Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0379
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 372 YYYLFIFFFLDPTPSVICHFQKGYY 446
           Y+++  FF+   T ++I  + K +Y
Sbjct: 240 YFFISTFFYFFTTGNIIATYDKQFY 264


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 372 YYYLFIFFFLDPTPSVICHFQKGYY 446
           Y+++  FF+   T ++I  + K +Y
Sbjct: 236 YFFISTFFYFFTTGNIIATYDKQFY 260


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 NHFHIVYFTSNLH 468
           +HF IV+FT  LH
Sbjct: 165 SHFLIVFFTETLH 177


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 NHFHIVYFTSNLH 468
           +HF IV+FT  LH
Sbjct: 165 SHFLIVFFTETLH 177


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 NHFHIVYFTSNLH 468
           +HF IV+FT  LH
Sbjct: 165 SHFLIVFFTETLH 177


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 506 NHFHIVYFTSNLH 468
           +HF IV+FT  LH
Sbjct: 165 SHFLIVFFTETLH 177


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 165 IYLSFTKI*CNTDRGCYKLED*CRALA 245
           IY+  TKI   TD    K    CR L+
Sbjct: 661 IYIQVTKIIIRTDHQALKFLSRCRLLS 687


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 216 YNILCPCYIRFL*RINKFSL 157
           Y +L P Y+R L R +KF L
Sbjct: 153 YAVLKPLYLRALDRRDKFML 172


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 216 YNILCPCYIRFL*RINKFSL 157
           Y +L P Y+R L R +KF L
Sbjct: 153 YAVLKPLYLRALDRRDKFML 172


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 531 NILISLCYKSFSYCLLYIKSSFAI 460
           ++ + +C+ S+ Y   +I   FAI
Sbjct: 57  SVTLHVCFNSYMYAFTHIFFFFAI 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,181
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)