Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0383
(707 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 43 2e-04
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 40 0.002
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 38 0.006
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 38 0.006
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 36 0.024
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 35 0.056
SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20) 35 0.074
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 31 0.92
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.6
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.6
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 30 1.6
SB_40127| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-06) 30 2.1
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 30 2.1
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 4.9
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24) 28 8.5
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTR--VVPGEENVNTGPCNCD 200
+C+ F MCS+G + CPSNL + P CEW+ V+CG R + P T P
Sbjct: 531 NCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDCGQRPTISPHPPKPTTMPPQPT 590
Query: 201 PKQALSLCAQEGSNGKLVPIMCVATITCAS 290
P ++ C ++ + P C ITC++
Sbjct: 591 PPKS-PFCEEKKNGDYADPSNCNGFITCSN 619
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPK 206
+C+ F CS+G CP NL F CEW V C +R P T P P
Sbjct: 610 NCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSR--PTTVPYVTKP--TPPS 665
Query: 207 QALSLCAQEGSNGKLVPIMCVATITCASAVKHYHSLVR-LIFSMILKRND 353
C + G+ P C+ I C ++ + R L F+ + KR D
Sbjct: 666 GNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCD 715
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 260 NVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGR 388
N C+ + MC +G + CPSNL YDP K RC++ V C R
Sbjct: 530 NNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDCGQR 572
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +3
Query: 30 CDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQ 209
C+ F CS+ + CP NL F+P T+ C+ +NV+CG P P P
Sbjct: 457 CEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPP---TPKVPPTTKAPFT 513
Query: 210 ALSLCAQEGSNGKLVPI-MCVATITCASAVKHY 305
C + NGK C + C++ +Y
Sbjct: 514 KSPFCVGK-QNGKYADANNCNGFVMCSNGYIYY 545
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 224 CSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPV- 400
C+ R + + C + C + T + CP NL ++P + CD P NV C P
Sbjct: 443 CAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPPTP 502
Query: 401 FLPPLNK 421
+PP K
Sbjct: 503 KVPPTTK 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPVFLPPLNK 421
C+ + C +G CP NL +D +K C++P V+C+ R P +P + K
Sbjct: 611 CNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSR--PTTVPYVTK 660
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGR 388
C + MC +G T + CP +DP K+RC+ + C GR
Sbjct: 392 CHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE---DYDCSGR 429
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/93 (24%), Positives = 38/93 (40%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPK 206
+C F MCS+G+ + CP F P + CE + +C R V + N G
Sbjct: 391 NCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE---DYDCSGRDVAYLTDQNDG------- 440
Query: 207 QALSLCAQEGSNGKLVPIMCVATITCASAVKHY 305
CA+ P C I+C++ + ++
Sbjct: 441 ---GFCAERSDGDYQDPDACEGFISCSNHITYH 470
Score = 34.3 bits (75), Expect = 0.098
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 224 CSRRFERQTCTHNVCSHYHMCVSGKTLSLA-CPSNLFYDPQKERCDFPANV-SCEG 385
C+ R + + C+ Y C +G T++ CP+ L ++ CD+P+NV C G
Sbjct: 316 CTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSG 371
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 257 HNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEG 385
HN C Y +C G C L ++ +RCD P NV C G
Sbjct: 683 HN-CLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKCAG 724
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPG 164
+G V +C+ F CS+ CPSNL F+ E++K E G R+ G
Sbjct: 736 DGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKKDWAEYNKTGERGYRLAGG 789
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
+C + +C GN C L F+ +T+ C+ +NV+C
Sbjct: 684 NCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLK-CPSNLFFSPITQTCEWSKNV 137
+G +C+ + CS+G + + CP+ L F+ C++ NV
Sbjct: 321 DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 221 MCSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEG 385
+C R + + C Y C +G + CP+ L ++ +K+ CD+P N CEG
Sbjct: 85 ICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPCEG 139
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 21 HEDCDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
H D K Y+ CS+G + CP+ L ++ + C+W N C
Sbjct: 96 HPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
+G+ E+C F +C G CP L F+ C+WS V+C
Sbjct: 463 DGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVECG-TRVVPGEENVNTGPCN-- 194
DC KFY C + + L +CP+ L +S C+W + V+C T P +T
Sbjct: 901 DCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCDRTTSTPPTPTTHTPTIKPA 960
Query: 195 CDPK-QALSL--CAQEGSNGKLVPIMCVATITC 284
CD Q L+L N ++V MCV T C
Sbjct: 961 CDLHCQTLNLDGTCTVMPNYQVVNGMCVDTTFC 993
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDP 203
DC +FY C + + L +C L +S TC+W +NV+C R P + P P
Sbjct: 796 DCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDC-DRKTPTPPSPT--PPTTTP 852
Query: 204 KQALSLCAQ 230
K A L Q
Sbjct: 853 KPACDLHCQ 861
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 24 EDCDKFYMC-SSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVP 161
+DC +FY C S + +CP L +S + +TC++ V+C P
Sbjct: 580 KDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVEC 143
DC +FY C + + L +CP+ L +S TC+W + V+C
Sbjct: 1006 DCSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDC 1045
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVECGTRVVP----GEENVNTGPC 191
DC +FY C + + L +CP L +S C+ V+C R +P G + + P
Sbjct: 1356 DCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDC-DRTIPTVATGLPSPSPSPP 1414
Query: 192 NCDPKQALSLCAQE---------GSNGKLVPIMCVATITCASAVKHYH 308
PK A L Q S K+V MCV T C Y+
Sbjct: 1415 TPTPKPACDLHCQTLNLDGTCTVASGYKVVNEMCVDTSFCKDKTSDYY 1462
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVEC 143
DC +FY C + + L +CP+ L +S C+W + V+C
Sbjct: 1151 DCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC 1190
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVEC 143
DC +FY C + + L +CP+ L +S C+W + V+C
Sbjct: 1251 DCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 1290
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 266 CSHYHMC-VSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPV 400
CS ++ C S KT CP L + +K CD P V C+ + V
Sbjct: 1357 CSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDCDRTIPTV 1402
Score = 34.3 bits (75), Expect = 0.098
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 CSHYHMCV-SGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAP 397
C+ ++ C S ++L CP L + K+ CD+P V C P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCE 382
CS ++ C + KT CP+ L + +K CD+P V C+
Sbjct: 1152 CSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDCD 1191
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 266 CSHYHMC-VSGKTLSLACPSNLFYDPQKERCDFPANVSC 379
CS + C + + +CP L ++ +K CD P NV+C
Sbjct: 1468 CSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 382
CS ++ C + L CP+ L + +K CD+P V C+
Sbjct: 1007 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDCD 1046
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 382
CS ++ C + L CP+ L + +K CD+P V C+
Sbjct: 1252 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCD 1291
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLK-CPSNLFFSPITQTCEWSKNVECGTRVVPG 164
DC K+Y C + V + CP+ ++ + + C+ + V C PG
Sbjct: 80 DCFKYYHCDGYDDVRWRSCPTGQLWNHVNKKCDRADLVICDRDATPG 126
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 382
CS ++ C + L CP+ L + +K CD+P V C+
Sbjct: 902 CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCD 941
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVSCE 382
CS ++ C + L C L + K CD+P NV C+
Sbjct: 797 CSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCD 836
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEE 170
+G +DC +Y C G CP L F+ + ++C+ V C T+ EE
Sbjct: 233 DGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNCVTKQRDEEE 288
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 379
CS Y+ C G++ CP L ++ + CD P+ V+C
Sbjct: 242 CSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNC 279
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVEC 143
+C +FY C + + L CPS L +S TC+W + V+C
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 34.7 bits (76), Expect = 0.074
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPVFLPPLNKHL 427
CS ++ C + K +CPS L + K CD+P V C+ + + PP +L
Sbjct: 129 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD--IGGAYKPPFRCNL 181
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 GVLVAHEDCDKFYMCSSGNPVTLK-CPSNLFFSPITQTCEWSKNVEC 143
G V +DC K+Y C + + C L +S + C+ + +V+C
Sbjct: 28 GCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDC 74
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCE 382
CS Y+ C KT C L + K CD A+V C+
Sbjct: 36 CSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDCD 75
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTL-KCPSNLFFSPITQTCEWSKNVEC 143
+C +FY C + + L CPS L +S TC+W + V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 34.7 bits (76), Expect = 0.074
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPVFLPPLNKHL 427
CS ++ C + K +CPS L + K CD+P V C+ + + PP +L
Sbjct: 36 CSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDCD--IGGAYKPPFRCNL 88
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 21 HEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
++ C F C + N CP L ++ T+ C+W +NV+C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 257 HNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 379
++ C + C + CP L Y+ + ++CD+P NV C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 224 CSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCE 382
C +R C Y C + T CP+ L ++ K+ CD+P N CE
Sbjct: 62 CKKRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCE 114
Score = 34.7 bits (76), Expect = 0.074
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 18 AH-EDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
AH E+C + CS+ +CP+ L ++ + C+W KN C
Sbjct: 71 AHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPC 113
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAP 397
C HY+ C GK + C +DP+ C++ C G AP
Sbjct: 37 CQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAP 80
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/55 (23%), Positives = 18/55 (32%)
Frame = +3
Query: 30 CDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCN 194
C +Y C+ G V C + P C W +C P + T N
Sbjct: 37 CQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAPSVDTYMTSTNN 91
>SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20)
Length = 772
Score = 34.7 bits (76), Expect = 0.074
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 30 CDKFYMCSSGNPVT-LKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENV--NTGPCNCD 200
CD + C G+ T +CPSN+F P S GT++ G+++ NT NC
Sbjct: 110 CDGDFACVDGSDETRCECPSNMFLCP-------SGECIMGTQLCDGKKDCTDNTDEKNCA 162
Query: 201 PKQALSLCAQEGSNGKLVP 257
K LC ++ G ++P
Sbjct: 163 HKTE-CLCVRQSFKGSVIP 180
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 30 CDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPK 206
CD + CS+G + CP+ L ++ +T+ C+ + P + + + N PK
Sbjct: 350 CDMYITCSNGIAHEMPCPAGLNWNDVTKECDGRATL----LAKPSDRFIKSDSANLSPK 404
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 GVLVAHEDCDKFYMCSSGNPVTLK-CPSNLFFSPITQTCEWSKNVEC 143
G V +DC K+Y C + + C L +S + C+ + +V+C
Sbjct: 10 GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 56
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCE 382
CS Y+ C KT C L + K CD A+V C+
Sbjct: 18 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCD 57
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 GVLVAHEDCDKFYMCSSGNPVTLK-CPSNLFFSPITQTCEWSKNVEC 143
G V +DC K+Y C + + C L +S + C+ + +V+C
Sbjct: 77 GCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 123
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 CSHYHMCVS-GKTLSLACPSNLFYDPQKERCDFPANVSCE 382
CS Y+ C KT C L + K CD A+V C+
Sbjct: 85 CSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDCD 124
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNL-FFSPITQTCEWSKNVEC 143
DC KFY C + + S++ +S + TC+ +KNV+C
Sbjct: 42 DCAKFYQCDGFHRTFHRMCSDVPKWSVMKSTCDHAKNVDC 81
>SB_40127| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-06)
Length = 266
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 51 SSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPG-EENVNTGPCNCDPKQALSLCA 227
S NPV C ++ F I Q K + G R G EE G C+ PK S
Sbjct: 184 SPANPVIYCCRNHAFRLAIQQMVFRKKGIRKGKRENKGKEEGKKEGKCHEKPKGVESGPT 243
Query: 228 QEGSN 242
EG+N
Sbjct: 244 LEGTN 248
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 224 CSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQ-KERC-DFPANVSC 379
CS ++ T +VC H C G L CP+ + D + C D P+ C
Sbjct: 1951 CSALYDIHTGIGDVCPTGHYCPIGSARPLGCPAGSYQDNKGMSHCKDCPSGYFC 2004
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 263 VCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGR 388
VC H C +G T + CPS +Y + + + EG+
Sbjct: 30 VCVRGHYCPAGTTREIPCPSGTYYPDEGAKAVGDCRLCDEGK 71
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 366 LMSAAKAVLHQCSYPHSTNIWKHDKTSDTTFKGLYEKL 479
L + +L+ CS PHS +IW D + F+ + EKL
Sbjct: 1153 LFHESDPILNSCSKPHSLSIWIRD---ELIFQKMKEKL 1187
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 30 CDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCN-CDPK 206
C+K Y S N T+ P P TC W+ T +V + + P + CD
Sbjct: 389 CNKRYTFLSNNSFTITSPLWPSSPPSNTTCNWAIESSPNTYLVFQVQEIEVNPSSPCDHY 448
Query: 207 QALSLCAQEGS 239
+ L + E S
Sbjct: 449 LSFRLSSGEKS 459
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDP-QKERCDF-PANVSCEGR 388
C+ H C G + + CPS + D QK+ C P C+ +
Sbjct: 266 CTKGHYCPKGTSAPVKCPSGSYQDELQKDSCKVCPEGHFCDNK 308
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLF 95
DC + C SG P+ + CP+ F
Sbjct: 1737 DCAAGHYCPSGTPIEVPCPTGTF 1759
>SB_17539| Best HMM Match : Cu2_monoox_C (HMM E-Value=1e-24)
Length = 723
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +3
Query: 180 TGPCNCDPKQALSLCAQEGSNGKLVPIMCVATITCASAVKHYHSLVRLIFSMILKRNDAI 359
T + D + S S P+ C +I CASAV + L+R + S +
Sbjct: 241 TSDLDTDYSEWFSFTGDSSSPDHSKPLDCHRSICCASAVPNLFVLIRQMNSSTSESVKFG 300
Query: 360 FLLMSAAKAVLHQ 398
L +AA VL Q
Sbjct: 301 AALTAAAPVVLRQ 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,815,926
Number of Sequences: 59808
Number of extensions: 434826
Number of successful extensions: 1132
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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