Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0368
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 280 8e-76
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 280 8e-76
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 140 1e-53
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 198 3e-51
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 152 3e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 84 8e-17
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 73 2e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 73 2e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 72 3e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 72 3e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 72 3e-13
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.009
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.061
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.14
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.25
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.33
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.43
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.43
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.00
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 1.00
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.3
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 28 5.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 28 7.0
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 28 7.0
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 28 7.0
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 280 bits (686), Expect = 8e-76
Identities = 144/215 (66%), Positives = 161/215 (74%), Gaps = 4/215 (1%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 392 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
A GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKM +SE RF EI EVS
Sbjct: 117 ACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSG 176
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+IKKIGYNP AV FVPISG++GDNMLE S+ MPWF
Sbjct: 177 FIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWF 211
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 280 bits (686), Expect = 8e-76
Identities = 144/215 (66%), Positives = 161/215 (74%), Gaps = 4/215 (1%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 392 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
A GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKM +SE RF EI EVS
Sbjct: 117 ACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSG 176
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
+IKKIGYNP AV FVPISG++GDNMLE S+ MPWF
Sbjct: 177 FIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWF 211
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 140 bits (338), Expect(2) = 1e-53
Identities = 74/121 (61%), Positives = 86/121 (71%), Gaps = 4/121 (3%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 392 A 394
A
Sbjct: 117 A 117
Score = 88.2 bits (209), Expect(2) = 1e-53
Identities = 41/64 (64%), Positives = 47/64 (73%)
Frame = +2
Query: 485 LIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 664
L+V NKM +SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 665 MPWF 676
MPWF
Sbjct: 174 MPWF 177
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 198 bits (483), Expect = 3e-51
Identities = 103/153 (67%), Positives = 116/153 (75%), Gaps = 4/153 (2%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 392 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 490
A GTGEFEAGISKNGQTREHALLA TLGVKQL+
Sbjct: 117 ACGTGEFEAGISKNGQTREHALLAQTLGVKQLV 149
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 549 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGS 677
+S + P +SRR T Q L D TETTC C GS
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGS 194
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 159 bits (386), Expect = 2e-39
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQT 232
+K IN++V+GHVD+GKST GHL + + + NG + +T
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 233 KG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 412
+ T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 413 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYI-KKIG 589
E G GQT+EHALL +LGV QLIV VNK+ ++ +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 590 YNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
++ FVP+SG+ G+N+++ ++ W+
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWY 370
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 159 bits (386), Expect = 2e-39
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQT 232
+K IN++V+GHVD+GKST GHL + + + NG + +T
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 233 KG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 412
+ T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 413 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYI-KKIG 589
E G GQT+EHALL +LGV QLIV VNK+ ++ +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 590 YNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
++ FVP+SG+ G+N+++ ++ W+
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWY 388
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 152 bits (368), Expect = 3e-37
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Frame = +2
Query: 47 GKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQIC 214
G K HIN+V +GHVD+GKST G L + Y RE +E G + L C
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESW--YLSWC 161
Query: 215 LGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 394
+ + T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++
Sbjct: 162 MDTNDEE--REKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVIS 219
Query: 395 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSY 574
A GEFE G + GQTREH++L T GVK L++ VNKM + E RF+EI+ +++ +
Sbjct: 220 ARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPF 279
Query: 575 IKKIGYNPAA-VAFVPISGWHG 637
++K+G+NP + +VP SG G
Sbjct: 280 LRKLGFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +3
Query: 126 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 245
IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 28 IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHL 124
MGKEK HINIVVIGHVDSGKSTTTGHL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/150 (35%), Positives = 76/150 (50%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTK 235
K ++N+ IGH+D GK+T T + R + G + +I G + K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT-----------RVQAKKGFAKHIKFDEIDKGKEEKK 91
Query: 236 G*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 415
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 ----RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 416 AGISKNGQTREHALLAFTLGVKQLIVGVNK 505
QT+EH +LA +GVK + + +NK
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINK 170
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/150 (35%), Positives = 76/150 (50%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTK 235
K ++N+ IGH+D GK+T T + R + G + +I G + K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAIT-----------RVQAKKGFAKHIKFDEIDKGKEEKK 91
Query: 236 G*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 415
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 92 ----RGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME 147
Query: 416 AGISKNGQTREHALLAFTLGVKQLIVGVNK 505
QT+EH +LA +GVK + + +NK
Sbjct: 148 -------QTKEHLILAKQVGVKNMAIFINK 170
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 72.1 bits (169), Expect = 3e-13
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQ 229
++K H+N+ IGHVD GK+T T + ++ G R + +
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAI------------TKILATSKGAKYRKYEDIDNAPE 92
Query: 230 TKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
K TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKA---RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 410 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
QTREH LLA +GV ++V +NK+ + +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVDEVPD--AETR-ELVEMDIREQLNE 199
Query: 584 IGY 592
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 72.1 bits (169), Expect = 3e-13
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQ 229
++K H+N+ IGHVD GK+T T + ++ G R + +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAI------------TKILATSKGAKYRKYEDIDNAPE 93
Query: 230 TKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
K TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKA---RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 410 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
QTREH LLA +GV ++V +NK+ + +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVDEVPD--AETR-ELVEMDIREQLNE 200
Query: 584 IGY 592
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 72.1 bits (169), Expect = 3e-13
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQ 229
++K H+N+ IGHVD GK+T T + ++ G R + +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAI------------TKILATSKGAKYRKYEDIDNAPE 93
Query: 230 TKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 409
K TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKA---RGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 410 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKK 583
QTREH LLA +GV ++V +NK+ + +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVDEVPD--AETR-ELVEMDIREQLNE 200
Query: 584 IGY 592
GY
Sbjct: 201 FGY 203
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 481
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 482 QLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 652
++I+ +NK + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKC----DLAEKSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 481
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 482 QLIVGVNKM 508
QL+V VNK+
Sbjct: 258 QLVVAVNKI 266
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +2
Query: 299 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 478
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 479 KQLIVGVNKMIPLNHHYSEPRFEEI 553
L++ NK+ + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 504 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 376
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 487
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 488 IVGVNKMIPLNHHYSEPR 541
++ +NK+ L + S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 296 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 475
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 476 VKQLIVGVNKM 508
+ Q+I +NK+
Sbjct: 155 I-QIIPVINKI 164
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.43
Identities = 31/113 (27%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTKG*A* 247
N+ + GH+ GK+T L Q + + Y E + R I L I + +G +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLMEQT--HPEFYRAEDADA------RFTDI-LFIEKQRGCSI 184
Query: 248 AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.43
Identities = 31/113 (27%), Positives = 47/113 (41%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTKG*A* 247
N+ + GH+ GK+T L Q + + Y E + R I L I + +G +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLMEQT--HPEFYRAEDADA------RFTDI-LFIEKQRGCSI 59
Query: 248 AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 20 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL 124
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 20 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL 124
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHL 124
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHL 124
M +++ N+ VI HVD GKST T L
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 248
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 567 PHTSRRLATTQLLSLSCPFLD 629
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 567 PHTSRRLATTQLLSLSCPFLD 629
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 567 PHTSRRLATTQLLSLSCPFLD 629
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 567 PHTSRRLATTQLLSLSCPFLD 629
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 509 IPLNHHYSEPRFEEIKKEV 565
+PL HHY P +E +K V
Sbjct: 29 LPLQHHYHRPHYESLKSSV 47
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 28.3 bits (60), Expect = 5.3
Identities = 29/113 (25%), Positives = 46/113 (40%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLHLQMWWY*QTYHREVREGGPGNG*RILQICLGIGQTKG*A* 247
NI VI HVD+GK+T T L L + + G + + L I + +G
Sbjct: 27 NIGVIAHVDAGKTTVTERL-LYL-------AGAIHVAGHVDKGNTVTDFLDIERERG--- 75
Query: 248 AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
T+ A + + + +ID PGH DF + D V+++ G
Sbjct: 76 --ITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 302 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 397
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 515 LNHHYSEPRFEEIKKEVSSYIKKIGY 592
L+ Y PR E I++EVS K +GY
Sbjct: 114 LSKDYEFPRHERIEEEVSQIFKGLGY 139
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 515 LNHHYSEPRFEEIKKEVSSYIKKIGY 592
L+ Y PR E I++EVS K +GY
Sbjct: 114 LSKDYEFPRHERIEEEVSQIFKGLGY 139
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 440 TREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPA 601
T EHA+ T + I V+K PL HHY+E R V + I+ + P+
Sbjct: 172 TPEHAI---TSEAPEPISEVSKATPLEHHYAEERVYPTMGSVQAPIEFVEVLPS 222
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -2
Query: 487 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 329
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 328 VSRSINDGNI 299
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,912,789
Number of Sequences: 27780
Number of extensions: 333101
Number of successful extensions: 1005
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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