Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0380
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058541-1|AAL13770.1|  664|Drosophila melanogaster LD24308p pro...    29   7.1  
AY052143-1|AAK93567.1|  942|Drosophila melanogaster SD10311p pro...    29   7.1  
AF318272-1|AAK13420.1|  840|Drosophila melanogaster metabotropic...    29   7.1  
AE014298-1094|AAS65275.1|  646|Drosophila melanogaster CG2206-PB...    29   7.1  
AE014298-1093|AAF46301.1|  664|Drosophila melanogaster CG2206-PA...    29   7.1  
AE014297-804|AAF54281.3|  942|Drosophila melanogaster CG8202-PA ...    29   7.1  
AE014134-2550|AAF53431.2|  836|Drosophila melanogaster CG15274-P...    29   7.1  

>AY058541-1|AAL13770.1|  664|Drosophila melanogaster LD24308p
           protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 265 GKCTAISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKL 128
           GKCT  +    + + Y+  H     CS+CFC+     ++SD FF L
Sbjct: 387 GKCTRGTTKVDSWWRYLLWH-----CSYCFCLCDEEGLKSDRFFNL 427


>AY052143-1|AAK93567.1|  942|Drosophila melanogaster SD10311p
           protein.
          Length = 942

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 250 ISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKLIALLFTCFFTI-TVQAIVF 74
           +S Y   R T+ ++  VYV   H  C L          F + A +  CF TI +++A+  
Sbjct: 636 LSFYVEARGTFSNLDAVYVTLVHAACKLATRNRSKSTGF-VKACIAYCFITIPSIEAVQQ 694

Query: 73  QLN 65
           Q+N
Sbjct: 695 QMN 697


>AF318272-1|AAK13420.1|  840|Drosophila melanogaster metabotropic
           GABA-B receptor subtype1 protein.
          Length = 840

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 271 YFGKCTAISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKLIAL--LFTCFFT 98
           Y  +   +   N +RY  + I+ V VLC     +   I  Q D  F  +AL  +F CF +
Sbjct: 665 YETRSIKVKQINDSRYVGMSIYNVVVLCLITAPVGMVIASQQDASFAFVALAVIFCCFLS 724

Query: 97  I 95
           +
Sbjct: 725 M 725


>AE014298-1094|AAS65275.1|  646|Drosophila melanogaster CG2206-PB,
           isoform B protein.
          Length = 646

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 265 GKCTAISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKL 128
           GKCT  +    + + Y+  H     CS+CFC+     ++SD FF L
Sbjct: 369 GKCTRGTTKVDSWWRYLLWH-----CSYCFCLCDEEGLKSDRFFNL 409


>AE014298-1093|AAF46301.1|  664|Drosophila melanogaster CG2206-PA,
           isoform A protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 265 GKCTAISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKL 128
           GKCT  +    + + Y+  H     CS+CFC+     ++SD FF L
Sbjct: 387 GKCTRGTTKVDSWWRYLLWH-----CSYCFCLCDEEGLKSDRFFNL 427


>AE014297-804|AAF54281.3|  942|Drosophila melanogaster CG8202-PA
           protein.
          Length = 942

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 250 ISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKLIALLFTCFFTI-TVQAIVF 74
           +S Y   R T+ ++  VYV   H  C L          F + A +  CF TI +++A+  
Sbjct: 636 LSFYVEARGTFSNLDAVYVTLVHAACKLATRNRSKSTGF-VKACIAYCFITIPSIEAVQQ 694

Query: 73  QLN 65
           Q+N
Sbjct: 695 QMN 697


>AE014134-2550|AAF53431.2|  836|Drosophila melanogaster CG15274-PA
           protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 271 YFGKCTAISMYNRNRYTYIHIHTVYVLCSHCFCMLKNIIIQSDVFFKLIAL--LFTCFFT 98
           Y  +   +   N +RY  + I+ V VLC     +   I  Q D  F  +AL  +F CF +
Sbjct: 661 YETRSIKVKQINDSRYVGMSIYNVVVLCLITAPVGMVIASQQDASFAFVALAVIFCCFLS 720

Query: 97  I 95
           +
Sbjct: 721 M 721


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,043,363
Number of Sequences: 53049
Number of extensions: 450633
Number of successful extensions: 861
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)