Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0374
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 172 2e-45
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 172 2e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 164 6e-43
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 134 8e-34
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 118 7e-29
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.0
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 6.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 6.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 8.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.8
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 172 bits (419), Expect = 2e-45
Identities = 76/88 (86%), Positives = 81/88 (92%)
Frame = +2
Query: 2 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 181
IGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP R
Sbjct: 124 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTR 183
Query: 182 PTDKPLRLPLQDVYKIGGIGTMPVAELK 265
PTDK LRLPLQDVYKIGGIGT+PV ++
Sbjct: 184 PTDKALRLPLQDVYKIGGIGTVPVGRVE 211
Score = 127 bits (306), Expect = 1e-31
Identities = 59/66 (89%), Positives = 61/66 (92%)
Frame = +1
Query: 256 RVETGVLKPGTIVVFAPANITTEVKSVNMHHETLQEAVPGDNVGFNVKNVSVKELRRGYV 435
RVETGVLKPG +V FAPA +TTEVKSV MHHE LQEAVPGDNVGFNVKNVSVKELRRGYV
Sbjct: 209 RVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 268
Query: 436 AGDSKN 453
AGDSKN
Sbjct: 269 AGDSKN 274
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 172 bits (419), Expect = 2e-45
Identities = 76/88 (86%), Positives = 81/88 (92%)
Frame = +2
Query: 2 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 181
IGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP R
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTR 240
Query: 182 PTDKPLRLPLQDVYKIGGIGTMPVAELK 265
PTDK LRLPLQDVYKIGGIGT+PV ++
Sbjct: 241 PTDKALRLPLQDVYKIGGIGTVPVGRVE 268
Score = 165 bits (401), Expect = 4e-43
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +1
Query: 256 RVETGVLKPGTIVVFAPANITTEVKSVNMHHETLQEAVPGDNVGFNVKNVSVKELRRGYV 435
RVETGVLKPG +V FAPA +TTEVKSV MHHE LQEAVPGDNVGFNVKNVSVKELRRGYV
Sbjct: 266 RVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 325
Query: 436 AGDSKNNPPKGAADFTAQVIVLNH 507
AGDSKNNPPKGAADFTAQVIVLNH
Sbjct: 326 AGDSKNNPPKGAADFTAQVIVLNH 349
Score = 134 bits (324), Expect = 8e-34
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +3
Query: 510 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPL 689
GQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+
Sbjct: 351 GQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPM 410
Query: 690 CVESFQEFP 716
C E+FQEFP
Sbjct: 411 CAEAFQEFP 419
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 164 bits (399), Expect = 6e-43
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = +2
Query: 2 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 181
IGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALDAILPP+R
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSR 240
Query: 182 PTDKPLRLPLQDVYKIGGIGTMPVAELK 265
PTDK LRLPLQDVYKIGGIGT+PV ++
Sbjct: 241 PTDKALRLPLQDVYKIGGIGTVPVGRVE 268
Score = 156 bits (378), Expect = 2e-40
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 RVETGVLKPGTIVVFAPANITTEVKSVNMHHETLQEAVPGDNVGFNVKNVSVKELRRGYV 435
RVETG+LKPG +V FAPA +TTEVKSV MHHE L EA+PGDNVGFNVKN+SVKELRRGYV
Sbjct: 266 RVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYV 325
Query: 436 AGDSKNNPPKGAADFTAQVIVLNH 507
AGDSKN PP+GAADFTAQVIVLNH
Sbjct: 326 AGDSKNQPPRGAADFTAQVIVLNH 349
Score = 136 bits (330), Expect = 1e-34
Identities = 65/90 (72%), Positives = 71/90 (78%)
Frame = +3
Query: 447 QKQPT*GCCRFYSSSHCA*PSGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 626
+ QP G F + GQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 330 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 389
Query: 627 NPKSIKSGDAAIVNLVPSKPLCVESFQEFP 716
NPKSIKSGDAAIV L P+KP+CVE+FQEFP
Sbjct: 390 NPKSIKSGDAAIVMLQPTKPMCVEAFQEFP 419
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 134 bits (324), Expect = 8e-34
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +2
Query: 2 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 181
IGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP R
Sbjct: 108 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTR 167
Query: 182 PTDK 193
PTDK
Sbjct: 168 PTDK 171
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 118 bits (283), Expect = 7e-29
Identities = 53/60 (88%), Positives = 56/60 (93%)
Frame = +1
Query: 328 KSVNMHHETLQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 507
KSV MHHE L EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Score = 113 bits (273), Expect = 1e-27
Identities = 56/79 (70%), Positives = 60/79 (75%)
Frame = +3
Query: 447 QKQPT*GCCRFYSSSHCA*PSGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 626
+ QP G F + GQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 41 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 100
Query: 627 NPKSIKSGDAAIVNLVPSK 683
NPKSIKSGDAAIV L P+K
Sbjct: 101 NPKSIKSGDAAIVMLQPTK 119
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 406 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 504
S ++LR ++A + + PKG Q++VLN
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLN 315
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 524 RLHTSLGLPHCPHC 565
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 291 NGTWFQHTSFNSATGMVPIPP 229
N T+ Q+ FN+ T VP+ P
Sbjct: 214 NMTFAQNGPFNTTTIFVPVKP 234
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 220 IQNRWYWYHARRRVETGVLKPGTIV 294
++NR A R+ G +KPG+I+
Sbjct: 370 LRNRARKARANRKPNLGDIKPGSII 394
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 82 FG*RLQHVVSVPSRNGHESDSSWV 11
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,270
Number of Sequences: 438
Number of extensions: 5288
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -