Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0384
         (470 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0400 + 3017898-3017980,3018785-3018869,3019686-3019775,301...    29   1.4  
08_02_1550 - 27818271-27818618,27818743-27818955,27819079-278195...    27   5.8  
07_03_1013 + 23299569-23300630                                         27   7.6  
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    27   7.6  
03_01_0283 + 2193632-2195182                                           27   7.6  

>11_01_0400 +
           3017898-3017980,3018785-3018869,3019686-3019775,
           3019896-3019928
          Length = 96

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 110 VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDY 253
           VDP++ L E C  KP       +Y++C  RV       + C  +  DY
Sbjct: 34  VDPKKYLEERC--KPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDY 79


>08_02_1550 -
           27818271-27818618,27818743-27818955,27819079-27819597,
           27820239-27820357,27820457-27820763,27820840-27820922,
           27821027-27821204,27821328-27821401,27822078-27822293,
           27822724-27822757
          Length = 696

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 122 QSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYAMFLTNASPRTC 289
           +S  E+   K     +WA     N +++S  + A+  EE    + +F  NAS + C
Sbjct: 463 KSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQFC 518


>07_03_1013 + 23299569-23300630
          Length = 353

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +2

Query: 110 VDPQQSLREECSQKPDAQNMWAKYQECNDRV-NSRSKTAETCEEE 241
           +D  Q   ++C  +  A N +        +  +   KTAE CEEE
Sbjct: 173 LDEDQKTLQQCQDEEKAPNQYEDEDNTTGQYQDGEQKTAEQCEEE 217


>03_05_1143 + 30709825-30709926,30710105-30710260,30710356-30710439,
            30710769-30710882,30711019-30711111,30711888-30711977,
            30712157-30712227,30712300-30712374,30712481-30712568,
            30712748-30712806,30712893-30712956,30713030-30713095,
            30713283-30713435,30713522-30713626,30713739-30713974,
            30714104-30714173,30714286-30714339,30714501-30714557,
            30714662-30714741,30716056-30717919
          Length = 1226

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 146  QKPDAQNMWAKYQECNDRVNSRSKTAETCEEEL 244
            ++ D   +   YQEC  +VN + +    CEE L
Sbjct: 1122 EQKDMDCLLVDYQECVFKVNLKEEKIRACEESL 1154


>03_01_0283 + 2193632-2195182
          Length = 516

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 161 QNMWAKYQECNDRVNSRSKTAETCEEELIDYAMFLTNASPRTCL 292
           + +W K  +C + +  R  T+E        Y  F  NA PRTCL
Sbjct: 418 EGVWGK--DCTEFLPERWITSEGKLRYEPSYKFFSFNAGPRTCL 459


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,716,676
Number of Sequences: 37544
Number of extensions: 153544
Number of successful extensions: 299
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)