Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0383
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 36 0.028
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 36 0.028
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.050
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.050
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.050
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 34 0.11
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 29 4.3
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 29 4.3
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 29 4.3
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 29 4.3
U41528-1|AAK39166.1| 155|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 28 7.5
U41545-2|ABN43094.1| 176|Caenorhabditis elegans Hypothetical pr... 28 7.5
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 28 7.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 7.5
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 7.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 9.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.9
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 15 VAHEDCDK-FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTR 152
++ +C F+ CS G CP+NL F+P +C+W KNV +C +
Sbjct: 185 ISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 36 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEENVNTG 185
+F C SG + CP +L + + C+W NV ECG GEEN +G
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE---GEENEFSG 88
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 143
F C++G P+ + CP L FS Q C++ NV EC
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 35.5 bits (78), Expect = 0.038
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Frame = +3
Query: 27 DCD-KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSK-NVEC--GTRVVPGEENVNTGPCN 194
DC + C +G +CP +L F+ + C++ + +++C ++ + ++ T C+
Sbjct: 321 DCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDALLIRDASIGTYDCS 380
Query: 195 CDPKQALSLCAQ---EGSNGKLVPIMCVAT--ITCASAVK 299
D + +LC++ + SNG+L+P C + + ASA K
Sbjct: 381 IDGLFSSTLCSRNYHKCSNGQLIPHECADSNAVFSASAAK 420
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 143
+GV + + +C+SG+P L C + L + P + C W + EC
Sbjct: 124 DGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDEC 171
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 CSH-YHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
CS+ + C G CP+NL ++P CD+P NV
Sbjct: 190 CSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNV 226
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 284 CVSGKTLSLACPSNLFYDPQKERCDFPANV 373
CVSG+ + CP +L Y E CD+ NV
Sbjct: 45 CVSGEARYMDCPEDLVYHKNLEFCDWRHNV 74
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDF 361
S Y +C SG L+C + L YDP ++C +
Sbjct: 134 SSYIICNSGSPRFLSCSTPLIYDPTNKKCSW 164
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
S + C +G + + CP L + + + CD+ NV
Sbjct: 253 SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNV 287
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 137
FY+C++G V CP+NL F+P C++S NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV-SCEG 385
S +++C +G+ ++ CP+NL ++P CD+ NV C+G
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDYSTNVRDCQG 628
Score = 35.9 bits (79), Expect = 0.028
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 27 DCDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 140
DC+ +Y+ C++ +CP+ LF+S + C++ ++VE
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVE 837
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 24 EDCDK-FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 140
E C K F+ C G CP +L F+ T TC++++N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPVFLPPLNKHLEARQN 442
C Y + C + KT CPS L+Y +++CD NV EG P + P + A Q
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENV--EG--CPEYKPTTDATPAAEQP 756
Query: 443 IRHY 454
+ Y
Sbjct: 757 VISY 760
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 254 THNV-CSHYH-MCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
T NV CS Y C +GK CP L Y + CDFP +V
Sbjct: 212 TDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESV 253
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 VCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRV 391
VC+ +Y+ C +G + CP Y P +RCD+ N + G V
Sbjct: 126 VCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCNASGGV 169
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 27 DCDKFYM-CSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 140
DC+K+ + C + CPS L++S + C+ +NVE
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFP 364
S+Y C+ + ++CP++L + + E+C FP
Sbjct: 969 SYYFSCIDEQIRKMSCPNSLKFSKESEKCVFP 1000
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 CSHYHM-CVSGKTLSLACPSNLFYDPQKERCDFPANV 373
C Y++ C + +T CP+ LFY RCD+ +V
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHV 836
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 33 DKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKN 134
+ +Y C++G KCP + PI + C++ N
Sbjct: 129 ENYYQCANGISYMRKCPYQQVYVPILKRCDYHTN 162
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +2
Query: 218 FMCSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
F CS R + Y C+ G++L +C LFY+ + C + V
Sbjct: 887 FSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTV 938
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 263 VCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPA-NVSCEGRVAP 397
+CS HY +C +G+ S C + L Y+ + C++ + N C P
Sbjct: 1036 MCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDCGNDYIP 1082
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 233 RFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCE 382
++ ++ CT + + C G+ + CP +L ++ CDF N CE
Sbjct: 440 KYIKEACTKS----FFTCHDGRAFANDCPGDLVFNKATGTCDFAEN--CE 483
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 27 DCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEENVNTGPCNCD 200
+C+ FY C G V + CPS F+P+ C+W V C + + + N D
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQASDSNSSYGSSTYNDD 1315
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 260 NVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV-SCEGRVA 394
N C ++ CV G+ + + CPS ++P CD+P+ V SC G+ +
Sbjct: 1256 NNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQAS 1301
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 36 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTR 152
K+ CS+G + +C +L+F+ TQ C + V ECG++
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 33 DKFYMCSSGNPVTLKCPSNLFFSPITQTCEWS 128
++F C +G KCP +L F+ TQ C S
Sbjct: 113 NQFISCVAGGAYMAKCPDSLVFNERTQDCRES 144
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/83 (24%), Positives = 31/83 (37%)
Frame = +3
Query: 33 DKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQA 212
D FY CS+ CP F+ Q+C++ + T V + T P D + +
Sbjct: 207 DVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTDDPTTTVSYSTSTITTPQEDDSEYS 266
Query: 213 LSLCAQEGSNGKLVPIMCVATIT 281
+ A S I + T T
Sbjct: 267 STTSADVISTTTTPSIDAIETTT 289
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSL-ACPSNLFYDPQKERCDFPANVS-CE 382
CS C G+ +C S+L ++ +CD+P VS CE
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCE 1236
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVP 161
F CS G + CP++L F+P C+W ++V EC P
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEEN 173
F C++G + + CP+ L FS T C++ NV EC + GEE+
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEES 367
Score = 34.3 bits (75), Expect = 0.087
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 376
S + C +G+ + + CP+ L + RCD+ +NVS
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 LVAHEDCD-KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 137
L A +C+ +F CS G + CP++L ++ C+W NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERC 355
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 HNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS-CEGRVAP 397
+ VCS ++ C G + CP++L ++P CD+P +V+ C G P
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 140
++ C++ L CP+ LF+ +Q C W VE
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 48 CSSGNPVTLKCPSNLFFSPITQTCEWSK-NVEC--GTRVVPGEENVNTGPCNCDPKQALS 218
C +G+ +CPS+L F+ + C++ + +++C ++ E + C+ D +
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTILIDETPIAAFDCSTDGLFSDG 481
Query: 219 LCA---QEGSNGKLVPIMCVATITCASA 293
LC+ + + G+L+ C A+ SA
Sbjct: 482 LCSATYHQCTAGQLINFTCAASNAVFSA 509
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVP 161
F CS G + CP++L F+P C+W ++V EC P
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECGTRVVPGEEN 173
F C++G + + CP+ L FS T C++ NV EC + GEE+
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC--QETSGEES 367
Score = 34.3 bits (75), Expect = 0.087
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS 376
S + C +G+ + + CP+ L + RCD+ +NVS
Sbjct: 322 SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVS 357
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 LVAHEDCD-KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV 137
L A +C+ +F CS G + CP++L ++ C+W NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 31.9 bits (69), Expect = 0.46
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 269 SHYHMCVSGKTLSLACPSNLFYDPQKERC 355
++Y C + L+CP+ LFYD ++C
Sbjct: 153 TYYFFCTTNTARFLSCPTPLFYDADSQKC 181
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 HNVCS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVS-CEGRVAP 397
+ VCS ++ C G + CP++L ++P CD+P +V+ C G P
Sbjct: 257 NGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 39 FYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVE 140
++ C++ L CP+ LF+ +Q C W VE
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVE 188
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 48 CSSGNPVTLKCPSNLFFSPITQTCEWSK-NVEC--GTRVVPGEENVNTGPCNCDPKQALS 218
C +G+ +CPS+L F+ + C++ + +++C ++ E + C+ D +
Sbjct: 422 CQNGHVDIFECPSSLVFNDQSLICDYPQTSLKCLIEDTILIDETPIAAFDCSTDGLFSDG 481
Query: 219 LCA---QEGSNGKLVPIMCVATITCASA 293
LC+ + + G+L+ C A+ SA
Sbjct: 482 LCSATYHQCTAGQLINFTCAASNAVFSA 509
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 36 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 146
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV-SCEG 385
CS + C G + + CP++L YDP+ C++ NV C G
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG 115
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 36 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 146
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
CS HY C +G + + CP+ L +D + CD+ NV
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERC 355
CS HY CV+G+ C + LF+ P++ RC
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC 567
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV-SCEG 385
CS + C G + + CP++L YDP+ C++ NV C G
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG 115
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 24 EDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 143
E D + CS+G + ++CP+ L F C++ NV EC
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 36 KFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-ECG 146
+F CS G + CP++L + P CE+S NV +CG
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCG 114
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV 373
CS HY C +G + + CP+ L +D + CD+ NV
Sbjct: 227 CSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNV 263
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERC 355
CS HY CV+G+ C + LF+ P++ RC
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARC 567
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 266 CS-HYHMCVSGKTLSLACPSNLFYDPQKERCDFPANV-SCEG 385
CS + C G + + CP++L YDP+ C++ NV C G
Sbjct: 74 CSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQCGG 115
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 24 EDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNV-EC 143
E D + CS+G + ++CP+ L F C++ NV EC
Sbjct: 226 ECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 221 MCSRRFERQTCTHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 379
+CS + + N C + +C+S K+ S++CPS L Y + C C
Sbjct: 480 VCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGC 532
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 3 EGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVEC 143
+G DC KF C +G +CP+ L F T C+ +C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 266 CSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSC 379
C + CV+G + + CP+ L + CD P C
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Frame = +3
Query: 27 DCDKFYMCSSG---NPVT--LKCPSNLFFSPITQTC-EWSKNVECGT--RVVPGEENVNT 182
+C+K C G +P+T CP+ L + C E S C + V G+ + T
Sbjct: 513 NCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKET 572
Query: 183 GPCNCDPKQALSLCAQEGSNGKLVPIMCVATITCASA 293
G C C P S C+ S GK C + C+ A
Sbjct: 573 GECTCQPGFFGSDCSTTCSKGKYGE-SCELSCPCSDA 608
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Frame = +3
Query: 27 DCDKFYMCSSG---NPVT--LKCPSNLFFSPITQTC-EWSKNVECGT--RVVPGEENVNT 182
+C+K C G +P+T CP+ L + C E S C + V G+ + T
Sbjct: 513 NCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKET 572
Query: 183 GPCNCDPKQALSLCAQEGSNGKLVPIMCVATITCASA 293
G C C P S C+ S GK C + C+ A
Sbjct: 573 GECTCQPGFFGSDCSTTCSKGKYGE-SCELSCPCSDA 608
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Frame = +3
Query: 27 DCDKFYMCSSG---NPVT--LKCPSNLFFSPITQTC-EWSKNVECGT--RVVPGEENVNT 182
+C+K C G +P+T CP+ L + C E S C + V G+ + T
Sbjct: 513 NCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKET 572
Query: 183 GPCNCDPKQALSLCAQEGSNGKLVPIMCVATITCASA 293
G C C P S C+ S GK C + C+ A
Sbjct: 573 GECTCQPGFFGSDCSTTCSKGKYGE-SCELSCPCSDA 608
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 28.7 bits (61), Expect = 4.3
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Frame = +3
Query: 27 DCDKFYMCSSG---NPVT--LKCPSNLFFSPITQTC-EWSKNVECGT--RVVPGEENVNT 182
+C+K C G +P+T CP+ L + C E S C + V G+ + T
Sbjct: 513 NCEKRCKCPKGIGCDPITGECTCPAGLQGANCDIGCPEGSYGPGCKLHCKCVNGKCDKET 572
Query: 183 GPCNCDPKQALSLCAQEGSNGKLVPIMCVATITCASA 293
G C C P S C+ S GK C + C+ A
Sbjct: 573 GECTCQPGFFGSDCSTTCSKGKYGE-SCELSCPCSDA 608
>U41528-1|AAK39166.1| 155|Caenorhabditis elegans Hypothetical
protein C15C7.4 protein.
Length = 155
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 165 EENVNTGPCNCDPKQALSLCAQEGSNGKLVPI-MCVATITCASAVKHYHSLVRLIFS-MI 338
++ V+ CN + K + A EG N K P+ C + +AV ++ + IFS I
Sbjct: 92 DDGVSKDFCNDECKVEVKSYAAEGDNVKKYPVAFCCCRSSHCNAVSKVSNIFKFIFSKQI 151
Query: 339 LKRN 350
L R+
Sbjct: 152 LPRH 155
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical protein
F22E10.3 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 423 IWKHDKTSDTTFKGLYEKLLG 485
I++ DK+SD TFKG+ +LG
Sbjct: 1017 IYQGDKSSDDTFKGIIAMMLG 1037
>U41545-2|ABN43094.1| 176|Caenorhabditis elegans Hypothetical
protein C02F12.5 protein.
Length = 176
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 245 QTCTHNVCSHYHMCVSGKTLSLAC 316
++C+HN C CV GK + C
Sbjct: 152 RSCSHNFCPEKSTCVQGKWTAYCC 175
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 423 IWKHDKTSDTTFKGLYEKLLG 485
I++ DK+SD TFKG+ +LG
Sbjct: 1017 IYQGDKSSDDTFKGIIAMMLG 1037
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Frame = +3
Query: 27 DCDKFYMCS-SGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVN---TGPCN 194
DC K GN CP+ F Q C C P + V TG C
Sbjct: 780 DCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKCS------CADVASPHKSKVCHHVTGTCT 833
Query: 195 CDPKQALSLCAQEGSNGKLVPIMCVATITCASAVK 299
C P + LC Q + P C T +C + K
Sbjct: 834 CLPGKTGPLCDQSCAPNTYGP-NCAHTCSCVNGAK 867
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Frame = +3
Query: 27 DCDKFYMCS-SGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVN---TGPCN 194
DC K GN CP+ F Q C C P + V TG C
Sbjct: 780 DCTKKCPAGYQGNLCDQPCPAGYFGYDCEQKCS------CADVASPHKSKVCHHVTGTCT 833
Query: 195 CDPKQALSLCAQEGSNGKLVPIMCVATITCASAVK 299
C P + LC Q + P C T +C + K
Sbjct: 834 CLPGKTGPLCDQSCAPNTYGP-NCAHTCSCVNGAK 867
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 117 CEWSKNVECGTRVVPGEENVNTGPCNCDP 203
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 117 CEWSKNVECGTRVVPGEENVNTGPCNCDP 203
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 117 CEWSKNVECGTRVVPGEENVNTGPCNCDP 203
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 117 CEWSKNVECGTRVVPGEENVNTGPCNCDP 203
C+ + CGT + NV G C C P
Sbjct: 2031 CQGCQGCHCGTAAFNTQCNVENGQCTCRP 2059
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,631,892
Number of Sequences: 27780
Number of extensions: 340211
Number of successful extensions: 979
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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