Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0383
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    26   0.30 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    26   0.30 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   6.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.6  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   8.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +3

Query: 102 PITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 227
           PI +  E  K VEC        EN  +  CN   KQ   L A
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +3

Query: 102 PITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCA 227
           PI +  E  K VEC        EN  +  CN   KQ   L A
Sbjct: 206 PIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA 247


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 194 VTRTSIDVFLTWND 153
           +TR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 194 VTRTSIDVFLTWND 153
           +TR S+D F T ND
Sbjct: 557 ITRNSLDCFFTMND 570


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -1

Query: 596 LHRLKNFVKYLTVLPTI*YL*TNEMQHNFI 507
           LH++KN + Y  VL    +  T ++ H+ +
Sbjct: 281 LHKMKNIIDYYLVLENTDH--TKQLSHDVL 308


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +2

Query: 389 VAPVFLP-----PLNKHLEARQNIRHYF 457
           +AP FL      P  KH+E  + IR+Y+
Sbjct: 367 IAPYFLDYNYTIPKEKHVEVARLIRNYY 394


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = +2

Query: 389 VAPVFLP-----PLNKHLEARQNIRHYF 457
           +AP FL      P  KH+E  + IR+Y+
Sbjct: 367 IAPYFLDYNYTIPKEKHVEVARLIRNYY 394


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 183 GPCNCDPKQALSLCAQEGSNGKLVPIMCVA 272
           G C C   Q+++LC      G L P M ++
Sbjct: 181 GSCKCIYVQSINLCMAGRLFGYLCPGMALS 210


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 112 WVIGLKNKFEGHLRVTGFPDEH 47
           W +G KN   G +  + F DE+
Sbjct: 43  WSVGKKNSNSGTINESEFNDEN 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,849
Number of Sequences: 438
Number of extensions: 4058
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)