Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0366
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.8  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  LQNEIANCPRTHWSGGRRI 80
           LQNE A C   H  G R++
Sbjct: 67  LQNECAKCNEKHKEGVRKV 85


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 24  LQNEIANCPRTHWSGGRRI 80
           LQNE A C   H  G R++
Sbjct: 68  LQNECAKCNEKHKEGVRKV 86


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 62  ERRPPHQSNPSKSRISQYRNTKASTLECTSSP 157
           ++ PPHQ  P + + +Q +    +T     SP
Sbjct: 200 QQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 231


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 62  ERRPPHQSNPSKSRISQYRNTKASTLECTSSP 157
           ++ PPHQ  P + + +Q +    +T     SP
Sbjct: 202 QQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 233


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 21  NLQNEIANCPRTHWSGGRRINQTRPNRGYPNTEIRKHR 134
           +L +  ANCP +     + ++  RP+ G    ++RK R
Sbjct: 88  HLGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKPR 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,337
Number of Sequences: 336
Number of extensions: 2885
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)