Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0385
(616 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62670.1 68418.m07865 ATPase, plasma membrane-type, putative ... 31 0.61
At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1) domain... 30 1.4
At4g30180.1 68417.m04291 expressed protein 29 1.9
At4g13800.1 68417.m02139 permease-related contains 9 predicted t... 29 1.9
At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative ... 29 1.9
At5g57180.2 68418.m07143 expressed protein ; supporting cDNA gi|... 29 3.2
At5g57180.1 68418.m07142 expressed protein ; supporting cDNA gi|... 29 3.2
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 3.2
At5g67370.1 68418.m08495 expressed protein similar to unknown pr... 27 7.5
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 27 7.5
At1g11520.1 68414.m01323 pliceosome associated protein-related c... 27 7.5
At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative ... 27 9.9
At1g60220.1 68414.m06782 Ulp1 protease family protein contains P... 27 9.9
>At5g62670.1 68418.m07865 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2 type
Length = 956
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/95 (25%), Positives = 45/95 (47%)
Frame = -3
Query: 512 VVLPLARLMRWMLLVKPTWLWLMMATSLWRVSML*LPCIWTLEVVTLVPPEKMLAVPRAR 333
V LA+L+ ++ V W + + W + + IW +V +P + + + R
Sbjct: 797 VAFILAQLVATLIAVYANWSFAAIEGIGWGWAGV----IWLYNIVFYIPLDIIKFLIRYA 852
Query: 332 VN*RAWXLMVLQQ*AAVTERVLVSKELRRWKFCHS 228
++ RAW L V++Q A T + KE R ++ H+
Sbjct: 853 LSGRAWDL-VIEQRVAFTRQKDFGKEQRELQWAHA 886
>At5g09620.1 68418.m01113 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein predicted proteins,
Arabidopsis thaliana and Drosophila melanogaster
contains Pfam profile PF00564: PB1 domain
Length = 531
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 427 HNDVAIINHNHVGFTNNIQRINLASGSTTLLVLGPGLPASEGPPMLLREP 576
H D + N G+ + + G + +GP + S GPPM L+EP
Sbjct: 415 HPDAYMEQQNQPGYNVVQPQPTFSGGPQVMTSVGPQVMTSVGPPMGLQEP 464
>At4g30180.1 68417.m04291 expressed protein
Length = 158
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 18 SSQQY*WRWRPWSWQKSPSNSTTTSRSVSPGPRVLDAPRK 137
S+Q++ W S SN TTT+ S S G R+L+ P K
Sbjct: 62 SAQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRILERPDK 101
>At4g13800.1 68417.m02139 permease-related contains 9 predicted
transmembrane domains; contains Pfam PF05653: Protein of
unknown function (DUF803); identified as COG0697,
Permeases of the drug/metabolite transporter (DMT)
superfamily
Length = 336
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 217 HKSSKMGVSTSVGGRTTHNPGTVEVSGFLGASKT 116
HK+ MG STS+ G T+H+P V G+S++
Sbjct: 294 HKTKDMGNSTSLRGSTSHSPRDTPVFINSGSSRS 327
>At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2 type
Length = 960
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = -3
Query: 500 LARLMRWMLLVKPTWLWLMMATSLWRVSML*LPCIWTLEVVTLVPPEKMLAVPRARVN*R 321
LA+L+ ++ V W + + W + + IW ++ +P + + R ++ R
Sbjct: 805 LAQLVATLIAVYANWSFAAIEGIGWGWAGV----IWLYNIIFYIPLDFIKFFIRYALSGR 860
Query: 320 AWXLMVLQQ*AAVTERVLVSKELRRWKFCHS 228
AW L V++Q A T + KE R ++ H+
Sbjct: 861 AWDL-VIEQRVAFTRQKDFGKEQRELQWAHA 890
>At5g57180.2 68418.m07143 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 435
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 69 PSNSTTTSRSVSPGPRVLDAPRKPL 143
PS+STTT+R+ SP + ++ PL
Sbjct: 27 PSSSTTTTRATSPSSTISESSNSPL 51
>At5g57180.1 68418.m07142 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 424
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 69 PSNSTTTSRSVSPGPRVLDAPRKPL 143
PS+STTT+R+ SP + ++ PL
Sbjct: 27 PSSSTTTTRATSPSSTISESSNSPL 51
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 361 SGGTRVTTSNVQMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSTTLLVLGPG 534
+G + +V + YN+ TLH V I + + IN +SGST+L V G
Sbjct: 42 TGTKSMEDDDVSLSLLYNLSTLHEKVHQIQSLVSFYMVSTNNINQSSGSTSLAVANIG 99
>At5g67370.1 68418.m08495 expressed protein similar to unknown
protein (gb|AAC18972.1)
Length = 327
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 154 YQDCGWFCRQRWCSPPSCWTCDR 222
Y++ GW+ Q W PP DR
Sbjct: 185 YEESGWYDGQMWVKPPEVLARDR 207
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 530 LGCRLRKDLRCCFGSQQPTKTPSEPP 607
L C KDLR CF P P PP
Sbjct: 10 LSCLQFKDLRFCFRQYPPPPPPPPPP 35
>At1g11520.1 68414.m01323 pliceosome associated protein-related
contains similarity to spliceosome associated protein
SAP 145 GI:1173904 from [Homo sapiens]
Length = 196
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 600 SLGVFVGCWLPKQHRRSFRSRQPRPKYQQSCASTG*VDALDV 475
S+ V LPK+ R R R+ R + +++ AS VDA+DV
Sbjct: 48 SIVAHVDSVLPKKSREIDRRRRRRKRKKKNKASQADVDAMDV 89
>At3g42640.1 68416.m04431 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H+-ATPase from [Lycopersicon esculentum] GI:1621440,
[Solanum tuberosum] GI:435001, SP|Q03194 {Nicotiana
plumbaginifolia}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 948
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -3
Query: 398 IWTLEVVTLVPPEKMLAVPRARVN*RAWXLMVLQQ*AAVTER 273
IW ++T +P + + + R + +AW M+ Q+ A T++
Sbjct: 826 IWVYSIITYIPLDILKFIIRYALTGKAWDNMINQKTAFTTKK 867
>At1g60220.1 68414.m06782 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 604
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 45 RPWSWQKSPSNST 83
R WSW+KSPS S+
Sbjct: 302 REWSWEKSPSQSS 314
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,069,209
Number of Sequences: 28952
Number of extensions: 210542
Number of successful extensions: 797
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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