Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0368
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 265 3e-71
03_01_0547 + 4093196-4093657,4094267-4095148 265 3e-71
03_01_0544 + 4082528-4082989,4083585-4084466 265 3e-71
03_01_0543 + 4076981-4077442,4078145-4079026 265 3e-71
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 138 5e-33
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 138 5e-33
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 127 9e-30
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 123 1e-28
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 121 5e-28
02_04_0462 + 23131433-23132836 76 2e-14
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 73 2e-13
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 40 0.001
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 37 0.013
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.039
04_01_0103 + 1082077-1082167,1083037-1085477 34 0.12
02_04_0017 + 18937774-18937864,18938505-18940945 34 0.12
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.37
01_06_0662 + 30987187-30987277,30987825-30990214 32 0.37
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.49
02_04_0148 - 20198407-20201424 32 0.49
03_05_0511 + 25056018-25059107 31 1.1
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.5
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 29 2.6
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.6
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 29 2.6
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 29 3.4
01_01_0016 - 88825-90411 29 3.4
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 6.0
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 28 7.9
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 7.9
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 7.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 265 bits (649), Expect = 3e-71
Identities = 131/211 (62%), Positives = 154/211 (72%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHL ++ + + R + +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
+ K TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 584 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+GYNP + FVPISG+ GDNM+E ST + W+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWY 211
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 265 bits (649), Expect = 3e-71
Identities = 131/211 (62%), Positives = 154/211 (72%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHL ++ + + R + +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
+ K TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 584 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+GYNP + FVPISG+ GDNM+E ST + W+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWY 211
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 265 bits (649), Expect = 3e-71
Identities = 131/211 (62%), Positives = 154/211 (72%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHL ++ + + R + +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
+ K TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 584 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+GYNP + FVPISG+ GDNM+E ST + W+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWY 211
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 265 bits (649), Expect = 3e-71
Identities = 131/211 (62%), Positives = 154/211 (72%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
MGKEKTHINIVVIGHVDSGKSTTTGHL ++ + + R + +
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 GQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
+ K TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
G FEAGISK+GQTREHALLAFTLGVKQ+I NKM YS+ R++EI KEVSSY+KK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Query: 584 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+GYNP + FVPISG+ GDNM+E ST + W+
Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWY 211
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 138 bits (333), Expect = 5e-33
Identities = 78/207 (37%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHL-HLQMWWY*QTYHR---EVREGGPGNG*RILQICLGIG 226
+ +N+ ++GHVDSGKST +G L HL + H+ E +E G G+ +
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGS----FAYAWAMD 301
Query: 227 QTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
++ T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG
Sbjct: 302 ESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
Query: 407 EFEAGISKN-----GQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
FEAG+ GQT+EHA L + GV+QLIV VNKM + YS+ RFE IK ++ S
Sbjct: 362 SFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGS 419
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLE 652
+++ + ++V ++P+S N+++
Sbjct: 420 FLRSCNFKDSSVTWIPLSAVENQNLIK 446
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 138 bits (333), Expect = 5e-33
Identities = 78/207 (37%), Positives = 123/207 (59%), Gaps = 9/207 (4%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHL-HLQMWWY*QTYHR---EVREGGPGNG*RILQICLGIG 226
+ +N+ ++GHVDSGKST +G L HL + H+ E +E G G+ +
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGS----FAYAWAMD 301
Query: 227 QTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
++ T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG
Sbjct: 302 ESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTG 361
Query: 407 EFEAGISKN-----GQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
FEAG+ GQT+EHA L + GV+QLIV VNKM + YS+ RFE IK ++ S
Sbjct: 362 SFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGS 419
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLE 652
+++ + ++V ++P+S N+++
Sbjct: 420 FLRSCNFKDSSVTWIPLSAVENQNLIK 446
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 127 bits (306), Expect = 9e-30
Identities = 62/131 (47%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 436
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 77
Query: 437 QTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYN-PAAVAF 613
QTREH LLA TLGV +L+V +NKM +S+ R++EI+ ++ ++K GYN V F
Sbjct: 78 QTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHF 137
Query: 614 VPISGWHGDNM 646
+PISG G NM
Sbjct: 138 LPISGLLGTNM 148
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 123 bits (297), Expect = 1e-28
Identities = 57/133 (42%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN- 433
T+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N
Sbjct: 299 TMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGING 358
Query: 434 -GQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVA 610
GQT+EH+ L + GV LIV VNKM + YS+ RF IK ++ ++++ GY +AVA
Sbjct: 359 IGQTKEHSQLVRSFGVDNLIVVVNKMDSV--EYSKERFNFIKSQLGAFLRSCGYKDSAVA 416
Query: 611 FVPISGWHGDNML 649
+VPIS +N++
Sbjct: 417 WVPISAMENENLM 429
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 189 MGKGSFKYAWVLDKLKAERERG 254
+GKGSF YAW +D+ ERERG
Sbjct: 276 IGKGSFAYAWAMDESADERERG 297
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 121 bits (292), Expect = 5e-28
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 424
T+++ FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGY 118
Query: 425 SKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYN-PA 601
K GQTREH LLA TLGV +LIV +NKM +S+ R++EI+ ++ +++ GYN
Sbjct: 119 EKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKK 178
Query: 602 AVAFVPISGWHGDNM 646
V F+PISG G NM
Sbjct: 179 DVHFLPISGLLGSNM 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 126 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 254
++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G
Sbjct: 15 LFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKG 57
>02_04_0462 + 23131433-23132836
Length = 467
Score = 76.2 bits (179), Expect = 2e-14
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Frame = +2
Query: 41 KMGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLG 220
K + K H+NI IGHVD GK+T T L + + V P I
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVL--------ASVGGSAPKKYDEI--DAAP 112
Query: 221 IGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 400
+ +G TI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 113 EERARG-----ITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 401 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFE-EIKKEVSSY 574
G QT+EH LLA +GV +++V +NK ++ E E+++ +SSY
Sbjct: 168 DGPMP-------QTKEHILLAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSY 219
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 72.9 bits (171), Expect = 2e-13
Identities = 58/198 (29%), Positives = 90/198 (45%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQ 229
+ K H+N+ IGHVD GK+T T + + + E G +I +
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT-----------KVLAEAGKAKAVAFDEIDKAPEE 111
Query: 230 TKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
TI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 112 KA----RGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGP 167
Query: 410 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIG 589
QT+EH LLA +GV L+ +NK+ ++ E +E+ S+ K G
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPG 220
Query: 590 YNPAAVAFVPISGWHGDN 643
+ +S G N
Sbjct: 221 DEIPIIRGSALSALQGTN 238
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/130 (27%), Positives = 57/130 (43%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTKG*A* 247
NI + H+DSGK+T T ++ +Y H E+ E +G + + + KG
Sbjct: 70 NIGISAHIDSGKTTLTE----RVLYYTGRIH-EIHEVRGRDGVGAKMDSMDLEREKG--- 121
Query: 248 AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 427
TI A + Y V IID PGH DF + D A+L++ + G I+
Sbjct: 122 --ITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 179
Query: 428 KNGQTREHAL 457
+ Q R + +
Sbjct: 180 VDRQMRRYEI 189
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
M K+ N+ VI HVD GKST T L Q +VR R + GI
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDT----RADEAERGI 68
Query: 224 G-QTKG*A*AWFTIDIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
++ G + + D AL FE + Y + +ID+PGH DF + D A+++
Sbjct: 69 TIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVV 128
Query: 389 V 391
V
Sbjct: 129 V 129
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/93 (24%), Positives = 43/93 (46%)
Frame = +2
Query: 299 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 478
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 479 KQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYI 577
+ +I+ NK+ + + + E I+K + I
Sbjct: 203 QHIIILQNKIDLIQEGAAMNQHEAIQKFIQGTI 235
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 33.9 bits (74), Expect = 0.12
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Frame = +2
Query: 17 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG 193
+F + + ++ +K +I N+ VI HVD GKST T L Q +VR
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDT--- 59
Query: 194 *RILQICLGIG-QTKG*A*AWFTID--IALWKFET--SKYYVTIIDAPGHRDFIKNMITG 358
R + GI ++ G + + D + L+K E ++Y + +ID+PGH DF +
Sbjct: 60 -RADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAA 118
Query: 359 TSQADCAVLIV 391
D A+++V
Sbjct: 119 LRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 33.9 bits (74), Expect = 0.12
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Frame = +2
Query: 17 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG 193
+F + + ++ +K +I N+ VI HVD GKST T L Q +VR
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDT--- 59
Query: 194 *RILQICLGIG-QTKG*A*AWFTID--IALWKFET--SKYYVTIIDAPGHRDFIKNMITG 358
R + GI ++ G + + D + L+K E ++Y + +ID+PGH DF +
Sbjct: 60 -RADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAA 118
Query: 359 TSQADCAVLIV 391
D A+++V
Sbjct: 119 LRITDGALVVV 129
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 296 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
Y I+D PGH +F M AD AVL+V A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 32.3 bits (70), Expect = 0.37
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGI 223
M K+ N+ V+ HVD GKST T L Q +VR + I +
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITI-- 70
Query: 224 GQTKG*A*AWFTIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
++ G + + D +L + + ++Y + +ID+PGH DF + D A+++V
Sbjct: 71 -KSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+T +D PGH F G + D VL+VAA G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.9 bits (69), Expect = 0.49
Identities = 30/113 (26%), Positives = 48/113 (42%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTKG*A* 247
N ++ HVD GK++ HL R V E G+ R++ L Q +
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYG-----SERRVSERMAGSA-RVMDH-LEEEQRRAITM 70
Query: 248 AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+I + + + V +ID+PGH DF + AD A+++V A G
Sbjct: 71 KSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 284 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ Y + +ID PGH DF + + A+L+V A G
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG 170
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 296 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ ++D PGH DF + + AVL+V AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 493 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 374
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +3
Query: 132 KCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGSQSILLSGSSK---LASTM 302
KC I + F K+A + W + KLK + ++IL GS+ L +T+
Sbjct: 302 KCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILCQGSNDEMLLKTTV 361
Query: 303 LPSLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKL 419
L+ E E LR IALC+ +P+ K+
Sbjct: 362 RRYLIDCLFECDEGDLPDEALRAIALCNQ---MPLRQKI 397
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 56 KTHINIVVIGHVDSG 100
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 424 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 290
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,289,892
Number of Sequences: 37544
Number of extensions: 411266
Number of successful extensions: 1147
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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