Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0370
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical ...    31   0.64 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    30   1.5  
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    29   2.6  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical
           protein Y44A6D.3 protein.
          Length = 229

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 327 SGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQ 449
           +   R+   S H  G   +NN+NN+    NHNH   NNNIQ
Sbjct: 68  AAAARLNAQSSHSSGPARLNNMNNN-NNNNHNH-SKNNNIQ 106


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/44 (38%), Positives = 29/44 (65%)
 Frame = +1

Query: 124 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTA 255
           RI+GG++ + GA+  +A LV    NG+  +CGA+++ +   VTA
Sbjct: 37  RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTA 79


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +1

Query: 124 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTA 255
           R+VGG     GA P  A L    T      CGAS+L  T  +TA
Sbjct: 26  RVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITA 67


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 184 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 65
           SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 184 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 65
           SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 350 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 264
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 350 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 264
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
            C05C9.3 protein.
          Length = 1225

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 378  NMNNLNNDVAIINHNHVGFNNNIQRINLASGNNN 479
            N NN N D    NHNH      + + ++   NNN
Sbjct: 1182 NFNNPNRDFQYPNHNHQHVQYQLHQQHMTVRNNN 1215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,051,004
Number of Sequences: 27780
Number of extensions: 294637
Number of successful extensions: 1065
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)