Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0375
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.30 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 14  YLPWYI*VVYYQRWQSVHLDKKFLL 88
           Y PW   V  ++ WQ +HL+KK +L
Sbjct: 525 YRPWQT-VYNHRPWQQLHLNKKQIL 548



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 45  IKGGNLCIWTKNF 83
           I GG  C+W++ F
Sbjct: 547 ILGGEACLWSEQF 559


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 442 PEKTDSIEFFDYDEERIIPWT 504
           PEK D   F D ++ +I+P T
Sbjct: 393 PEKFDPERFSDENKAKIVPGT 413


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 50  FDNRRLKYTKVNK 12
           F NRR+K+ K NK
Sbjct: 290 FQNRRMKWKKENK 302


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 50  FDNRRLKYTKVNK 12
           F NRR+K+ K NK
Sbjct: 292 FQNRRMKWKKENK 304


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 50  FDNRRLKYTKVNK 12
           F NRR+K+ K NK
Sbjct: 281 FQNRRMKWKKDNK 293


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 176 VNY*PLFNAGFEPYSL 129
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 442 PEKTDSIEFFDYDEERIIPWT 504
           PEK D   F D +++ + P+T
Sbjct: 406 PEKYDPERFSDENKKNLTPYT 426


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 524 RVFSVGRDSDPVVDSAKHCSC 586
           R    GR   P V++ KH SC
Sbjct: 337 RARRTGRKVSPRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 524 RVFSVGRDSDPVVDSAKHCSC 586
           R    GR   P V++ KH SC
Sbjct: 337 RARRTGRKVSPRVNTIKHTSC 357


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 50  FDNRRLKYTKVNK 12
           F NRR+K+ K NK
Sbjct: 281 FQNRRMKWKKDNK 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,237
Number of Sequences: 336
Number of extensions: 3578
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)