Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0365
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z69383-1|CAA93412.1|  409|Caenorhabditis elegans Hypothetical
           protein F13E9.4 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = -3

Query: 614 RRQAPVWG*ERRGFRADAREGEHRWLGLCWGCG*RQNGLQLSISLSGFDGAS--GSHSYD 441
           ++Q P  G +  GF      G     G   G G  QNG       SGF G S  GS+S  
Sbjct: 120 QQQRPQQGFQSNGFSGQQASGSMNSFGGQGGYGQNQNGFG---GQSGFSGQSGWGSNSLS 176

Query: 440 SNESN 426
           S  SN
Sbjct: 177 SANSN 181


>AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical
           protein Y41D4B.16 protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -3

Query: 500 LQLSISLSGFDGASGSHSYDSNESNEEFH 414
           + L++ LSG  GA+ S++   ++ N++FH
Sbjct: 304 VNLTVQLSGQSGATDSYTTSGSQVNDDFH 332


>Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical
           protein T23D8.3 protein.
          Length = 410

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 315 REPRGTTT*AIKRIDMGTEEPDV 383
           +EPRG +  A+KR D   EE D+
Sbjct: 306 KEPRGLSRKALKRFDKAVEEMDI 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,606,815
Number of Sequences: 27780
Number of extensions: 205053
Number of successful extensions: 387
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)