Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0373
(538 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 146 3e-34
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 124 1e-27
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 123 3e-27
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 109 5e-23
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 109 5e-23
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 100 2e-20
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 97 2e-19
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 96 5e-19
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 94 2e-18
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 92 8e-18
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 92 8e-18
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 89 6e-17
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 83 4e-15
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 79 6e-14
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 77 3e-13
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 73 3e-12
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 71 2e-11
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 71 2e-11
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 69 7e-11
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 66 4e-10
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 63 3e-09
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 62 6e-09
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 62 8e-09
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 61 2e-08
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 60 2e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 59 6e-08
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 59 6e-08
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 58 2e-07
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 57 2e-07
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 56 7e-07
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 55 9e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 53 4e-06
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 49 8e-05
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 4e-04
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 41 0.016
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 41 0.021
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 41 0.021
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 41 0.021
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 40 0.027
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 40 0.048
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 38 0.19
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 37 0.26
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 37 0.34
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 35 1.0
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 34 1.8
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 34 1.8
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 34 1.8
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 34 2.4
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 3.1
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 33 4.2
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 4.2
UniRef50_A5N1Q3 Cluster: Predicted permease; n=1; Clostridium kl... 33 5.5
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 5.5
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 33 5.5
UniRef50_A5EXI7 Cluster: Conserved hypothetical membrane protein... 32 7.3
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 32 7.3
UniRef50_UPI00015B4355 Cluster: PREDICTED: similar to oxidative ... 32 9.6
UniRef50_Q6AAS7 Cluster: Conserved protein; n=2; Actinomycetales... 32 9.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 146 bits (354), Expect = 3e-34
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELAAVRTVCSH+ENMIKGV
Sbjct: 23 RVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGV 82
Query: 183 TKGFQYKMRAVYAHFPINCVTTE 251
T GFQYKMRAVYAHFPINCVT+E
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSE 105
Score = 142 bits (344), Expect = 5e-33
Identities = 69/79 (87%), Positives = 74/79 (93%)
Frame = +2
Query: 257 SIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKN 436
++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKN
Sbjct: 108 TVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKN 167
Query: 437 KDIRKFLDGLYVSEKTTVV 493
KDIRKFLDGLYVSEKTTVV
Sbjct: 168 KDIRKFLDGLYVSEKTTVV 186
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 124 bits (300), Expect = 1e-27
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R+V V GPRG LKR+F+HL +++ V L+V KWFG +KE+AA+RTVCSH++NMIKGV
Sbjct: 23 RVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGV 82
Query: 183 TKGFQYKMRAVYAHFPINCVTTEG 254
TKGF+YKMR+VYAHFPIN +G
Sbjct: 83 TKGFRYKMRSVYAHFPINVTLQDG 106
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 123 bits (296), Expect = 3e-27
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = +2
Query: 257 SIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKN 436
S++EIRNFLGEKYIRRV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTVKN
Sbjct: 110 SLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKN 169
Query: 437 KDIRKFLDGLYVSEKTTV 490
KDIRKFLDG+YVSEK TV
Sbjct: 170 KDIRKFLDGIYVSEKGTV 187
Score = 118 bits (284), Expect = 9e-26
Identities = 53/90 (58%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIK 176
R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+G++KELA VRT+CSHV+NMIK
Sbjct: 23 RTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIK 82
Query: 177 GVTKGFQYKMRAVYAHFPINCVTTEGIQLL 266
GVT GF+YKMR+VYAHFPIN V E L+
Sbjct: 83 GVTLGFRYKMRSVYAHFPINVVIQENGSLV 112
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 109 bits (261), Expect = 5e-23
Identities = 46/84 (54%), Positives = 63/84 (75%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +ENMI GV
Sbjct: 41 RSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGV 100
Query: 183 TKGFQYKMRAVYAHFPINCVTTEG 254
TKG++YKMR VYAHFPIN T+G
Sbjct: 101 TKGYEYKMRFVYAHFPINVAVTDG 124
Score = 93.1 bits (221), Expect = 4e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +2
Query: 251 GYSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 430
G ++EIRNF GEK +RR+++ G+T + K KDE+++ GNSLE +S S A IQ + +
Sbjct: 124 GGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAI 183
Query: 431 KNKDIRKFLDGLYVSEKTTV 490
K KD+RKFLDG+YVSE+ +
Sbjct: 184 KYKDVRKFLDGIYVSERNVL 203
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 109 bits (261), Expect = 5e-23
Identities = 48/83 (57%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKG 179
++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG+++ +AA+RT SHV+N+I G
Sbjct: 23 KVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITG 82
Query: 180 VTKGFQYKMRAVYAHFPINCVTT 248
VTKG++YKMR VYAHFPIN T
Sbjct: 83 VTKGYRYKMRFVYAHFPINASIT 105
Score = 106 bits (255), Expect = 3e-22
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
IEIRNFLGEK +R+V M GVT++ S K KDEL+++GN +E VS SAALI Q VKNKD
Sbjct: 111 IEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKD 170
Query: 443 IRKFLDGLYVSEKTTVVLD 499
IRKFLDG+YVS+K T+ D
Sbjct: 171 IRKFLDGIYVSDKGTITED 189
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 100 bits (240), Expect = 2e-20
Identities = 48/78 (61%), Positives = 61/78 (78%)
Frame = +2
Query: 257 SIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKN 436
+++EIRNFLGE+ R +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V+N
Sbjct: 108 TVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRN 167
Query: 437 KDIRKFLDGLYVSEKTTV 490
KDIRKFLDG+YVSE+ +
Sbjct: 168 KDIRKFLDGIYVSERGNI 185
Score = 89.8 bits (213), Expect = 3e-17
Identities = 43/83 (51%), Positives = 57/83 (68%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R VTV GPRG LK+N +H+ ++++ +K W GS+K A +R+V S + NMI GV
Sbjct: 24 RNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVYSIINNMIIGV 82
Query: 183 TKGFQYKMRAVYAHFPINCVTTE 251
T+GF+YKMR VYAHFPIN TE
Sbjct: 83 TQGFRYKMRLVYAHFPININLTE 105
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 97.5 bits (232), Expect = 2e-19
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSHVENMIKG 179
R + V G G L+R F+H+ VD+++V R + VE WFG K A +RTVCSH+ENMI G
Sbjct: 85 RHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIENMITG 144
Query: 180 VTKGFQYKMRAVYAHFPINC-VTTEG 254
V + +QYK+R VYAHFPIN +T +G
Sbjct: 145 VRQRYQYKLRFVYAHFPINSNITNDG 170
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 95.9 bits (228), Expect = 5e-19
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R+V V GPRG L +N KH+ V VN +L+KV G +K +AA+RTV S V+NMI GV
Sbjct: 23 RIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGV 82
Query: 183 TKGFQYKMRAVYAHFPIN 236
TKG++YKMR VYAHFPIN
Sbjct: 83 TKGYKYKMRYVYAHFPIN 100
Score = 95.9 bits (228), Expect = 5e-19
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +2
Query: 251 GYSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 430
G IE+RNFLG+K IR V + GVT+ S KDE+++ GNS+EDVS +AA +QQ V
Sbjct: 108 GAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRV 167
Query: 431 KNKDIRKFLDGLYVSEKTTVVLD 499
+NKDIRKFLDG+YVS K + D
Sbjct: 168 RNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +2
Query: 266 EIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDI 445
EIRNFLGEK +R + M GVT+ QKD++++EGN ++ VS SAAL+ +T V+NKDI
Sbjct: 173 EIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDIDLVSQSAALLHGATLVRNKDI 232
Query: 446 RKFLDGLYVSEKTTVV 493
RKFLDG+Y + K TVV
Sbjct: 233 RKFLDGIYCTGKDTVV 248
Score = 72.9 bits (171), Expect = 4e-12
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 33 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 203
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 204 MRAVYAHFPINCV 242
MRAVYAHFPIN +
Sbjct: 152 MRAVYAHFPINII 164
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 91.9 bits (218), Expect = 8e-18
Identities = 43/77 (55%), Positives = 51/77 (66%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
R+VTVKG +G L R+F H +DI N + V WF K A RT+CSH+ENM KGV
Sbjct: 22 RVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMFKGV 80
Query: 183 TKGFQYKMRAVYAHFPI 233
T GF+YKMR YAHFPI
Sbjct: 81 TYGFEYKMRLAYAHFPI 97
Score = 84.6 bits (200), Expect = 1e-15
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
IEIRNF+ + RR++ PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD
Sbjct: 108 IEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKD 167
Query: 443 IRKFLDGLYVSEK 481
+RKFLDG YVS +
Sbjct: 168 LRKFLDGCYVSSR 180
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 91.9 bits (218), Expect = 8e-18
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 439
+EI+NFLGEK IR +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ VKNK
Sbjct: 119 VEIKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNK 178
Query: 440 DIRKFLDGLYVSEK 481
DIR+FLDG+YVSEK
Sbjct: 179 DIRQFLDGIYVSEK 192
Score = 72.5 bits (170), Expect = 6e-12
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 9/86 (10%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------LLKVEKWFGSKKELAAVRTVCS 155
++V VKGPRG L +NF+H A+DI++ VN + + V W +K+ V +V S
Sbjct: 23 KVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSVAS 82
Query: 156 HVENMIKGVTKGFQYKMRAVYAHFPI 233
+ NMI+GVT G+++KM YAHFPI
Sbjct: 83 QIRNMIRGVTTGYKFKMVLAYAHFPI 108
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 89.0 bits (211), Expect = 6e-17
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 9/90 (10%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKWFGSKKELAAVRTVCSHV 161
+ V GPRG L R F+H VDI + P+ ++ ++ W+G++++ A VRT+ SH+
Sbjct: 26 IKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDSAVVRTIASHI 85
Query: 162 ENMIKGVTKGFQYKMRAVYAHFPINCVTTE 251
+NMI GVTKG+QYKMR VYAHFP+ V +
Sbjct: 86 KNMITGVTKGYQYKMRVVYAHFPVTLVIAD 115
Score = 80.6 bits (190), Expect = 2e-14
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
I+++NFLGEK R ++M GV V KDE+ +EGN +E VS SAA I + V+NKD
Sbjct: 120 IQVQNFLGEKRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKD 177
Query: 443 IRKFLDGLYVSEKTTVVLD 499
IR+FLDG+YVSEK + D
Sbjct: 178 IRQFLDGVYVSEKCLIEND 196
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 83.0 bits (196), Expect = 4e-15
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = +2
Query: 257 SIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKN 436
S +EIRNFLGEK IR++ M GV + + +KDE+ + G+ L VS +AA IQQS KN
Sbjct: 109 SCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKN 168
Query: 437 KDIRKFLDGLYVSEK 481
KD+RKFLDG+Y+ K
Sbjct: 169 KDLRKFLDGIYIIMK 183
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 179
R ++ G G + R+F+ + IR + + + W KK+LA + T+ SH+ NMI G
Sbjct: 23 RKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHITNMIVG 82
Query: 180 VTKGFQYKMRAVYAHFPINCVTTE 251
V+ GF+Y ++ +YAHFPIN T+
Sbjct: 83 VSLGFEYILQPIYAHFPINLSITD 106
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 79.0 bits (186), Expect = 6e-14
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 266 EIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDI 445
++R+ + V+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DI
Sbjct: 56 KVRSVYAHFPLNVVQMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDI 115
Query: 446 RKFLDGLYVSEKTTV 490
RKF+DG+YVSEK T+
Sbjct: 116 RKFVDGIYVSEKGTM 130
Score = 72.5 bits (170), Expect = 6e-12
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +3
Query: 123 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCV 242
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV 69
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 76.6 bits (180), Expect = 3e-13
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
V VKGP+G L+R K+ V I + +++ + K F KK++A VRT +H+ NMIKGVT+
Sbjct: 26 VKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFKAHINNMIKGVTE 84
Query: 189 GFQYKMRAVYAHFPINCVTTEGIQLL 266
GF+Y+++ VY+HFP+ V +G +++
Sbjct: 85 GFKYRLKVVYSHFPMT-VKVQGDEVV 109
Score = 59.3 bits (137), Expect = 6e-08
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+ I NFLGEK RR K+ PGVTV + E+ +EG E V +AA I+Q+T + D
Sbjct: 108 VVIENFLGEKNPRRAKILPGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWD 164
Query: 443 IRKFLDGLYVSEK 481
R F DG+Y+ EK
Sbjct: 165 RRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/86 (41%), Positives = 57/86 (66%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
V VKGP+G L+R F + I + ++ + K F +K++A RT +H+ NMIKGVT+
Sbjct: 26 VKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFAAHIRNMIKGVTE 84
Query: 189 GFQYKMRAVYAHFPINCVTTEGIQLL 266
GF YK++ VY+HFPI+ V +G +++
Sbjct: 85 GFTYKLKVVYSHFPIS-VKVQGDEVI 109
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +2
Query: 269 IRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 448
I NFLGEK R+ K+ PGVTV + E+I+EG E V +AA I+Q+T + D R
Sbjct: 110 IENFLGEKAPRKAKILPGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRR 166
Query: 449 KFLDGLYVSEK 481
F DG+Y+ EK
Sbjct: 167 IFQDGIYIVEK 177
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKELAAVRTVCSHVENMIK 176
R V VKGP+G L R+F H+ V++ ++ +L K V+KW+G++KELA V T+CS V+N IK
Sbjct: 23 RTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQNTIK 82
Query: 177 GVTKG 191
VT G
Sbjct: 83 WVTLG 87
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +2
Query: 260 IIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 439
I+ ++NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I KN+
Sbjct: 128 ILLVKNFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNR 186
Query: 440 DIRKFLDGLYVSEK 481
D R FLDG++V+E+
Sbjct: 187 DSRVFLDGIFVTER 200
Score = 56.8 bits (131), Expect = 3e-07
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +3
Query: 3 RLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIK 176
++ T +GP+G +++ +H L DI N +++ W G +K +A TV S + N IK
Sbjct: 43 KIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNGKRKAMALAITVESLLRNAIK 99
Query: 177 GVTKGFQYKMRAVYAHFPINCVTTEGIQLL 266
VT GF Y M+AVY HF IN E ++L
Sbjct: 100 AVTVGFAYTMKAVYNHFSINMEIKEDGKIL 129
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 68.9 bits (161), Expect = 7e-11
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
V V+GP G ++++F H + IR V + VE + +KK+ A V T+ S + NMI GVT
Sbjct: 25 VEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYALVGTIASIINNMIIGVT 83
Query: 186 KGFQYKMRAVYAHFPIN 236
KG++YK++ VYAHFP++
Sbjct: 84 KGYRYKLKIVYAHFPMS 100
Score = 38.3 bits (85), Expect = 0.11
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 439
I I NFLGE+ R + PG V +KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 108 IIIENFLGERGKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +2
Query: 257 SIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKN 436
++I + NF GE+ R+ K+ G VV+ + +++I+ G+ L DVS +AA ++Q T VKN
Sbjct: 90 AMILVENFQGERSARKAKIVGGTKVVS---KGEDVIVTGHVLTDVSQTAANLEQGTKVKN 146
Query: 437 KDIRKFLDGLYVSEK 481
KD R FLDG+YV EK
Sbjct: 147 KDHRVFLDGVYVYEK 161
Score = 53.2 bits (122), Expect = 4e-06
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 179
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 180 VTKGFQYKMRAVYAHFPINCVTTEGIQLL 266
V G+ K++ VYAHFPI + +G +L
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDGAMIL 93
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/87 (33%), Positives = 53/87 (60%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
++ V GP+G ++R F H + + VN + +E +F +++E + T SH++NM++GV
Sbjct: 24 ILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQ 82
Query: 186 KGFQYKMRAVYAHFPINCVTTEGIQLL 266
F Y+++ Y HFP+ V EG +L+
Sbjct: 83 NPFVYRLKVCYTHFPMR-VKLEGNKLI 108
Score = 41.5 bits (93), Expect = 0.012
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +2
Query: 269 IRNFLGEK--YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV--K 433
+ NFLGEK I+ + V V + K + E+++E E A++I+QST K
Sbjct: 109 VENFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHK 168
Query: 434 NKDIRKFLDGLYVSEK 481
KD R+F DG+++ K
Sbjct: 169 RKDRRRFTDGIWLYYK 184
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
++TV GP+G L R+ + +D+ MV + V K+ LA T+ +H +NMI+GV
Sbjct: 21 VLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLEAHAKNMIRGVA 79
Query: 186 KGFQYKMRAVYAHFPI 233
G++Y+M+ VY+HFPI
Sbjct: 80 DGYEYRMKVVYSHFPI 95
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+EI NFLGEK R K+ GVTV DE+ I G E V ++AA I+ +T + +D
Sbjct: 104 LEITNFLGEKQPRIAKIIEGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRD 160
Query: 443 IRKFLDGLYVSEK 481
R F DG+Y++E+
Sbjct: 161 PRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 62.1 bits (144), Expect = 8e-09
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +3
Query: 12 TVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKG 191
T KGP+G ++R F + + I + ++ V+ K++ A V T SH++N+I GV++G
Sbjct: 25 TAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFASHLKNLIIGVSEG 83
Query: 192 FQYKMRAVYAHFPINCVTTEGIQLL 266
F+ KM VYAHFP+ V EG L+
Sbjct: 84 FECKMNIVYAHFPMQ-VKVEGKTLV 107
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +2
Query: 269 IRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 448
I NFLGEK R K+ G T V +E+++ G + EDV +AA I+Q T +K D R
Sbjct: 108 IGNFLGEKKPRIAKIL-GETKVKV--SGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPR 164
Query: 449 KFLDGLYVSEK 481
F DG+Y+ +K
Sbjct: 165 IFQDGIYIVQK 175
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/79 (35%), Positives = 51/79 (64%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+++ N +GEK IRR K+ PGV V + +++++EG+ + +V+ +AA I+ ST + D
Sbjct: 111 VQVSNLIGEKNIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYD 167
Query: 443 IRKFLDGLYVSEKTTVVLD 499
R F DG+Y+ +K + L+
Sbjct: 168 RRIFSDGIYIYKKEVIGLE 186
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/78 (30%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
++ VKGP+G + ++F + A IR+ +N + +E F +++ A + ++ +H++NMI G
Sbjct: 27 VLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLYSIIAHIKNMITGT 85
Query: 183 TKGFQYKMRAVYAHFPIN 236
G++Y ++ + HFPI+
Sbjct: 86 INGYRYYLKVISTHFPIS 103
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 LKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRA 212
L ++ HL +D N + WFG++K LA + T+ V+NMI GVT G++YKM
Sbjct: 41 LVKDLSHLKLDFEYDENDHQIVARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHF 100
Query: 213 VYAHFPINCVTTE 251
VY+HFPI +E
Sbjct: 101 VYSHFPIKHTCSE 113
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 266 EIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+ F+G K + V GV + N KDE+ IEG +LEDVS I Q T +K+KD
Sbjct: 119 DFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKD 178
Query: 443 IRKFLDGLYV 472
+RKFLDG+YV
Sbjct: 179 LRKFLDGIYV 188
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 59.3 bits (137), Expect = 6e-08
Identities = 30/87 (34%), Positives = 55/87 (63%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
+V VKGP G + + FK+ V + + + +++ +E + K+E A + T ++NM GVT
Sbjct: 29 IVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAILGTYKGILKNMFLGVT 87
Query: 186 KGFQYKMRAVYAHFPINCVTTEGIQLL 266
+G++YK++ +Y HFP+ V +G QL+
Sbjct: 88 RGWRYKLKVIYTHFPM-LVKVQGNQLV 113
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 59.3 bits (137), Expect = 6e-08
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +3
Query: 21 GPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 200
GP+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 201 KMRAVYAHFPINCVTTEGIQLL 266
++ VYAHFPI V EG +++
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI 127
Score = 52.0 bits (119), Expect = 8e-06
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +2
Query: 269 IRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 448
I NF+GEK+ RR K+ V S + ++ + G +E+ +AA ++Q+T +K KD R
Sbjct: 128 IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPR 184
Query: 449 KFLDGLYVSEK 481
F DG+Y+ +K
Sbjct: 185 VFQDGIYIVKK 195
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
VTV L R F+H +++R + L +V KKE A T +H+ NM +GV
Sbjct: 26 VTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAHLTNMARGVDS 84
Query: 189 GFQYKMRAVYAHFPINCVTTEGIQL 263
GF+YK++AVY+HFP+ + G Q+
Sbjct: 85 GFEYKLKAVYSHFPMT-IRVNGNQM 108
Score = 42.7 bits (96), Expect = 0.005
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 269 IRNFLGEKYIRRVKMAPG--VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+ N GEK + RV P V + K ++ + G E V +AA I++S +KN+D
Sbjct: 110 VTNLFGEK-VPRVAALPWSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRD 168
Query: 443 IRKFLDGLYVSEK 481
R F DG+Y+ K
Sbjct: 169 RRVFQDGIYIVSK 181
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIK 176
+ + KG G L + F + V+I + + L V ++ +K A VRT+ S + NMI
Sbjct: 23 KTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSIIYNMII 82
Query: 177 GVTKGFQYKMRAVYAHFPIN 236
GV+KGF Y ++ VY+HFPI+
Sbjct: 83 GVSKGFTYLLKIVYSHFPIS 102
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+EI N G K I + V V + K E+I+ +E + ++LIQ ++ NKD
Sbjct: 112 LEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKD 171
Query: 443 IRKFLDGLYVSEK 481
R F+DG+Y++ K
Sbjct: 172 CRVFIDGIYLASK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 55.6 bits (128), Expect = 7e-07
Identities = 28/86 (32%), Positives = 50/86 (58%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
+TV+G G + R + +D+ V+ + +E + K ++ + T SH+ENM GVT+
Sbjct: 21 ITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTE 79
Query: 189 GFQYKMRAVYAHFPINCVTTEGIQLL 266
G++Y M Y+HFP+ V EG +++
Sbjct: 80 GWEYGMEVFYSHFPMQ-VNVEGDEVV 104
Score = 52.0 bits (119), Expect = 8e-06
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
+ I NFLGEK RR + G T V +EL + G +E V +AA I+Q T + +KD
Sbjct: 103 VVIENFLGEKAPRRTTIH-GDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKD 159
Query: 443 IRKFLDGLYVSEK 481
+R F DG+Y++ K
Sbjct: 160 VRVFQDGVYITRK 172
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 55.2 bits (127), Expect = 9e-07
Identities = 25/74 (33%), Positives = 49/74 (66%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
VTVKGP+G + + F + V + + + ++ + ++++ A + + +++ENM KGVT+
Sbjct: 43 VTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKGVTE 101
Query: 189 GFQYKMRAVYAHFP 230
G +YK++ VY+HFP
Sbjct: 102 GHEYKLKLVYSHFP 115
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMIKG 179
+V VK RG L+R+F H+ +++R++ R L+V+KW + K LA T+ SHV+NMIK
Sbjct: 18 IVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMIKR 76
Query: 180 V 182
V
Sbjct: 77 V 77
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 53.2 bits (122), Expect = 4e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 263 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 442
I I NF GE+ R + V+ PK +D +++ G D++ +AA I+ +T VKNKD
Sbjct: 110 ILIENFQGERAPRSTHIMGNTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKD 166
Query: 443 IRKFLDGLYVSEK 481
R FLDG+YV EK
Sbjct: 167 HRVFLDGIYVYEK 179
Score = 52.0 bits (119), Expect = 8e-06
Identities = 26/87 (29%), Positives = 52/87 (59%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
++ +GP G +NF+++ V I + + ++ ++ K++ A + T S + N+ +G+
Sbjct: 27 MLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSIIRNICEGLV 85
Query: 186 KGFQYKMRAVYAHFPINCVTTEGIQLL 266
+G+ KM+ V+AHFPI V EG ++L
Sbjct: 86 EGYTIKMKVVFAHFPIT-VKVEGKKIL 111
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 49.6 bits (113), Expect = 4e-05
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = -1
Query: 493 HNSCFLRYIKTIQELSDILILDCSRLLDESSRARDIFQRVAFND*FILLFWRVNDSHTRC 314
+N R I TIQE +DIL+ D + LL+ SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 313 HLYPSDVFLTQEVTYLN 263
S+ F TQE++ N
Sbjct: 81 DFNFSNSFFTQEISNFN 97
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 48.8 bits (111), Expect = 8e-05
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 75 MVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEG 254
+V +K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G
Sbjct: 46 LVEDNKIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKG 104
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 4e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 155
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 156 HVENMIKGVTKG 191
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
Score = 39.5 bits (88), Expect = 0.048
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 320 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 448
GV + ++K+ LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 41.1 bits (92), Expect = 0.016
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 269 IRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 448
+ NFLGEK R K+ G V + D + I G + +AA I+++T +++ D R
Sbjct: 109 VENFLGEKSPRSAKIVDGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDAR 165
Query: 449 KFLDGLYV 472
F DG+++
Sbjct: 166 VFQDGIFL 173
Score = 40.3 bits (90), Expect = 0.027
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +3
Query: 15 VKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 194
+KG G R F+ V + +K+ +K V T S + +I+GVTKGF
Sbjct: 27 IKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGF 85
Query: 195 QYKMRAVYAHFPINCVTTEGIQLL 266
+Y M+ + HFP+ V+ G +L+
Sbjct: 86 EYHMKIDFTHFPMR-VSVRGDKLI 108
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 40.7 bits (91), Expect = 0.021
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +3
Query: 9 VTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWFGSKKELAAVR-TVCSHVENM 170
+ +KG G L N ++L VD R N ++K V K +K L A+R T SHV NM
Sbjct: 26 IKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRSSDEKRLKALRGTFTSHVRNM 84
Query: 171 IKGVTKGFQYKM 206
IKGVT+G++ ++
Sbjct: 85 IKGVTEGYKKEL 96
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 40.7 bits (91), Expect = 0.021
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
VTVKGP+G L R H + I + +L VE+ K+ A T S + NM+ GV+K
Sbjct: 24 VTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEHRALHGTTRSLINNMVIGVSK 81
Query: 189 GFQYKMRAV 215
GF+ + +
Sbjct: 82 GFEKSLEII 90
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 40.7 bits (91), Expect = 0.021
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
V VKGP+G L R F H ++I+ V +L V + K+ A T S + NM++GV+K
Sbjct: 25 VAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSK 82
Query: 189 GFQYKMRAV 215
GF+ + V
Sbjct: 83 GFERGLELV 91
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 40.3 bits (90), Expect = 0.027
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
+VTVKG +G L++ F + V+I + + ++ K K+E A T + + NM+KGVT
Sbjct: 24 VVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMHGTTRAIIANMVKGVT 81
Query: 186 KGFQYKMRAV 215
+GF+ + V
Sbjct: 82 EGFEKALEIV 91
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 39.5 bits (88), Expect = 0.048
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 RLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKKELAAVRTVCSHVENMIKG 179
+L++VKGP+G L+ H +V++ +V L+ G ++ A T + V NM++G
Sbjct: 22 QLLSVKGPKGTLELII-HSSVEVEIVEEAGELRFAARNGDQQTRAMAGTTRALVNNMVQG 80
Query: 180 VTKGFQYKMRAV 215
V++GF+ K++ V
Sbjct: 81 VSQGFERKLQLV 92
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 37.5 bits (83), Expect = 0.19
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
LV V+G RG L ++ K ++++++ N ++ V + F KK A S + NM+KGVT
Sbjct: 23 LVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHGLYRSLIFNMVKGVT 80
Query: 186 KGF 194
+GF
Sbjct: 81 EGF 83
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 37.1 bits (82), Expect = 0.26
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMIKGVT
Sbjct: 26 VTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMIKGVT 84
Query: 186 KGF 194
+GF
Sbjct: 85 EGF 87
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 36.7 bits (81), Expect = 0.34
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SHVENMIKGVT 185
VTVKGP+G LKR V + V+ ++ K++ +C + V NMI+GV+
Sbjct: 24 VTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQSRERHGLCRTLVANMIEGVS 80
Query: 186 KGFQYKMRAV 215
KG+ K+ V
Sbjct: 81 KGYSKKLEIV 90
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 35.1 bits (77), Expect = 1.0
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SHVENMIKGVT 185
+ VKGP+G L R+ L + ++ N ++L V + + + +C + V NM+ GV+
Sbjct: 24 IAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRPARQLHGLCRTLVANMVDGVS 80
Query: 186 KGFQYKMRAV 215
KGF+ ++ V
Sbjct: 81 KGFERRLELV 90
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 188
+ V G G L F H + ++ N + L V + + A + T CS + +MI GVT+
Sbjct: 26 ILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTTCSLINSMIVGVTE 84
Query: 189 GFQYKMRAV 215
GF K++ +
Sbjct: 85 GFVKKLQLI 93
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 34.3 bits (75), Expect = 1.8
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
+VTVKGP+G L R F ++IR V + + + SK+ T + + NM+ GV+
Sbjct: 23 VVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEMKTIHGTTRALLNNMVVGVS 80
Query: 186 KGF--QYKMRAV 215
+GF + +MR V
Sbjct: 81 EGFKKELEMRGV 92
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
+ V+GP+G L+ N H + + + R +K+++ A T+ + V+NMIKGVT
Sbjct: 26 IVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDRSFHKAIHGTMAALVKNMIKGVT 84
Query: 186 KGF 194
+GF
Sbjct: 85 EGF 87
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 33.9 bits (74), Expect = 2.4
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 6 LVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 182
++ +KGP G L + + DI ++ N + V++ KK A + NMIKGV
Sbjct: 31 IIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKKNRALHGLYRMLIYNMIKGV 87
Query: 183 TKGFQYKMRAVYAHFPINCVTTEGIQLLRYVTSWVRN 293
+ GF+ K+ + F N + Q+L + N
Sbjct: 88 SNGFKKKLELIGVGFRAN-INNNNNQILNLNIGYSHN 123
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 3.1
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 374 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 463
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 33.1 bits (72), Expect = 4.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 153 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGIQLLRY 272
+H+++ + GF Y+MR+VYA FP N + E ++ +
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEH 60
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 33.1 bits (72), Expect = 4.2
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC-SHVENMIKGVT 185
VTVKGP+G LKR V + V+ ++ +K+ +C + V NM+ GV+
Sbjct: 24 VTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRSSRERHGLCRTLVANMVIGVS 80
Query: 186 KGFQYKMRAV 215
+G+ K+ V
Sbjct: 81 QGYSKKLEIV 90
>UniRef50_A5N1Q3 Cluster: Predicted permease; n=1; Clostridium
kluyveri DSM 555|Rep: Predicted permease - Clostridium
kluyveri DSM 555
Length = 798
Score = 32.7 bits (71), Expect = 5.5
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 251 GYSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 349
GYS I+I N L EK ++K PGV + S KQ
Sbjct: 461 GYSDIQINNPLNEKLKEKIKAVPGVKGIKSFKQ 493
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 5.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 326 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 451
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 32.7 bits (71), Expect = 5.5
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 175 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 2
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
>UniRef50_A5EXI7 Cluster: Conserved hypothetical membrane protein;
n=1; Dichelobacter nodosus VCS1703A|Rep: Conserved
hypothetical membrane protein - Dichelobacter nodosus
(strain VCS1703A)
Length = 349
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 358 FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN*IPSVVTQLMG-K*AYTARILY 197
F+ W+++D+ C S + +T + N +P+ + QLM K AYT R LY
Sbjct: 192 FMQTHWQLDDNRALCIGSQSSMPITPTTHWQNRILPATIAQLMQLKNAYTLRELY 246
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 308 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTT 487
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 32.3 bits (70), Expect = 7.3
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 9 VTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVT 185
V + GP+G L + FK ++A+ ++ L V+ +K A T S + NMI GV
Sbjct: 24 VKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKNARAMWGTARSIICNMITGVK 80
Query: 186 KGFQYKM 206
+GF+ K+
Sbjct: 81 EGFKLKL 87
>UniRef50_UPI00015B4355 Cluster: PREDICTED: similar to oxidative
stress protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to oxidative stress protein - Nasonia
vitripennis
Length = 465
Score = 31.9 bits (69), Expect = 9.6
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -1
Query: 334 NDSHTRCHLYPSDVFLTQEVTYLNN*IPSVVTQLMGK*AYTARILYWKPLVTPLIMFSTC 155
ND+H + D + TYL + +V L GK +T + WK I+ +C
Sbjct: 18 NDNHAEIRRFAIDADVVTNFTYLREKLQTVFPDLRGK-RFT---ITWKDFENDEIVICSC 73
Query: 154 EQTVLTAA 131
E+ V+ A
Sbjct: 74 EELVIALA 81
>UniRef50_Q6AAS7 Cluster: Conserved protein; n=2;
Actinomycetales|Rep: Conserved protein -
Propionibacterium acnes
Length = 172
Score = 31.9 bits (69), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 251 GYSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSS 400
GYS++E+ N L E I V+ G+ VV Q ++ I+G D S
Sbjct: 110 GYSVVEVANKLRETIIDAVEYGTGLEVVEVNVQVTDVYIQGEDDHDDDQS 159
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,233,088
Number of Sequences: 1657284
Number of extensions: 9732222
Number of successful extensions: 24875
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 24219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24837
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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