Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0368
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 316 2e-88
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 307 8e-86
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 274 5e-76
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 270 6e-75
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 6e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 2.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 4.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 6.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 316 bits (775), Expect = 2e-88
Identities = 162/215 (75%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 116
Query: 392 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM YSE RFEEIKKEVSS
Sbjct: 117 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSS 176
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
YIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWF
Sbjct: 177 YIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 211
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 307 bits (753), Expect = 8e-86
Identities = 157/215 (73%), Positives = 170/215 (79%), Gaps = 4/215 (1%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLHLQMWWY*----QTYHREVREGGPGNG*RILQI 211
MGKEK HINIVVIGHVDSGKSTTTGHL + + + +E +E G G+ +
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS----FKY 56
Query: 212 CLGIGQTKG*A*AWFTIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 391
+ + K TIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 116
Query: 392 AAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSS 571
AAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM + YSE RFEEIKKEVSS
Sbjct: 117 AAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSS 176
Query: 572 YIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 676
YIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+
Sbjct: 177 YIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWY 211
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 274 bits (672), Expect = 5e-76
Identities = 131/140 (93%), Positives = 132/140 (94%)
Frame = +2
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 436
TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 74
Query: 437 QTREHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 616
QTREHALLAFTLGVKQLIVGVNKM YSE RFEEIKKEVSSYIKKIGYNPAAVAFV
Sbjct: 75 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFV 134
Query: 617 PISGWHGDNMLEPSTKMPWF 676
PISGWHGDNMLE S+KMPWF
Sbjct: 135 PISGWHGDNMLEVSSKMPWF 154
Score = 31.9 bits (69), Expect = 0.006
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 216 WVLDKLKAERERG 254
WVLDKLKAERERG
Sbjct: 1 WVLDKLKAERERG 13
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 270 bits (663), Expect = 6e-75
Identities = 129/138 (93%), Positives = 130/138 (94%)
Frame = +2
Query: 263 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 442
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 443 REHALLAFTLGVKQLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 622
REHALLAFTLGVKQLIVGVNKM YSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 623 SGWHGDNMLEPSTKMPWF 676
SGWHGDNMLE S+KMPWF
Sbjct: 121 SGWHGDNMLEVSSKMPWF 138
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.1 bits (77), Expect = 6e-04
Identities = 36/117 (30%), Positives = 52/117 (44%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 481
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 482 QLIVGVNKMIPLNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE 652
+IV +NK+ N + ++E K + I+++G + V IS G N+ E
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRE 298
Score = 25.4 bits (53), Expect = 0.50
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKST 109
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 65 INIVVIGHVDSGKST 109
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.4 bits (48), Expect = 2.0
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 568 GYFLLDFLKSGLTVMVVQWNHF 503
G+F++D+ + ++V+ W F
Sbjct: 232 GFFMMDYYIPSILIVVISWVSF 253
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 287 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = +2
Query: 515 LNHHYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 622
L+++Y+ + ++Y KK+ YN + +P+
Sbjct: 85 LSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 4.7
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -2
Query: 568 GYFLLDFLKSGLTVMVVQWNHFVYSYDELFDTEGESEQGMLTGLTVLRDT 419
GYFL+ + ++V+ W F + D G +LT T+ D+
Sbjct: 245 GYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDS 294
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 57 FSLPIFG*SRITNCV 13
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 664 FG*RLQHVVSVPSRNGHESDSSWV 593
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,631
Number of Sequences: 438
Number of extensions: 4111
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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