Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0372
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 36 0.037
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 35 0.048
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 34 0.084
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 34 0.084
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 34 0.084
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 34 0.11
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 32 0.45
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 32 0.45
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.45
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 32 0.45
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 31 0.79
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 31 1.0
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 29 2.4
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 3.2
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 3.2
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 5.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 5.5
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 5.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 28 7.3
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 7.3
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 27 9.7
U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting... 27 9.7
U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting... 27 9.7
U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting... 27 9.7
U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting... 27 9.7
U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting... 27 9.7
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 27 9.7
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 35.5 bits (78), Expect = 0.037
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = -2
Query: 525 PRPRGTDGHVTDEHWARG-HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSL 352
P G G H G H+ H H G H H GH+G SH H G+ S
Sbjct: 536 PAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHG--SHGVHHGHHESH 593
Query: 351 GNNYRARYYDGRISNDHG 298
G+ + A + G +HG
Sbjct: 594 GHGHHAPAHHGH-HGEHG 610
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -2
Query: 513 GTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWA--RGHNG--GVSHDHRG 367
G H H GH+G HG H+ H H GH+G GV H H G
Sbjct: 565 GEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = -2
Query: 543 PQWRGQPRPRGTD-GHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWA--RGHNGG----- 388
P G GT GH + H A H+G +HG H GH + H GH+G
Sbjct: 513 PAHHGHHGEHGTHHGHHGEHHHAPAHHGHHG-EHGTHHGHHGSHHSPAHHGHHGEHHHAP 571
Query: 387 VSHDHRGYTRSLG 349
H H G+ S G
Sbjct: 572 AHHGHHGHHGSHG 584
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -2
Query: 504 GHVTDEHWARGHNGR-VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 367
GH + H A H+G SH HG H + H H+ H H G
Sbjct: 427 GHHGEHHHAPAHHGHHESHGHG-HHSPAHHGHHGEHHHAPAHHGHHG 472
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -2
Query: 489 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRSLGNNYRARYYDGRI 313
EH H+ +HG H GH H A H+G SH H ++ + ++ ++
Sbjct: 408 EHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAH 467
Query: 312 SNDHGRN 292
HG +
Sbjct: 468 HGHHGEH 474
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -2
Query: 474 GHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYTRSLGNNYRARYYDGRISNDHG 298
GH+G HG H + H H G H H G+ N++ ++ H
Sbjct: 668 GHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQHT 727
Query: 297 RNS 289
+ S
Sbjct: 728 KKS 730
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/49 (26%), Positives = 16/49 (32%)
Frame = -2
Query: 513 GTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 367
G H H G +G HG H + H H+ H H G
Sbjct: 472 GEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHG 520
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = -2
Query: 504 GHVTDEHWARGHNG-RVSHDHG-GHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRAR 331
GH + H A H+G H H H GH GH+G SH + G ++ A
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHG--SHHSPAHHGHHGEHHHAP 513
Query: 330 YYDGRISNDHG 298
+ G +HG
Sbjct: 514 AHHGH-HGEHG 523
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = -2
Query: 543 PQWRGQPRPRGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 367
P G G+ G H + GH G + H GH G H G G H H G
Sbjct: 571 PAHHGHHGHHGSHGVHHGHHESHGH-GHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHG 628
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -2
Query: 501 HVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYD 322
H EH H+G HG H H + H GH+GG H + + + +++
Sbjct: 637 HEHHEHHGDHHHGSHGVHHGHHGTHHSLAH--HGHHGGHGTHHGAHHSPAHHGHHGAHHE 694
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = -2
Query: 501 HVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARG--HNGGVSHDHRG 367
H E GH+ H H G H H G H+ H H G
Sbjct: 439 HGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHG 485
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = -2
Query: 489 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 310
+H H G HDHGGH H + H H G HDH + + + +G
Sbjct: 23 DHGGGDHGG---HDHGGHD-HGGHDHGGHDHGGWGGHDHHDHHHGGWGGHDHDHGNGGGG 78
Query: 309 NDHGRNSRLF 280
D+G R F
Sbjct: 79 GDNGWGYRPF 88
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -2
Query: 513 GTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDH 373
G H +H H G HDHGG GH + H G GG HDH
Sbjct: 30 GGHDHGGHDHGGHDHGG---HDHGGWGGHDHHDH-HHGGWGGHDHDH 72
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -2
Query: 474 GHNGRVSHDHGG------HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 319
G G SH HGG H H H+ G G H H Y+ S + YY G
Sbjct: 179 GGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYSGSSSDYSSNNYYGG 236
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -2
Query: 492 DEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDG 319
+E + G G HGGH G H G +GG H G+ RS + + Y G
Sbjct: 41 EEQRSTGGKGGGGGSHGGHGGSHGGSHGGHGSHGGSYGGHSGHGRSFSTSSGSSGYRG 98
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = -2
Query: 537 WRGQPRPRGTDGHVTDEHWARGH-NGRV-SHDHGGH---QGHVTNVHWARGHNGGVS-HD 376
W + ++GH+ H NG SHDH H GH + H + GH+ + HD
Sbjct: 335 WSAGEQVPYSNGHIHKSEGNHSHDNGHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHD 394
Query: 375 HRGYTRSLGNNYRARYYDGRISNDHGRN 292
H G++ N+ + N HG +
Sbjct: 395 H-GHSHGGNNDNHGHSHSAGSDNHHGHS 421
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.084
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = -2
Query: 537 WRGQPRPRGTDGHVTDEHWARGH-NGRV-SHDHGGH---QGHVTNVHWARGHNGGVS-HD 376
W + ++GH+ H NG SHDH H GH + H + GH+ + HD
Sbjct: 353 WSAGEQVPYSNGHIHKSEGNHSHDNGHGHSHDHNDHGHSHGHDDHGHDSHGHSHDHNEHD 412
Query: 375 HRGYTRSLGNNYRARYYDGRISNDHGRN 292
H G++ N+ + N HG +
Sbjct: 413 H-GHSHGGNNDNHGHSHSAGSDNHHGHS 439
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -2
Query: 546 GPQWRGQP-RPRGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDH 373
G + RG+ P G GH H +R + H HGGH GH + G +G G S H
Sbjct: 222 GVEHRGRSGSPGGRRGH-GGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHH 280
Query: 372 RG 367
RG
Sbjct: 281 RG 282
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Frame = -2
Query: 513 GTDGHVTDEHWARGHNGRVS------HDHGGHQGHVTNVHWARGHNG-GVSHDHRGYTRS 355
G+ H H G +G S H HGGH GH + G +G G S HRG
Sbjct: 276 GSGHHRGGRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH- 334
Query: 354 LGNNYRARYYDGRISNDHGRNSR 286
G + R G HG R
Sbjct: 335 -GGHGRHGSRSGSPGGRHGHGGR 356
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = -2
Query: 474 GHNGRVSHDH--GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNN--YRARYYDGRISN 307
GH GR H G H H + H RGH G H G++ ++DGR +
Sbjct: 352 GHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPS 411
Query: 306 DHGRN 292
HG +
Sbjct: 412 RHGHH 416
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 519 PRGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVS-HDHRGYTRSLGNN 343
PRG GH G +G S GG GH + H G +GG H R + +
Sbjct: 298 PRGRHGH-----GGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHG 352
Query: 342 YRARYYDGRISNDHGRN 292
+ R+ HGR+
Sbjct: 353 HGGRHGPPHCPGRHGRH 369
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 504 GHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYT 361
GH D H+ +HDH GH H H+ G +HDH G++
Sbjct: 79 GHAHDHDHGHAHDHGHAHDHHGH-SHDEE----EDHHHGHAHDHHGHS 121
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/101 (24%), Positives = 43/101 (42%)
Frame = -2
Query: 504 GHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYY 325
GH D H H+ H HG H + H GH+ G + +G+ Y+ Y
Sbjct: 93 GHAHDHH-GHSHDEEEDHHHGHAHDHHGHSHEDHGHSHGAES-----AKQVGDEYQ---Y 143
Query: 324 DGRISNDHGRNSRLFFNI*LFRFALSTGVALAASLMLIRMW 202
G +S + +RL+ +A+S + ++A+ I M+
Sbjct: 144 TGFLSFLNDAKTRLWV------YAISATLLISAAPCFILMF 178
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -2
Query: 537 WRGQPRPRGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARG-HNGGVSHDHRGYT 361
+RG R R H+ AR HN H+ G H G N + R H + H+
Sbjct: 45 YRGDRRHRSPGKHIAP---ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQD 101
Query: 360 RSLGNNY---RARYYDGRISNDHGRN 292
RS +N R + +D GRN
Sbjct: 102 RSRHHNQDRNRRQNHDRNRHQSQGRN 127
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.45
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = -2
Query: 537 WRGQPRPRGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARG-HNGGVSHDHRGYT 361
+RG R R H+ AR HN H+ G H G N + R H + H+
Sbjct: 889 YRGDRRHRSPGKHIAP---ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQD 945
Query: 360 RSLGNNY---RARYYDGRISNDHGRN 292
RS +N R + +D GRN
Sbjct: 946 RSRHHNQDRNRRQNHDRNRHQSQGRN 971
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -2
Query: 513 GTDGHVTDEHWARGHNGRVSHDHGGHQG--HVTNVHWARGHNGGVSH 379
G GHV H H+G HGGH G H + H + H G H
Sbjct: 41 GHHGHVDTHHHEESHHG---EHHGGHHGVQHYESHHESHHHGGHHGH 84
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 459 VSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 367
V H GGH GHV H H+G H G
Sbjct: 35 VVHTDGGHHGHVDTHHHEESHHGEHHGGHHG 65
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -2
Query: 507 DGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 358
+GH+ + GH R S H GHQ + H GH + DH + +
Sbjct: 134 EGHIVAKDDHHGHEKRSSDSHHGHQKRSVDEH--HGHQKKNAEDHHEHQK 181
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -2
Query: 486 HWARGHNGRVSHDH--GGHQGHV-TNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGR 316
H A G+ H H GGH GH+ T+ H H+GG H G+ G +Y + Y
Sbjct: 25 HGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGG---HHGGHH---GGHYESHYESHH 78
Query: 315 ISNDHGRN 292
HG +
Sbjct: 79 HHGHHGHH 86
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -2
Query: 519 PRGTDGHVTDEHWARGHN---GRVSHDH--GGHQGH 427
P G D H D+H GH+ GR HDH G H GH
Sbjct: 110 PGGVDVH--DDHHHDGHHKKHGRKEHDHHHGHHHGH 143
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = -2
Query: 543 PQWRGQPRP-RGTDGH--VTDEHWARGHNGRV---SHDHGGHQGHVTNVHWARG-HNGGV 385
P W+ + + T GH V ++ RG GR + +GG+ + H RG +NGG
Sbjct: 254 PDWKKERETNQETFGHNAVRSLNYRRGFGGRGRGGNRGYGGYNNGYQHQHQHRGGYNGGY 313
Query: 384 SHDHRGYTR 358
++ GY R
Sbjct: 314 RQNNGGYRR 322
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 450 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 292
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 450 DHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR-ARYYDGRISNDHGRN 292
+H Q H ++R N G ++H G R NN R R Y+ R ++++ +N
Sbjct: 46 NHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQN 99
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = -2
Query: 489 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 310
++W G N + GG G +N W G N ++ R NN Y + +
Sbjct: 198 DNWNSGSNSGGYNGGGGGSGGGSN--WNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 309 NDHGRNS 289
ND+ NS
Sbjct: 256 NDNDGNS 262
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = -2
Query: 489 EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 310
++W G N + GG G +N W G N ++ R NN Y + +
Sbjct: 198 DNWNSGSNSGGYNGGGGGSGGGSN--WNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGT 255
Query: 309 NDHGRNS 289
ND+ NS
Sbjct: 256 NDNDGNS 262
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 501 HVTDEHWARGHNGRVSHDHGGHQGH 427
H EH + H+ SH H H+GH
Sbjct: 61 HQDGEHHEQHHDAHDSHAHDSHEGH 85
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -3
Query: 404 GATMAGSATITGATLGPSATITG----LGTMMAGSAMITGETAGFSST 273
G+T+ G +T++G+T S+ TG G+ ++GS+ T ++ SST
Sbjct: 1021 GSTVTGESTVSGSTASTSSGSTGSSTEAGSTVSGSSASTVTSSTGSST 1068
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -3
Query: 404 GATMAGSATITGATLGPSAT---ITGLGTMMAGS-AMITGET 291
G+T++GS TG+T P +T TG+ T+ S + I+G T
Sbjct: 766 GSTVSGSTGSTGSTNNPGSTDSSTTGISTVSGSSLSTISGST 807
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 307
+ G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 484 SNGSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 540
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG-NNYRARYYDGRISN 307
+ G NGR ++ G TN + + HN +H G R G N + Y +G+ SN
Sbjct: 386 SNGSNGRWRGNN--RNGATTNGYGYQQHNNRQNHYQNGQQRENGENGHHNHYQNGQSSN 442
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Frame = -2
Query: 516 RGTDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR-----SL 352
R + H + R +GR GGHQG+ N + R + S D+ G +R
Sbjct: 36 RRREDHNSSYQSYRRPDGRQDSYGGGHQGNHGNSYGRREDDRSHSRDNHGGSRYGERDDR 95
Query: 351 GNNYRA---RYYDGRISNDHGRNSR 286
GNN R+ RY + D R +
Sbjct: 96 GNNGRSADNRYSQSNYNYDSNRGGQ 120
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -2
Query: 474 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 337
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 76 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 125
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -2
Query: 474 GHNGRVSH-DHGGHQGHVTNVHWAR---GHNGGVSHDHRGYTRSLGNNYR 337
GH +V DHG HQ T+ ++ G GG +HR Y +S Y+
Sbjct: 580 GHIDKVPRGDHGDHQEMDTSTTSSKSGGGGGGGHQKNHRKYDQSSSQRYQ 629
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -2
Query: 186 CPGTRGPTWTGDGTMGAST----RAXPTSGLS*CP 94
CP T G T T +ST R PT+G+S CP
Sbjct: 171 CPRTCGRCSTSSSTTSSSTTCADRVNPTTGVSDCP 205
>U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting
protein protein16, isoform g protein.
Length = 375
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 109 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 164
>U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting
protein protein16, isoform k protein.
Length = 657
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 391 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 446
>U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting
protein protein16, isoform c protein.
Length = 706
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 440 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 495
>U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting
protein protein16, isoform a protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 397 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 452
>U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting
protein protein16, isoform b protein.
Length = 603
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 337 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 392
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 480 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-HRGYT--RSLGNNYRARYYDG 319
+R H+G H GG+QGH ++ GH GG +R T R NNY + G
Sbjct: 450 SRHHSGWEGHT-GGYQGHRSSSLSRGGHGGGGQETYYRQETTRRQQHNNYDDNFNRG 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,099
Number of Sequences: 27780
Number of extensions: 193103
Number of successful extensions: 823
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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