRCRGRLGNSELEAD 1232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,538,415
Number of Sequences: 59808
Number of extensions: 323610
Number of successful extensions: 1390
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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