Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0378
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   109   5e-24
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     109   5e-24
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   109   5e-24
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   109   5e-24
BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p pro...    29   8.8  
AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein...    29   8.8  
AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB...    29   8.8  
AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA...    29   8.8  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  109 bits (261), Expect = 5e-24
 Identities = 52/59 (88%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +2

Query: 92  MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFNLMG 265
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF   G
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDG 59



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 253 QFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 351
           +FDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 56  RFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  109 bits (261), Expect = 5e-24
 Identities = 52/59 (88%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +2

Query: 92  MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFNLMG 265
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF   G
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDG 59



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 253 QFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 351
           +FDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 56  RFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  109 bits (261), Expect = 5e-24
 Identities = 52/59 (88%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +2

Query: 92  MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFNLMG 265
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF   G
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDG 59



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 253 QFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 351
           +FDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 56  RFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  109 bits (261), Expect = 5e-24
 Identities = 52/59 (88%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +2

Query: 92  MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFNLMG 265
           M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF   G
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDG 59



 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = +1

Query: 253 QFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 351
           +FDGQPINENDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 56  RFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88


>BT003801-1|AAO41484.1|  504|Drosophila melanogaster AT23571p
           protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 HSNIT*DGRGRHNRGLPTADRRSVPSV 365
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


>AJ294538-1|CAC82378.1|  660|Drosophila melanogaster Lasp protein
           protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 HSNIT*DGRGRHNRGLPTADRRSVPSV 365
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419


>AE014296-2785|AAN11739.2|  657|Drosophila melanogaster CG3849-PB,
           isoform B protein.
          Length = 657

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 HSNIT*DGRGRHNRGLPTADRRSVPSV 365
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416


>AE014296-2784|AAF49426.3|  504|Drosophila melanogaster CG3849-PA,
           isoform A protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 HSNIT*DGRGRHNRGLPTADRRSVPSV 365
           HSNI  +G G  N+ LP   RRS  SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,088,590
Number of Sequences: 53049
Number of extensions: 615251
Number of successful extensions: 1112
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)