Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0380
         (775 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562...    35   2.6  
UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n...    33   6.0  
UniRef50_Q2NJ91 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_Q7QPV4 Cluster: GLP_433_7606_11109; n=1; Giardia lambli...    33   7.9  

>UniRef50_A6NLZ5 Cluster: Uncharacterized protein ENSP00000371562;
           n=3; Eukaryota|Rep: Uncharacterized protein
           ENSP00000371562 - Homo sapiens (Human)
          Length = 162

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
 Frame = +3

Query: 198 YT-VCICM*VYLFL-----LYILIAVHFPKYLLACLEL--HF*M*FF*NLCMYI*NVHKL 353
           YT +C+C+ +Y+++     ++I +  +  KY+  C+ +  H  M  +  +CMYI  ++  
Sbjct: 29  YTYMCVCVRIYIYVCMRTYIHICVYAYVYKYMCVCVRIYIHTCMYIYTYICMYIMCIYVR 88

Query: 354 TG*QINELNCKYICKY 401
           T   +    C +IC Y
Sbjct: 89  TYIYVYICTCIHICVY 104


>UniRef50_UPI0000DBFE1A Cluster: UPI0000DBFE1A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFE1A UniRef100 entry -
           Rattus norvegicus
          Length = 164

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 17/66 (25%), Positives = 35/66 (53%)
 Frame = +2

Query: 140 YVTLNNYIFKHTKTMTAQHVYSMYMYVGIPIPIIHTNCCTFSKISARLFGTTFLNVVLLE 319
           Y+  + YI  HT T T  H Y +Y+Y+ +    ++    T++ I   ++   ++ V +  
Sbjct: 1   YIHTHIYIHTHTYTYTHIHTY-LYLYIDV---CLYMKAHTYAYIEGCVYVYVYVYVYVYV 56

Query: 320 FMYVYL 337
           ++YVY+
Sbjct: 57  YVYVYV 62


>UniRef50_Q2NJ91 Cluster: Putative uncharacterized protein; n=1;
           Aster yellows witches'-broom phytoplasma AYWB|Rep:
           Putative uncharacterized protein - Aster yellows
           witches'-broom phytoplasma (strain AYWB)
          Length = 131

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -1

Query: 241 YNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKLIALLFTCFF 101
           Y R +Y +I+ + ++V  S  FC+L  I I S     L ALLF  F+
Sbjct: 72  YERKKYEFINKNIIFVFKSLLFCIL--IFILSSHISSLFALLFWLFY 116


>UniRef50_Q7QPV4 Cluster: GLP_433_7606_11109; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_433_7606_11109 - Giardia lamblia ATCC
            50803
          Length = 1167

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 86   LNSNSKKAGKQQSY*FEKYVTLNNYIFKHTKTMTAQHVYSMYMYVGIP 229
            +NS++     Q SY  ++YV LN+   K+     A++V     Y+G+P
Sbjct: 1056 VNSSTTCYAMQVSYITDEYVILNSLTIKYDTCTAAEYVEPSLFYIGVP 1103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,051,777
Number of Sequences: 1657284
Number of extensions: 9865353
Number of successful extensions: 22395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22382
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)