Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0377
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 35 0.083
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.14
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.25
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.44
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.44
SB_27533| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.58
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.58
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 32 0.58
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 0.77
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.77
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.77
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 31 1.0
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.0
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 31 1.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.3
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 2.3
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 29 4.1
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.1
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.4
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 29 5.4
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 5.4
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 28 9.5
SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8) 28 9.5
SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31) 28 9.5
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 28 9.5
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 28 9.5
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
GG A GA P IAL + ICG SL+++T VTAAHC R++ Q+ + G
Sbjct: 479 GGKDAIPGAWPWQ----IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVG 533
Query: 190 TAN 198
N
Sbjct: 534 EHN 536
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
GG A + P +++ N T CG SL+ +T++HC+ T N + QF + G
Sbjct: 248 GGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 307
Query: 190 TANI 201
++
Sbjct: 308 EHDV 311
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 34.7 bits (76), Expect = 0.083
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL-AF 186
GG GA P + T G ICG S++ + VTAAHC T+ A ++T+ AF
Sbjct: 1785 GGKVTEHGAWPWQVQIGYK-TMGH--ICGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAF 1841
Query: 187 GTANIFSG 210
N+ G
Sbjct: 1842 SDLNVTLG 1849
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 599 LIGITSFGSDRGCQRGYPAGFARVTSFNSWIRARI 703
L+G+TS+ + GY +A V F WIR +
Sbjct: 1988 LMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTV 2022
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 180
GGS A GA P V+ + N CG +L+T +TAAHC +N + Q L
Sbjct: 633 GGSTAPPGAWPWQ---VMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVRL 686
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 34 AHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
A PH ++ + ICGASLLT ++TAAHC T + A +TL G
Sbjct: 247 AVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTLVAG 297
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
GG A P AGL L + T +CG SL+ VTAAHC
Sbjct: 435 GGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGL--VIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLA 183
GG+ A GA P + V ICG S++ VTAAHC+ + A+ +T+A
Sbjct: 106 GGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCF-AYSKDAKDYTIA 164
Query: 184 FG 189
G
Sbjct: 165 VG 166
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 144
GG A AGA P LA + + + CG +L+ VTAAHC+
Sbjct: 726 GGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCF 766
>SB_27533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 135 SLLENQERPGSSVHPRFWYSXXXXXXXXXXXXXCPPARQLNMNNLNN 275
+LL+ RPGS HP F++ CP RQ +++ +NN
Sbjct: 199 ALLKLPRRPGSCKHPIFFHFEGSVSRDWPIHNPCPNCRQSHLSGVNN 245
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 61 IALTNGRTSICGASLLTNTRSVTAAHC 141
IAL + ICG SL++ T VTAAHC
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHC 109
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 64 ALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGT 216
A NG ICG SLL++T +TAAHC R+ +T+ G GT
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGT 380
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/61 (24%), Positives = 23/61 (37%)
Frame = +2
Query: 509 TLCVSGANGRSTCXXXXXXXXXXXXXXXRQLIGITSFGSDRGCQRGYPAGFARVTSFNSW 688
T+ +G +G S C L G S+G+ C +AR++S W
Sbjct: 482 TMICAGGSGSSACSGDSGGPLVCHEGGTWVLRGAVSWGTSHSCPGRMFVAYARISSHIDW 541
Query: 689 I 691
I
Sbjct: 542 I 542
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 91 CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
CGASLL+ ++TAAHC + R++ +TLA G
Sbjct: 111 CGASLLSPGWALTAAHCVQ-RSSNPADYTLAAG 142
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 73 NGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGGTRV 222
NGR ICG SL+ VTAAHC RN +T+ G A+ +G T V
Sbjct: 52 NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVG-AHHRTGNTPV 98
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
GG+AAN G P A L T G CG SL+ + +TAAHC
Sbjct: 393 GGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHC 433
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 144
GG A GA P L L NG T CG SL+ VTA HC+
Sbjct: 56 GGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCF 96
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.5 bits (68), Expect = 0.77
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQ-ARQFTLAF 186
GG A AG P IAL R CG +L+ VT AHC+ ++ R + +
Sbjct: 31 GGDEAKAGQFPWQ----IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWNVTL 86
Query: 187 GTANI 201
G N+
Sbjct: 87 GEYNL 91
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNG-RTSICGASLLTNTRSVTAAHCWRTRN 156
GG+ A G P G+ +G + ICG +L+ +TAAHC+ N
Sbjct: 129 GGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFYKTN 178
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 55 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
+++ N T CG SL+ +T++HC+ T N + QF + G
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTR 153
GG A+ + P LV+ NG CG SL+ VT+ HC+ R
Sbjct: 252 GGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 144
GG + GA P A L + NG CG S++ + VTAAHC+
Sbjct: 29 GGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFG 189
GG+ A G P L + +CG +LLT+ +TAA C+R N +A ++ + G
Sbjct: 260 GGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRD-NKRAGEWKVILG 315
Query: 190 TANIF 204
+ +
Sbjct: 316 ETDFY 320
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 34 AHPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFS 207
A PH I+L GR+ CG SL+++ VTAAHC RN +T+ G A+
Sbjct: 112 AQPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPGGYTVVVG-AHKKR 168
Query: 208 GGTRV 222
G T V
Sbjct: 169 GSTSV 173
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 34 AHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 141
A PH I+L GR +CG +L+++ VTA+HC
Sbjct: 852 AQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 599 LIGITSFGSDRGCQRGYPAGFARVTSFNSWIRARI 703
L G S+G+ R C Y F RV+S+ +WI +I
Sbjct: 692 LHGAVSYGA-RWCPTDYYTVFTRVSSYVAWINGKI 725
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
GG+ A G P A L+ G CG +L+ VTA+HC
Sbjct: 213 GGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHC 256
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 261 NNLNNDVAIINHNHVG-FNNNIQRINL 338
NN+NN+ IIN+N++ NNNI IN+
Sbjct: 409 NNINNNNIIINNNNIIIINNNIININI 435
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 267 LNNDVAIINHNHVGFNNNIQRINL 338
+NN+ IIN+N++ NNNI N+
Sbjct: 393 INNNNIIINNNNIIINNNINNNNI 416
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 28 AGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
A A H I+L ICG SL+T +TAAHC
Sbjct: 42 ANAPQHAWPWQISLRTNGQHICGGSLITPEWVLTAAHC 79
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 34 AHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGTANIFSGG 213
A PH +++ + ICG SLL+ +TAAHC R+ + +T+ G G
Sbjct: 37 AVPHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSADYTVIVGAHKRVLDG 95
Query: 214 T 216
T
Sbjct: 96 T 96
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 73 NGRTSICGASLLTNTRSVTAAHC 141
NGR ICG SL+T +TAAHC
Sbjct: 101 NGR-HICGGSLITPEWVLTAAHC 122
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQAR 168
GG + HP + +++ CG SL+ VTAAHC+ + + R
Sbjct: 43 GGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 34 AHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
A P+ ++++ G+ CG +L+++ +TAAHC
Sbjct: 483 ARPYSWPWQVSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 255 NMNNLNNDVAIINHNHVGFNNNIQRIN 335
N NN NN++ IN+N+ NNNI N
Sbjct: 98 NNNNNNNNINNINNNNNNNNNNINNNN 124
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRN 156
GG GA+P + + G CG SL++ +TAAHC RN
Sbjct: 110 GGHDTVKGAYPWH----VLIRKGGHVACGGSLISEKWVLTAAHCVTHRN 154
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
GG+ A P A ++I + CG +L+ VTAAHC
Sbjct: 287 GGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC 330
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
GG+ A GA P A ++ NG CG +L+ VTA+HC
Sbjct: 251 GGTTAQRGAWPWQA--MLRYYNGN-HFCGGTLVHPRWVVTASHC 291
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 305 WLQQQHPAHQPSQWKQQLCWYLGLGCRLR 391
W+ + HP H+ ++LC+ +G C R
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCAR 485
>SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8)
Length = 213
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 255 NMNNLNNDVAIINHNHVGFNNN 320
N NN+NN++ I N+N+ NNN
Sbjct: 128 NNNNINNNIIINNNNNNDENNN 149
>SB_45863| Best HMM Match : Peptidase_M10 (HMM E-Value=9e-31)
Length = 273
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 255 NMNNLNNDVAIINHNHVGFNNN 320
N NN+NN+ I N+N++ NNN
Sbjct: 238 NNNNINNNNNINNNNNINNNNN 259
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQA 165
GG+AA G P A L T CG SL+ +TA HC + A +
Sbjct: 13 GGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHCVERKQASS 61
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 13 GSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 141
G A + + P +A L +N T CGA+L+ ++TAAHC
Sbjct: 329 GQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHC 369
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 10 GGSAANAGAHPHLAGLVIAL--TNGRTSICGASLLTNTRSVTAAHC 141
GGS + G +P L +N T CG +L+ +TAAHC
Sbjct: 1163 GGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,217,742
Number of Sequences: 59808
Number of extensions: 315684
Number of successful extensions: 2041
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1979
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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